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PMID: 10618068 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Relationship of incremental specimen volumes and enhanced detection of human immunodeficiency virus type 1 RNA with nucleic acid amplification technology.

Journal of clinical microbiology ·Vol. 38 ·No. 1 ·2000-01-00 ·Pages 85-9

Witt DJ, Kemper M, Stead A, Ginocchio CC, Caliendo AM

Abstract

The relationship between specimen input volume and the frequency of reported human immunodeficiency virus type 1 (HIV-1) RNA copy numbers by nucleic acid amplification technology (the NASBA HIV-1 RNA QT system) was investigated. Results obtained with both clinical specimens and dilution panels indicated that both the absolute number of reported results and the reported HIV-1 RNA copy number were directly proportional to the specimen input volumes evaluated (0.1, 0.5, and 1.0 ml). Conversion of the reported HIV-1 RNA copy numbers to a constant 1.0-ml volume indicated that the numerical relationship among the specimen input volumes and the HIV-1 RNA copy numbers was multiplicative. The HIV-1 RNA copy numbers reported for the 0.5-ml input volume were approximately 5-fold increased over those reported for the 0.1-ml input volume, and those reported for the 1.0-ml input volume were 10-fold increased over those reported for the 0.1-ml input volume. For the specimen input volumes investigated, a common linear range of 264 to 5,400,000 HIV-1 RNA copies was observed. The use of increased specimen input volumes did not result in a loss of assay specificity, as the results reported for specimens from 50 seronegative blood donors were negative at all three specimen input volumes. In conclusion, an increase in the input volume of specimens analyzed by nucleic acid amplification technology can be useful for the enhanced detection of HIV-1 RNA.

MeSH Terms
CD4 Lymphocyte Count HIV Infections/blood Humans Nucleic Acid Amplification Techniques RNA, Viral/blood Sensitivity and Specificity Specimen Handling Viral Load
Chemicals
RNA, Viral
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Witt D J
Organon Teknika Corporation, Durham, North Carolina, USA. dwitt@orgtek.com
Kemper M
Stead A
Ginocchio C C
Caliendo A M
References (9)
9 references, click to expand
  1. Rapid and simple method for purification of nucleic acids.
    J Clin Microbiol. 1990 Mar;28(3):495-503 PMID: 1691208
  2. Biological variation and quality control of plasma human immunodeficiency virus type 1 RNA quantitation by reverse transcriptase polymerase chain reaction.
    J Clin Microbiol. 1993 Nov;31(11):2960-6 PMID: 7903317
  3. A one-tube quantitative HIV-1 RNA NASBA nucleic acid amplification assay using electrochemiluminescent (ECL) labelled probes.
    J Virol Methods. 1994 Sep;49(2):157-67 PMID: 7822457
  4. Evaluation of a quality assurance program for quantitation of human immunodeficiency virus type 1 RNA in plasma by the AIDS Clinical Trials Group virology laboratories.
    J Clin Microbiol. 1996 Nov;34(11):2695-701 PMID: 8897167
  5. Comparison of levels of human immunodeficiency virus type 1 RNA in plasma as measured by the NucliSens nucleic acid sequence-based amplification and Quantiplex branched-DNA assays.
    J Clin Microbiol. 1999 Apr;37(4):1210-2 PMID: 10074556
  6. Effects of specimen collection, processing, and storage conditions on stability of human immunodeficiency virus type 1 RNA levels in plasma.
    J Clin Microbiol. 1997 Nov;35(11):2886-93 PMID: 9350753
  7. Evaluation of the ultrasensitive Roche Amplicor HIV-1 monitor assay for quantitation of human immunodeficiency virus type 1 RNA.
    J Clin Microbiol. 1999 Mar;37(3):792-5 PMID: 9986856
  8. HIV-1 replication in patients with undetectable plasma virus receiving HAART. Highly active antiretroviral therapy.
    Lancet. 1999 Jan 9;353(9147):119-20 PMID: 10023903
  9. A rapid and simple method for extracting human immunodeficiency virus type 1 RNA from plasma: enhanced sensitivity.
    J Clin Microbiol. 1997 May;35(5):1278-80 PMID: 9114426
Article Info
Journal
Journal of clinical microbiology
Abbr.
J Clin Microbiol
ISSN
0095-1137
Published
2000-01-00
Pages
85-9
Language
English
Region
United States
NLM ID
7505564
PMCID
PMC86025
Subset
IM
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