Home LiteratureArticle Details
PMID: 10606637 Published · ppublish English Journal Article

Members of the SRY family regulate the human LINE retrotransposons.

Nucleic acids research ·Vol. 28 ·No. 2 ·2000-01-15 ·Pages 411-5

Tchénio T, Casella JF, Heidmann T

Abstract

LINEs are endogenous mobile genetic elements which have dispersed and accumulated in the genomes of most higher eukaryotes via germline transposition, with up to 100 000 copies for the human LINE-1 (L1H) sequences. Although severely repressed in most normal tissues, L1H is still functional, with evidence for both germline and somatic-essentially in tumors-transpositions. Yet, no transcription factor that could regulate their transcription and be responsible for their transposition has hitherto been described. Here we show that factors belonging to the family of the testis-determining factor gene SRY (the SOX family) can modulate L1H promoter activity over a 10-fold range in a transient transfection assay using a luciferase reporter gene. These effects depend on two functional SRY binding sites which can be identified within the L1H promoter via mobility shift assays. Induction of endogenous L1Hs upon ectopic expression of the SOX11 transcription factor is further demonstrated, thus strengthening the physiological relevance of these new-and highly dispersed-target sites for the otherwise unclassical transcription factors of the SRY family.

MeSH Terms
Base Sequence Blotting, Northern Cell Line DNA DNA-Binding Proteins/physiology Electrophoresis, Polyacrylamide Gel Gene Expression Regulation/physiology Genes, Reporter Humans Long Interspersed Nucleotide Elements Luciferases/genetics Nuclear Proteins Promoter Regions, Genetic Sex-Determining Region Y Protein Transcription Factors
Chemicals
DNA-Binding Proteins Nuclear Proteins SRY protein, human Sex-Determining Region Y Protein Transcription Factors DNA Luciferases
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Tchénio T
Unité des Rétrovirus Endogènes et Eléments Rétroï des des Eucaryotes Supérieurs, UMR1573 CNRS, Institut Gustave Roussy, 39 rue Camille Desmoulins, 94805 Villejuif Cedex, France.
Casella J F
Heidmann T
References (31)
31 references, click to expand
  1. Expression of a cytoplasmic LINE-1 transcript is regulated in a human teratocarcinoma cell line.
    Proc Natl Acad Sci U S A. 1985 Sep;82(18):6050-4 PMID: 2412228
  2. Diversification pattern of the HMG and SOX family members during evolution.
    J Mol Evol. 1999 May;48(5):517-27 PMID: 10198118
  3. A gene from the human sex-determining region encodes a protein with homology to a conserved DNA-binding motif.
    Nature. 1990 Jul 19;346(6281):240-4 PMID: 1695712
  4. A gene mapping to the sex-determining region of the mouse Y chromosome is a member of a novel family of embryonically expressed genes.
    Nature. 1990 Jul 19;346(6281):245-50 PMID: 2374589
  5. Identification, characterization, and cell specificity of a human LINE-1 promoter.
    Mol Cell Biol. 1990 Dec;10(12):6718-29 PMID: 1701022
  6. Revised genomic consensus for the hypermethylated CpG island region of the human L1 transposon and integration sites of full length L1 elements from recombinant clones made using methylation-tolerant host strains.
    Nucleic Acids Res. 1991 May 11;19(9):2395-401 PMID: 1710354
  7. Isolation of an active human transposable element.
    Science. 1991 Dec 20;254(5039):1805-8 PMID: 1662412
  8. Active LINE-1 retrotransposons in human testicular cancer.
    Oncogene. 1992 Mar;7(3):507-10 PMID: 1312702
  9. Identification of an internal cis-element essential for the human L1 transcription and a nuclear factor(s) binding to the element.
    Nucleic Acids Res. 1992 Jun 25;20(12):3139-45 PMID: 1320255
  10. SRY, like HMG1, recognizes sharp angles in DNA.
    EMBO J. 1992 Dec;11(12):4497-506 PMID: 1425584
  11. LINE-1 retrotransposon expression in pediatric germ cell tumors.
    Cancer. 1993 Apr 1;71(7):2383-6 PMID: 8384068
  12. Undermethylation of specific LINE-1 sequences in human cells producing a LINE-1-encoded protein.
    Gene. 1993 Nov 15;133(2):273-7 PMID: 7693554
  13. Binding of the ubiquitous nuclear transcription factor YY1 to a cis regulatory sequence in the human LINE-1 transposable element.
    Hum Mol Genet. 1993 Oct;2(10):1697-702 PMID: 8268924
  14. LINE-1: a human transposable element.
    Gene. 1993 Dec 15;135(1-2):183-8 PMID: 8276257
  15. SOX3 is an X-linked gene related to SRY.
    Hum Mol Genet. 1993 Dec;2(12):2013-8 PMID: 8111369
  16. Sex-reversing mutations affect the architecture of SRY-DNA complexes.
    EMBO J. 1994 Dec 15;13(24):6115-24 PMID: 7813448
  17. RNA polymerase III dependence of the human L1 promoter and possible participation of the RNA polymerase II factor YY1 in the RNA polymerase III transcription system.
    Nucleic Acids Res. 1995 Sep 25;23(18):3704-9 PMID: 7479000
  18. The nuclear matrix protein NMP-1 is the transcription factor YY1.
    Proc Natl Acad Sci U S A. 1995 Nov 7;92(23):10526-30 PMID: 7479833
  19. The human SOX11 gene: cloning, chromosomal assignment and tissue expression.
    Genomics. 1995 Sep 20;29(2):541-5 PMID: 8666406
  20. A comparison of the properties of Sox-3 with Sry and two related genes, Sox-1 and Sox-2.
    Development. 1996 Feb;122(2):509-20 PMID: 8625802
  21. The HMG box of SRY is a calmodulin binding domain.
    FEBS Lett. 1996 Aug 5;391(1-2):24-8 PMID: 8706923
  22. Architectural transcription factors: proteins that remodel DNA.
    Cell. 1997 Mar 21;88(6):733-6 PMID: 9118214
  23. Identification of critical CpG sites for repression of L1 transcription by DNA methylation.
    Gene. 1997 Apr 21;189(2):227-34 PMID: 9168132
  24. Human testis-determining factor SRY binds to the major DNA adduct of cisplatin and a putative target sequence with comparable affinities.
    Biochemistry. 1998 Jan 6;37(1):352-62 PMID: 9425057
  25. Phosphorylation of an N-terminal motif enhances DNA-binding activity of the human SRY protein.
    J Biol Chem. 1998 Apr 3;273(14):7988-95 PMID: 9525897
  26. The impact of L1 retrotransposons on the human genome.
    Nat Genet. 1998 May;19(1):19-24 PMID: 9590283
  27. Cooperative function of POU proteins and SOX proteins in glial cells.
    J Biol Chem. 1998 Jun 26;273(26):16050-7 PMID: 9632656
  28. The DNA-binding specificity of SOX9 and other SOX proteins.
    Nucleic Acids Res. 1999 Mar 1;27(5):1359-64 PMID: 9973626
  29. From head to toes: the multiple facets of Sox proteins.
    Nucleic Acids Res. 1999 Mar 15;27(6):1409-20 PMID: 10037800
  30. Exon shuffling by L1 retrotransposition.
    Science. 1999 Mar 5;283(5407):1530-4 PMID: 10066175
  31. Nucleolar transcription factor hUBF contains a DNA-binding motif with homology to HMG proteins.
    Nature. 1990 Apr 26;344(6269):830-6 PMID: 2330041
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
1362-4962
Published
2000-01-15
Pages
411-5
Language
English
Region
England
NLM ID
0411011
PMCID
PMC102531
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com