Abstract
Analysis of 12 Helicobacter pylori promoters indicates the existence of a consensus -10 hexamer (TAtaaT) but little conservation of -35 sequences. In this study, mutations in either the H. pylori vacA -10 region or the -35 region resulted in decreased vacA transcription and suggested that an extended -10 motif is utilized. Thus, despite the lack of a -35 consensus sequence for H. pylori promoters, the -35 region plays a functional role in vacA transcription.
MeSH Terms
Amino Acid Sequence
Bacterial Proteins/genetics
Bacterial Toxins/genetics
Base Sequence
Consensus Sequence
DNA, Bacterial
DNA-Directed RNA Polymerases/genetics
Gene Expression Regulation, Bacterial
Genes, Bacterial
Helicobacter pylori/genetics
Molecular Sequence Data
Mutagenesis
Promoter Regions, Genetic
Sigma Factor/genetics
Transcription, Genetic
Chemicals
Bacterial Proteins
Bacterial Toxins
DNA, Bacterial
Sigma Factor
VacA protein, Helicobacter pylori
RNA polymerase sigma 70
DNA-Directed RNA Polymerases
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Forsyth M H
Departments of Medicine and Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, Tennessee 37232-2605, USA.
Cover T L
References (27)
27 references, click to expand
-
Structure and function of bacterial sigma factors.
Annu Rev Biochem. 1988;57:839-72
PMID: 3052291
-
Analysis of E. coli promoter sequences.
Nucleic Acids Res. 1987 Mar 11;15(5):2343-61
PMID: 3550697
-
The sigma 70 family: sequence conservation and evolutionary relationships.
J Bacteriol. 1992 Jun;174(12):3843-9
PMID: 1597408
-
The minus 35-recognition region of Escherichia coli sigma 70 is inessential for initiation of transcription at an "extended minus 10" promoter.
J Mol Biol. 1993 Jul 20;232(2):406-18
PMID: 8345519
-
Divergence of genetic sequences for the vacuolating cytotoxin among Helicobacter pylori strains.
J Biol Chem. 1994 Apr 8;269(14):10566-73
PMID: 8144644
-
Genetic organization and enzymatic activity of a superoxide dismutase from the microaerophilic human pathogen, Helicobacter pylori.
Gene. 1994 May 27;143(1):111-6
PMID: 7515365
-
Genetic analysis of the Helicobacter pylori vacuolating cytotoxin: structural similarities with the IgA protease type of exported protein.
Mol Microbiol. 1994 Apr;12(2):307-19
PMID: 8057855
-
Helicobacter pylori hspA-hspB heat-shock gene cluster: nucleotide sequence, expression, putative function and immunogenicity.
Mol Microbiol. 1994 Dec;14(5):959-74
PMID: 7715457
-
Genetic organization of a small cryptic plasmid of Helicobacter pylori.
Gene. 1995 Nov 7;165(1):17-24
PMID: 7489910
-
The vacuolating cytotoxin of Helicobacter pylori.
Mol Microbiol. 1996 Apr;20(2):241-6
PMID: 8733223
-
The sigma subunit of Escherichia coli RNA polymerase senses promoter spacing.
Proc Natl Acad Sci U S A. 1996 Aug 20;93(17):8858-62
PMID: 8799117
-
Cloning and genetic characterization of Helicobacter pylori catalase and construction of a catalase-deficient mutant strain.
J Bacteriol. 1996 Dec;178(23):6960-7
PMID: 8955320
-
Helicobacter pylori genes hpcopA and hpcopP constitute a cop operon involved in copper export.
FEMS Microbiol Lett. 1996 Dec 1;145(2):181-8
PMID: 8961555
-
Region 2.5 of the Escherichia coli RNA polymerase sigma70 subunit is responsible for the recognition of the 'extended-10' motif at promoters.
EMBO J. 1997 Jul 1;16(13):4034-40
PMID: 9233812
-
Identification and characterization of an operon of Helicobacter pylori that is involved in motility and stress adaptation.
J Bacteriol. 1997 Aug;179(15):4676-83
PMID: 9244252
-
The complete genome sequence of the gastric pathogen Helicobacter pylori.
Nature. 1997 Aug 7;388(6642):539-47
PMID: 9252185
-
A flagellar sheath protein of Helicobacter pylori is identical to HpaA, a putative N-acetylneuraminyllactose-binding hemagglutinin, but is not an adhesin for AGS cells.
J Bacteriol. 1997 Sep;179(17):5643-7
PMID: 9287032
-
The major sigma factor (RpoD) from Helicobacter pylori and other gram-negative bacteria shows an enhanced rate of divergence.
J Bacteriol. 1997 Oct;179(19):6196-200
PMID: 9324272
-
Helicobacter pylori.
Clin Microbiol Rev. 1997 Oct;10(4):720-41
PMID: 9336670
-
Transcriptional analysis of the divergent cagAB genes encoded by the pathogenicity island of Helicobacter pylori.
Mol Microbiol. 1997 Oct;26(2):361-72
PMID: 9383160
-
Identification of Campylobacter jejuni promoter sequences.
J Bacteriol. 1998 Feb;180(3):594-9
PMID: 9457862
-
RNA polymerase-promoter interactions: the comings and goings of RNA polymerase.
J Bacteriol. 1998 Jun;180(12):3019-25
PMID: 9620948
-
Heterogeneity in levels of vacuolating cytotoxin gene (vacA) transcription among Helicobacter pylori strains.
Infect Immun. 1998 Jul;66(7):3088-94
PMID: 9632570
-
Motility of Helicobacter pylori is coordinately regulated by the transcriptional activator FlgR, an NtrC homolog.
J Bacteriol. 1999 Jan;181(2):593-9
PMID: 9882675
-
Subunit of assembly of Escherichia coli RNA polymerase.
Adv Biophys. 1981;14:1-35
PMID: 7015808
-
Compilation and analysis of Escherichia coli promoter DNA sequences.
Nucleic Acids Res. 1983 Apr 25;11(8):2237-55
PMID: 6344016
-
Molecular assembly and functional modulation of Escherichia coli RNA polymerase.
Adv Biophys. 1990;26:19-31
PMID: 2082727