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TCGA 数据库

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云馆首页 资源列表 TCGA 数据库 ACC
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本资源为 TCGA 泛癌种原始数据集合,按癌种缩写(ACC、BLCA、BRCA、COAD、GBM、LUAD、LUSC 等三十余种)分目录组织,收录 GDAC Broad Institute 于 2016 年 1 月发布的 Level 3 数据,涵盖 RNA-seq(基因/异构体/外显子/剪接接合定量)、miRNA-seq、DNA 甲基化、拷贝数变异与 SNP 芯片分段、体细胞突变 calls、RPPA 蛋白表达及临床信息等多种数据类型,同时附有各癌种汇总 CSV 文件、下载脚本及一份基于 enMCB 方法的分析工程(含差异表达、甲基化模块与生存预测流程)。适用于肿瘤多组学整合分析、分子分型、生物标志物筛选与生存建模等研究场景,可供生信分析人员在本地复现 TCGA 相关流程或开展泛癌比较研究。
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名称 大小 修改时间 操作
gdac.broadinstitute.org_ACC.Clinical_Pick_Tier1.aux.2016012800.0.0 - 2017-11-18 07:16 进入
gdac.broadinstitute.org_ACC.Clinical_Pick_Tier1.Level_4.2016012800.0.0 - 2017-11-18 11:35 进入
gdac.broadinstitute.org_ACC.Clinical_Pick_Tier1.mage-tab.2016012800.0.0 - 2017-11-18 11:42 进入
gdac.broadinstitute.org_ACC.Merge_Clinical.aux.2016012800.0.0 - 2017-11-18 11:33 进入
gdac.broadinstitute.org_ACC.Merge_Clinical.Level_1.2016012800.0.0 - 2017-11-18 07:16 进入
gdac.broadinstitute.org_ACC.Merge_Clinical.mage-tab.2016012800.0.0 - 2017-11-18 07:17 进入
gdac.broadinstitute.org_ACC.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.aux.2016012800.0.0 - 2017-11-18 07:17 进入
gdac.broadinstitute.org_ACC.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2016012800.0.0 - 2017-11-18 12:08 进入
gdac.broadinstitute.org_ACC.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.mage-tab.2016012800.0.0 - 2017-11-18 07:16 进入
gdac.broadinstitute.org_ACC.Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data.aux.2016012800.0.0 - 2017-11-18 11:42 进入
gdac.broadinstitute.org_ACC.Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data.Level_3.2016012800.0.0 - 2017-11-18 07:21 进入
gdac.broadinstitute.org_ACC.Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data.mage-tab.2016012800.0.0 - 2017-11-18 07:21 进入
gdac.broadinstitute.org_ACC.Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data.aux.2016012800.0.0 - 2017-11-18 11:37 进入
gdac.broadinstitute.org_ACC.Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data.Level_3.2016012800.0.0 - 2017-11-18 07:20 进入
gdac.broadinstitute.org_ACC.Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data.mage-tab.2016012800.0.0 - 2017-11-18 12:08 进入
gdac.broadinstitute.org_ACC.Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data.aux.2016012800.0.0 - 2017-11-18 11:33 进入
gdac.broadinstitute.org_ACC.Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data.Level_3.2016012800.0.0 - 2017-11-18 11:42 进入
gdac.broadinstitute.org_ACC.Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data.mage-tab.2016012800.0.0 - 2017-11-18 07:21 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data.aux.2016012800.0.0 - 2017-11-18 07:16 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data.Level_3.2016012800.0.0 - 2017-11-18 12:08 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data.mage-tab.2016012800.0.0 - 2017-11-18 11:42 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data.aux.2016012800.0.0 - 2017-11-18 07:21 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data.Level_3.2016012800.0.0 - 2017-11-18 11:41 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data.mage-tab.2016012800.0.0 - 2017-11-18 11:42 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data.aux.2016012800.0.0 - 2017-11-18 11:35 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data.Level_3.2016012800.0.0 - 2017-11-18 11:35 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data.mage-tab.2016012800.0.0 - 2017-11-18 11:33 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data.aux.2016012800.0.0 - 2017-11-18 11:33 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data.Level_3.2016012800.0.0 - 2017-11-18 12:19 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data.mage-tab.2016012800.0.0 - 2017-11-18 07:17 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms__data.aux.2016012800.0.0 - 2017-11-18 07:16 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms__data.Level_3.2016012800.0.0 - 2017-11-18 11:37 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms__data.mage-tab.2016012800.0.0 - 2017-11-18 11:38 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data.aux.2016012800.0.0 - 2017-11-18 11:33 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data.Level_3.2016012800.0.0 - 2017-11-18 07:22 进入
gdac.broadinstitute.org_ACC.Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data.mage-tab.2016012800.0.0 - 2017-11-18 07:16 进入
gdac.broadinstitute.org_ACC.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg.aux.2016012800.0.0 - 2017-11-18 07:17 进入
gdac.broadinstitute.org_ACC.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg.Level_3.2016012800.0.0 - 2017-11-18 12:19 进入
gdac.broadinstitute.org_ACC.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg.mage-tab.2016012800.0.0 - 2017-11-18 07:21 进入
gdac.broadinstitute.org_ACC.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.aux.2016012800.0.0 - 2017-11-18 12:08 进入
gdac.broadinstitute.org_ACC.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.Level_3.2016012800.0.0 - 2017-11-18 11:38 进入
gdac.broadinstitute.org_ACC.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.mage-tab.2016012800.0.0 - 2017-11-18 12:19 进入
gdac.broadinstitute.org_ACC.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg.aux.2016012800.0.0 - 2017-11-18 11:35 进入
gdac.broadinstitute.org_ACC.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg.Level_3.2016012800.0.0 - 2017-11-18 11:38 进入
gdac.broadinstitute.org_ACC.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg.mage-tab.2016012800.0.0 - 2017-11-18 07:17 进入
gdac.broadinstitute.org_ACC.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.aux.2016012800.0.0 - 2017-11-18 07:17 进入
gdac.broadinstitute.org_ACC.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.Level_3.2016012800.0.0 - 2017-11-18 12:08 进入
gdac.broadinstitute.org_ACC.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.mage-tab.2016012800.0.0 - 2017-11-18 11:42 进入
gdac.broadinstitute.org_ACC.Methylation_Preprocess.aux.2016012800.0.0 - 2017-11-18 11:38 进入
gdac.broadinstitute.org_ACC.Methylation_Preprocess.Level_3.2016012800.0.0 - 2017-11-18 11:39 进入
gdac.broadinstitute.org_ACC.Methylation_Preprocess.mage-tab.2016012800.0.0 - 2017-11-18 11:41 进入
gdac.broadinstitute.org_ACC.miRseq_Mature_Preprocess.Level_3.2016012800.0.0 - 2017-11-18 12:08 进入
gdac.broadinstitute.org_ACC.miRseq_Mature_Preprocess.mage-tab.2016012800.0.0 - 2017-11-18 11:38 进入
gdac.broadinstitute.org_ACC.miRseq_Preprocess.Level_3.2016012800.0.0 - 2017-11-18 07:16 进入
gdac.broadinstitute.org_ACC.miRseq_Preprocess.mage-tab.2016012800.0.0 - 2017-11-18 11:38 进入
gdac.broadinstitute.org_ACC.mRNAseq_Preprocess.aux.2016012800.0.0 - 2017-11-18 11:42 进入
gdac.broadinstitute.org_ACC.mRNAseq_Preprocess.Level_3.2016012800.0.0 - 2017-11-18 07:20 进入
gdac.broadinstitute.org_ACC.mRNAseq_Preprocess.mage-tab.2016012800.0.0 - 2017-11-18 07:21 进入
gdac.broadinstitute.org_ACC.Mutation_Packager_Calls.aux.2016012800.0.0 - 2017-11-18 11:42 进入
gdac.broadinstitute.org_ACC.Mutation_Packager_Calls.Level_3.2016012800.0.0 - 2017-11-18 11:33 进入
gdac.broadinstitute.org_ACC.Mutation_Packager_Calls.mage-tab.2016012800.0.0 - 2017-11-18 11:33 进入
gdac.broadinstitute.org_ACC.Mutation_Packager_Coverage.aux.2016012800.0.0 - 2017-11-18 11:35 进入
gdac.broadinstitute.org_ACC.Mutation_Packager_Coverage.Level_3.2016012800.0.0 - 2017-11-18 11:30 进入
gdac.broadinstitute.org_ACC.Mutation_Packager_Coverage.mage-tab.2016012800.0.0 - 2017-11-18 07:20 进入
gdac.broadinstitute.org_ACC.Mutation_Packager_Oncotated_Calls.aux.2016012800.0.0 - 2017-11-18 07:20 进入
gdac.broadinstitute.org_ACC.Mutation_Packager_Oncotated_Calls.Level_3.2016012800.0.0 - 2017-11-18 07:17 进入
gdac.broadinstitute.org_ACC.Mutation_Packager_Oncotated_Calls.mage-tab.2016012800.0.0 - 2017-11-18 11:42 进入
gdac.broadinstitute.org_ACC.RPPA_AnnotateWithGene.aux.2016012800.0.0 - 2017-11-18 07:16 进入
gdac.broadinstitute.org_ACC.RPPA_AnnotateWithGene.Level_3.2016012800.0.0 - 2017-11-18 11:41 进入
gdac.broadinstitute.org_ACC.RPPA_AnnotateWithGene.mage-tab.2016012800.0.0 - 2017-11-18 12:08 进入
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