TRIM6(tripartite motif containing 6) 转至新版数据库

基因简称(symbol)
    [HGNC]     [GeneCards]     [NCBI]
基因种类(locus group)
同源简称(alias symbol)
基因家族代码(gene_family_id)
    [HGNC]     [GenScript]
omim代码
entrez码
    [Vega]
vega基因码
ensembl基因码
    [Ensembl]
基因家族(gene family)
refseq数据库代号

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基因种类(locus_type)
基因名称状态(status)
location_sortable
同源基因名称(alias name)
基因名称批准使用时间(date_approved_reserved)
基因简称更名时间(date_symbol_changed)
基因名称更名时间(date_name_changed)
更新时间(date_modified)
ucsc码
ena
ccds数据码
uniprot数据码
pubmed代码
mgd码
rgd码
生命科学数据库(lsdb)
更新时间(date modified)
cosmic
mirbase
基因曾用简称(prev symbol)
基因曾用名称(prev name)
homeodb
cosmic
snornabase
bioparadigms slc
orphanet
假基因信息(pseudogeneorg)
horde id
merops
imgt
iuphar
kznf基因类别
mamit-trnadb
cd
LncRNA数据库
酶代码
中间纤维数据库

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11p15
基因染色体位置图

The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, B-box type 1 and B-box type 2 domain, and a coiled-coil region. The protein localizes to the nucleus, but its specific function has not been identified. This gene is mapped to chromosome 11p15, where it resides within a TRIM gene cluster. Alternative splicing results in multiple transcript variants. A read-through transcript from this gene into the downstream TRIM34 gene has also been observed, which results in a fusion product from these neighboring family members. [provided by RefSeq, Oct 2010]

[中文简述(自动翻译):]  该基??因编码的蛋白是三方母题(TRIM)家族中的一员。 TRIM的基序包括三个锌结合结构域,一个环,B框1型和2 B框型结构域,以及一个卷曲螺旋区域。该蛋白定位于细胞核,但其特定的功能还没有被确定。该基因被映射到11p15染色体,它驻留在TRIM基因簇内。选择性剪接结果在多个抄本变形。从该基因的通读转录进入下游TRIM34基因也已经观察到,其导致从这些相邻家庭成员的融合产物。 [由RefSeq的,2010年10月提供]

TRIM6基因的碱基序列:[NCBI]
TRIM6基因的碱基突变:           显示全部snp
rs720677       rs756035       rs870727       rs1074353       rs1074354       rs1368693       rs1813324       rs1989427       rs2001778       rs2011014       rs3082333       rs3740999       rs3751005       rs3751006       rs3763881       rs3824950       rs4255566       rs4430546       rs4910823       rs4910824       rs4910825       rs4910826       rs4910827       rs4910828       rs5789414       rs5789415       rs5789416       rs6578665       rs6578666       rs7103076       rs7104061       rs7104648       rs7105329       rs7105335       rs7106584       rs7106976       rs7108470      
rs7120093       rs7120209       rs7121553       rs7121942       rs7122121       rs7124293       rs7125403       rs7125514       rs7126242       rs7482225       rs7927012       rs7936854       rs7945868       rs7952456       rs10500653       rs10734530       rs10734531       rs10742736       rs10742742       rs10769112       rs10769113       rs10769114       rs10769115       rs10769118       rs10769121       rs10769124       rs10838406       rs10838409       rs10838410       rs10838411       rs10838412       rs10838424       rs10838432       rs11038270       rs11038272       rs11038273       rs11038294       rs11038295       rs11038307       rs11038323       rs11038328       rs11038330       rs11038336       rs11038338       rs11038346       rs11602842       rs11822879       rs11824446       rs12271988       rs12272467       rs12278274       rs12288184       rs12800884       rs17304278       rs33930296       rs34210833       rs35434000       rs35793386       rs55994352       rs56041517       rs56108003       rs56253733       rs57856328       rs58023584       rs58293404       rs58676908       rs59525949       rs59650010       rs60859015       rs61065873       rs61756355       rs61758093       rs61758094       rs61758095       rs61758096       rs61875718       rs61890858       rs61892491       rs71053281       rs71053282       rs71053283       rs71468041       rs72880076       rs72880092       rs72882004       rs73400343       rs73400351       rs74050994       rs74050998       rs74050999       rs74051012       rs74555314       rs74711448       rs74854361       rs74862688       rs74908789       rs74926539       rs74937280       rs75177855       rs75610433       rs75669793       rs75670668       rs75742187       rs76380151       rs76467179       rs76627731       rs76635660       rs76647331       rs77528720       rs78001465       rs78909497       rs79096956       rs79773207       rs79852700       rs79965857       rs80031403       rs80074547       rs80142195       rs80152965       rs111252624       rs111575779       rs111778690       rs111846917       rs112003465       rs112049775       rs112106923       rs112252011       rs112297161       rs112541160       rs112667416       rs112822421       rs112828220       rs113091104       rs113093024       rs113450512       rs113541715       rs113634625       rs113911315       rs114613632       rs114716751       rs115128341       rs115525594       rs116176358       rs116926583       rs117085933       rs117555628       rs118048957       rs137855332       rs138010360       rs138262721       rs138264218       rs138326339       rs138509220       rs138639103       rs138709290       rs138798578       rs139191411       rs139569291       rs139576428       rs139606995       rs139624469       rs139792771       rs139865488       rs139966164       rs140100210       rs140115158       rs140306650       rs140488832       rs140521073       rs140708622       rs140716776       rs140746453       rs141046578       rs141052639       rs141311206       rs141427523       rs141597570       rs141772553       rs142243294       rs142302167       rs142429455       rs142441428       rs142574071       rs143156833       rs143334533       rs143341598       rs143777426       rs143836356       rs144062462       rs144271504       rs144298711       rs144341178       rs144396720       rs144539788       rs144757293       rs145003281       rs145228807       rs145311033       rs145524814       rs145542753       rs145630286       rs145691792       rs145793757       rs145873528       rs145896551       rs145904748       rs145970856       rs145998177       rs146012348       rs146070868       rs146093933       rs146299868       rs146355372       rs146413218       rs146431539       rs146497638       rs146556805       rs146638889       rs147049548       rs147065933       rs147084130       rs147187884       rs147290052       rs147450872       rs147468438       rs147550132       rs147571399       rs147626863       rs147695773       rs147731518       rs148058504       rs148287583       rs148308076       rs148406164       rs148459569       rs148858378       rs149108737       rs149230132       rs149336262       rs149390270       rs149440875       rs149459566       rs149579702       rs149628379       rs149734213       rs149738732       rs149860271       rs149983038       rs150258534       rs150264295       rs150314237       rs150382496       rs150611053       rs150750288       rs150778640       rs151130254       rs151133381       rs151156245       rs151276970       rs151311625       rs180806232       rs180826129       rs180828389       rs180941748       rs181026694       rs181598820       rs181686573       rs181713803       rs181790286       rs181983076       rs182199116       rs182492028       rs182566271       rs182703605       rs182720892       rs182825324       rs182861938       rs183048538       rs183126218       rs183150284       rs183278924       rs183559839       rs183713601       rs183779231       rs183917717       rs183926125       rs183956153       rs183998619       rs184065983       rs184633811       rs184696635       rs184802116       rs184862039       rs184918430       rs185321724       rs185473959       rs185570122       rs185629881       rs185679159       rs185691831       rs185768203       rs185923814       rs185926310       rs186240941       rs186540725       rs186603849       rs186624082       rs186769331       rs187106757       rs187237273       rs187462370       rs187751813       rs187846440       rs187868924       rs187886331       rs188009228       rs188011338       rs188122840       rs188155997       rs188198831       rs188216900       rs188400721       rs188656901       rs188762587       rs188881551       rs188964269       rs189199615       rs189203170       rs189888019       rs190134280       rs190396831       rs190408130       rs190408356       rs190640112       rs190731210       rs190821922       rs190964443       rs191047999       rs191075591       rs191339300       rs191347912       rs191490750       rs191514407       rs191519448       rs191520056       rs191522095       rs191627083       rs191666821       rs191768853       rs191962966       rs192153421       rs192376534       rs192376845       rs192471501       rs192827622       rs192865587       rs192937012       rs193128575       rs193172941       rs199560022       rs199694284       rs199778659       rs199973005       rs200045671       rs200396157       rs200510947       rs200603533       rs200818216       rs200954808       rs201013112       rs201166596       rs201254905       rs201371091       rs201389428       rs201507741       rs201941845       rs201964314       rs201989495       rs202161716       rs367682498       rs367883481       rs368083858       rs368085135       rs368132612       rs368422880       rs368555091       rs368564773       rs369890367       rs369972401       rs369978095       rs370175547       rs370360427       rs370433618       rs370613548       rs370756306       rs370837196       rs370895257       rs371217479       rs371241275       rs371490496       rs371737190       rs372006082       rs372036526       rs372376116       rs372491402       rs372755176       rs373057207       rs373892712       rs374184703       rs374195536       rs374309310       rs374319206       rs375075797       rs375131175       rs375436992       rs375490441       rs375513954       rs375554604       rs375651329       rs375779984       rs375793836       rs375969165       rs376005292       rs376362041       rs376632691       rs376704480       rs376844947       rs376937201       rs377683783       rs377692198       rs398044975       rs527267654       rs527361959       rs527397692       rs527518342       rs527735718       rs527838177       rs527951900       rs528144076       rs528234995       rs528376989       rs528636810       rs528711020       rs528797205       rs528883238       rs529045647       rs529176394       rs529429284       rs529429398       rs529520293       rs529523849       rs529560523       rs529587545       rs529779192       rs529810089       rs530801507       rs530921072       rs531275781       rs531316467       rs531420510       rs531445231       rs531591812       rs531796890       rs531885956       rs532184721       rs532394542       rs532602580       rs532890041       rs532949862       rs533152999       rs533426403       rs533451075       rs533680874       rs533845300       rs534082298       rs534183980       rs534249212       rs534721531       rs534754026       rs534826982       rs534890829       rs534947542       rs534969369       rs535285072       rs535589858       rs535645413       rs535710442       rs535862444       rs535867640       rs536103567       rs536118694       rs536576589       rs536622605       rs536788209       rs536838976       rs537193285       rs537300261       rs537359676       rs537421272       rs537461225       rs537783151       rs538072742       rs538099921       rs538172051       rs538261205       rs538387515       rs538509765       rs538571572       rs538802425       rs538964767       rs539486118       rs539542591       rs539665701       rs539704901       rs539712269       rs540079290       rs540194369       rs540243747       rs540729509       rs540792202       rs540838151       rs541089157       rs541124540       rs541124640       rs541328534       rs541551658       rs541639566       rs541789376       rs541827516       rs541875505       rs542308130       rs542311860       rs542390599       rs542663171       rs542977244       rs543022301       rs543089512       rs543104458       rs543156206       rs543187213       rs543263367       rs543337212       rs543889197       rs544213898       rs544244167       rs544283388       rs544398476       rs544559036       rs544649148       rs544803374       rs545015474       rs545115255       rs545430803       rs545606094       rs545694453       rs545815994       rs545844450       rs545994000       rs546067208       rs546071361       rs546699580       rs546761727       rs546868957       rs546872163       rs546886123       rs546905755       rs547161595       rs547539966       rs547572992       rs547576360       rs548054747       rs548107717       rs548767152       rs548975518       rs549203521       rs549406924       rs549490468       rs549492406       rs549651089       rs549862285       rs549912092       rs549997483       rs550219530       rs550323866       rs550641989       rs550665848       rs550774934       rs550888039       rs550892169       rs550954490       rs551033017       rs551460131       rs551639395       rs551822233       rs551887085       rs551890686       rs551890732       rs552050907       rs552164820       rs552202185       rs552237551       rs552263532       rs552473101       rs552776477       rs552791633       rs553097029       rs553311132       rs553381663       rs553397112       rs553470449       rs553502954       rs553656574       rs553766906       rs553774217       rs554092629       rs554147273       rs554149179       rs554437365       rs554524414       rs555165354       rs555202047       rs555279540       rs555569352       rs555679565       rs555888816       rs555934533       rs555966626       rs556395810       rs556678644       rs556744032       rs556746495       rs556902958       rs557221726       rs557403254       rs557625382       rs557712897       rs557879242       rs557944779       rs558101585       rs558105129       rs558140180       rs558144335       rs558609159       rs558729537       rs559076210       rs559162909       rs559188745       rs559573653       rs559665488       rs559852801       rs560414378       rs560448178       rs560479213       rs560684997       rs560783749       rs560816571       rs561012800       rs561135947       rs561423125       rs561540101       rs561620100       rs561708936       rs561836797       rs561899630       rs561983742       rs562012750       rs562059497       rs562306370       rs562355908       rs562517249       rs562756457       rs562867926       rs563182760       rs563220581       rs563418012       rs563449373       rs563943170       rs563956654       rs564221753       rs564227017       rs564245003       rs564263054       rs564295328       rs564458326       rs565666824       rs565692402       rs565910031       rs566266677       rs566305358       rs566377089       rs566662737       rs566701455       rs566794457       rs566812594       rs566987232       rs568035381       rs568140632       rs568244897       rs568264360       rs568430050       rs568541494       rs568622695       rs568997931       rs568998031       rs569071522       rs569153011       rs569229405       rs569307458       rs569349264       rs569473133       rs569632965       rs569899685       rs570112678       rs570224497       rs570422174       rs570504954       rs570827732       rs570890410       rs570979047       rs571175867       rs571348399       rs571499574       rs571788045       rs571810784       rs572081122       rs572109554       rs572318477       rs572447569       rs572485009       rs572628885       rs572665146       rs572852667       rs572871395       rs572982690       rs573066140       rs573078587       rs573778141       rs573878037       rs573891389       rs573917319       rs573956007       rs574233282       rs574293699       rs574326108       rs574490670       rs574566785       rs574804446       rs574813106       rs575267244       rs575631945       rs575719813       rs575743011       rs576059940       rs576369577       rs576647058       rs576671762       rs576892808       rs576929594       rs577160480       rs577361882       rs577468537       rs577483608       rs577548112       rs577908525       rs578005799       rs578131164       rs578147015       rs578183748       rs578251398       rs745366787       rs745385238       rs745385259       rs745478854       rs745626783       rs745862212       rs745922953       rs745932267       rs745941455       rs746140740       rs746249094       rs746253796       rs746328768       rs746549017       rs746684756       rs746718799       rs746770928       rs746827297       rs746897134       rs747078173       rs747094445       rs747303272       rs747508658       rs747553095       rs747600967       rs747677471       rs747883394       rs747886463       rs748030578       rs748033613       rs748199490       rs748207420       rs748261198       rs748441829       rs748529831       rs748821598       rs748826117       rs748911356       rs749262902       rs749313821       rs749353435       rs749408740       rs749476340       rs749512953       rs749567502       rs749588197       rs749755071       rs749900189       rs750010786       rs750150487       rs750270489       rs750428324       rs750436924       rs750531134       rs750690093       rs750786258       rs750809356       rs750990777       rs750992951       rs751049519       rs751306489       rs751341708       rs751430177       rs751592275       rs751594197       rs751773025       rs751802306       rs751973251       rs752048874       rs752143115       rs752150710       rs752212235       rs752233113       rs752484144       rs752714411       rs752736516       rs752753802       rs752843699       rs752902100       rs752939143       rs753129815       rs753298201       rs753385585       rs753574366       rs753589724       rs753627959       rs753656825       rs753663438       rs753893158       rs753975402       rs754097904       rs754190024       rs754289565       rs754416023       rs754421613       rs754449101       rs754526280       rs754564696       rs754580339       rs754614394       rs754872062       rs754914911       rs755068790       rs755253219       rs755737801       rs755959527       rs756180169       rs756208280       rs756379199       rs756389825       rs756614315       rs756632855       rs756720514       rs756875830       rs756902663       rs756972348       rs757060226       rs757133578       rs757153755       rs757350177       rs757415952       rs757499662       rs757669849       rs757725238       rs757776151       rs758104357       rs758191995       rs758301044       rs758349054       rs758445450       rs758563817       rs758603847       rs758726422       rs758760496       rs758859902       rs758890975       rs759022731       rs759112343       rs759225691       rs759245153       rs759384690       rs759628535       rs759754867       rs759796415       rs759831519       rs760064006       rs760156796       rs760246791       rs760246812       rs760363153       rs760391623       rs760481669       rs760712963       rs760777758       rs760865816       rs761102627       rs761102909       rs761301591       rs761318056       rs761481959       rs761613354       rs761678419       rs761863510       rs761961900       rs762783368       rs762905451       rs763034281       rs763188191       rs763199866       rs763240127       rs763476108       rs763552757       rs763725634       rs763790811       rs764108784       rs764345424       rs764670566       rs764703950       rs764774349       rs765275275       rs765436097       rs765534523       rs765671434       rs765785109       rs765969144       rs766238301       rs766239950       rs766313538       rs766403588       rs766419896       rs766636743       rs766728889       rs766777481       rs766815421       rs767142770       rs767454978       rs767503722       rs767574452       rs767629098       rs767700781       rs767795956       rs768036666       rs768143485       rs768273597       rs768387826       rs768389197       rs768475730       rs768548615       rs768839757       rs768893273       rs768911345       rs768929819       rs769074234       rs769187240       rs769233621       rs769234040       rs769562027       rs769648943       rs769650962       rs769742568       rs769959994       rs770062768       rs770104402       rs770239905       rs770320813       rs770442240       rs770729114       rs770795750       rs770884824       rs770888406       rs770939004       rs771073449       rs771090487       rs771093773       rs771336499       rs771424614       rs771441092       rs771769717       rs771781087       rs771784014       rs771803225       rs771889269       rs771940578       rs772166231       rs772484459       rs772502533       rs772594496       rs772795510       rs772886326       rs773008388       rs773054103       rs773166492       rs773197939       rs773560116       rs773588622       rs773647947       rs773677505       rs773960502       rs774123091       rs774230012       rs774231512       rs774415396       rs774423976       rs774733555       rs774808962       rs774915145       rs775091833       rs775177754       rs775368785       rs775545781       rs775956128       rs776045804       rs776066341       rs776145214       rs776152562       rs776237710       rs776238845       rs776515516       rs776602610       rs776611826       rs776621906       rs776711764       rs776993739       rs777075208       rs777408068       rs777539132       rs777575623       rs777752369       rs778037310       rs778062133       rs778429555       rs778464353       rs778519294       rs778519305       rs778678571       rs778694212       rs778785821       rs779364382       rs779455964       rs779825405       rs779834962       rs779837614       rs780119438       rs780142093       rs780238744       rs780354154       rs780479356       rs780514703       rs780523387       rs780584718       rs780681052       rs780690666       rs780824319       rs780912297       rs781168276       rs781285101       rs781448011       rs781452684       rs781472016       rs781714929       rs781723737       rs12278274       rs61756355       rs74050998       rs74050999       rs138262721       rs560684997       rs562355908       rs573956007       rs5789416       rs371217479       rs527518342       rs568244897      

TRIM6基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向引物Tm值
反向引物序列
反向引物Tm值
rank
CTCATCTCGGATCTGGAGC
59
GAACTCACTCCTTTCTGTGAC
58
GTGATGTCACAGAAAGGAGTG
59
CTCGGAACATACTTCTCAGC
58
TGATGTCACAGAAAGGAGTG
57
GCTCGGAACATACTTCTCAG
58
GCTCATCTCGGATCTGGAG
59
GAACTCACTCCTTTCTGTGAC
58
GATGTCACAGAAAGGAGTGAG
58
GGCTCGGAACATACTTCTC
57
CTCATCTCGGATCTGGAGC
59
CAGAACTCACTCCTTTCTGTG
58
      尚未收录相关数据

TRIM6基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 溶酶体
  • 内涵体
  • 细胞核
  • 细胞质
  • 液泡
  • 细胞膜
  • 细胞外基质
  • 内质网
  • 线粒体
  • 高尔基体
  • 细胞骨架

TRIM6基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005622
E9PFM0(UniProtKB)
IEA
GO:0008270
E9PFM0(UniProtKB)
IEA
GO:0000209
Q9C030(UniProtKB)
IEA
GO:0002230
Q9C030(UniProtKB)
IMP
GO:0002741
Q9C030(UniProtKB)
IMP
GO:0003674
Q9C030(UniProtKB)
ND
GO:0005515
Q9C030(UniProtKB)
IPI
GO:0005634
Q9C030(UniProtKB)
IEA
GO:0005737
Q9C030(UniProtKB)
IDA
GO:0005737
Q9C030(UniProtKB)
IDA
GO:0005829
Q9C030(UniProtKB)
IEA
GO:0008134
Q9C030(UniProtKB)
IEA
GO:0008270
Q9C030(UniProtKB)
IEA
GO:0010628
Q9C030(UniProtKB)
IEA
GO:0010629
Q9C030(UniProtKB)
IMP
GO:0010800
Q9C030(UniProtKB)
IMP
GO:0010994
Q9C030(UniProtKB)
IMP
GO:0016874
Q9C030(UniProtKB)
IEA
GO:0019901
Q9C030(UniProtKB)
IPI
GO:0019901
Q9C030(UniProtKB)
IPI
GO:0030674
Q9C030(UniProtKB)
IPI
GO:0032496
Q9C030(UniProtKB)
IMP
GO:0033138
Q9C030(UniProtKB)
IMP
GO:0035458
Q9C030(UniProtKB)
IMP
GO:0045071
Q9C030(UniProtKB)
IMP
GO:0045892
Q9C030(UniProtKB)
IEA
GO:0060340
Q9C030(UniProtKB)
IMP
GO:0061630
Q9C030(UniProtKB)
IMP
GO:0070206
Q9C030(UniProtKB)
IDA
GO:0098586
Q9C030(UniProtKB)
IEA
GO:1990782
Q9C030(UniProtKB)
IPI
GO:2000679
Q9C030(UniProtKB)
IMP
GO:2000737
Q9C030(UniProtKB)
IEA
GO:1901222
Q9C030(UniProtKB)
IMP
基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称

可能调控TRIM6基因的相关microRNA:     


通路基因列表
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
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