LSM2(LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)) 转至新版数据库

基因基本信息

基因基本信息

基因简称(symbol)
    [HGNC]     [GeneCards]     [NCBI]
基因种类(locus group)
同源简称(alias symbol)
基因家族代码(gene_family_id)
    [HGNC]     [GenScript]
omim代码
entrez码
    [Vega]
vega基因码
ensembl基因码
    [Ensembl]
基因家族(gene family)
refseq数据库代号

更多...

基因种类(locus_type)
基因名称状态(status)
location_sortable
同源基因名称(alias name)
基因名称批准使用时间(date_approved_reserved)
基因简称更名时间(date_symbol_changed)
基因名称更名时间(date_name_changed)
更新时间(date_modified)
ucsc码
ena
ccds数据码
uniprot数据码
pubmed代码
mgd码
rgd码
生命科学数据库(lsdb)
更新时间(date modified)
cosmic
mirbase
基因曾用简称(prev symbol)
基因曾用名称(prev name)
homeodb
cosmic
snornabase
bioparadigms slc
orphanet
假基因信息(pseudogeneorg)
horde id
merops
imgt
iuphar
kznf基因类别
mamit-trnadb
cd
LncRNA数据库
酶代码
中间纤维数据库

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基因染色体位置

基因染色体位置

6p21.3
基因染色体位置图

基因简述

基因简述

This gene encodes a member of the LSm family of RNA-binding proteins. LSm proteins form stable heteromers that bind specifically to the 3'-terminal oligo(U) tract of U6 snRNA and may play a role in pre-mRNA splicing by mediating U4/U6 snRNP formation. Pseudogenes of this gene are located on the short arm of chromosomes 6 and 19. [provided by RefSeq, Nov 2011]

[中文简述(自动翻译):]  该基因编码的LSM家族RNA结合蛋白中的一员。 LSM蛋白形成特异性结合U6 snRNA启动的3‘-末端的寡（U）道，并且可以通过介导U4 / U6核蛋白的形成起到前mRNA剪接作用稳定异聚。该基因的假基因都位于[由RefSeq的，2011年11月提供]染色体6和19的短臂

OMIM数据库中对LSM2基因的介绍     Wikipedia数据库中对LSM2基因的介绍

基因序列

基因序列

LSM2基因的碱基序列：[NCBI]

基因突变

基因突变

LSM2基因的碱基突变：           显示全部snp
rs480092       rs494718       rs523727       rs547828       rs604895       rs625421       rs681331       rs1144710       rs1150748       rs2242668       rs2736425       rs2763980       rs4711277       rs7774539       rs9279422       rs9281583       rs9296002       rs9461726       rs11304560       rs11555256       rs11964923       rs12206352       rs12212242       rs13207465       rs17201171       rs17201178       rs17207552       rs34286262       rs34606581       rs35058284       rs35215150       rs35444838       rs35537518       rs35542272       rs35577545       rs35604230       rs35770494      
rs35908977       rs58556649       rs59324322       rs60681577       rs67497292       rs68160445       rs70990280       rs71552085       rs73400280       rs74441024       rs75943791       rs76523025       rs77631579       rs111671487       rs111821299       rs111863829       rs111908252       rs112046281       rs113065708       rs113181670       rs113500265       rs113790770       rs114832009       rs115443704       rs116506298       rs116849650       rs117127906       rs117254600       rs118142743       rs137951269       rs138201316       rs138562541       rs138838575       rs139101252       rs139193891       rs139284411       rs139706229       rs139878581       rs139938004       rs140330441       rs140502585       rs140543031       rs140990450       rs141601951       rs141619096       rs141656331       rs142048851       rs142731699       rs143192176       rs143354909       rs143361970       rs143526845       rs144347766       rs144638795       rs145218504       rs145978630       rs146246745       rs146616474       rs146717832       rs146752130       rs147092028       rs147533240       rs147867329       rs147897125       rs148078585       rs148453836       rs149135246       rs149189223       rs149631472       rs149947545       rs150217762       rs150438857       rs150711228       rs151005403       rs180808559       rs181327715       rs181738124       rs182478189       rs182958310       rs183043854       rs183192644       rs183400210       rs184004642       rs184168043       rs184229371       rs184637418       rs185432341       rs185550583       rs185933079       rs186200013       rs186320679       rs187190432       rs187689420       rs187943004       rs188986181       rs190303561       rs190645956       rs190805420       rs191526609       rs191562976       rs191787075       rs192066467       rs192297805       rs192430508       rs199998896       rs200076781       rs200102484       rs200204100       rs201422522       rs201461388       rs368088325       rs368194729       rs368408935       rs369120809       rs369541467       rs371580625       rs372108276       rs372234084       rs373272554       rs373498609       rs374102841       rs375253870       rs375262468       rs375288633       rs375883236       rs375922717       rs376444564       rs376861218       rs527570664       rs528057148       rs528166362       rs528173792       rs528197182       rs528505551       rs528764483       rs528773172       rs528854834       rs529010083       rs529160918       rs529422807       rs529532783       rs529543378       rs529554774       rs530080484       rs530503952       rs531034421       rs531506493       rs531517923       rs531650183       rs532911712       rs533070321       rs533082818       rs533332917       rs533701699       rs534006070       rs534718380       rs534729458       rs534893572       rs534954769       rs535628039       rs535796809       rs535913019       rs536791983       rs536995509       rs537132025       rs537332910       rs537608259       rs539531436       rs540196183       rs540256178       rs540365438       rs541177912       rs542066918       rs542175603       rs542375098       rs543288706       rs543394851       rs543674010       rs544158419       rs544336722       rs544473819       rs545107362       rs545223289       rs545724233       rs545831478       rs546256920       rs546320211       rs546615865       rs546627790       rs547195937       rs547769576       rs547947797       rs548763067       rs548899318       rs550551632       rs550894287       rs551149579       rs551874815       rs552557585       rs552622888       rs553160084       rs553187647       rs553275292       rs553335637       rs553423756       rs553889149       rs555193818       rs555386758       rs556272736       rs556307867       rs556523595       rs556777473       rs556780990       rs556869863       rs557123129       rs557150490       rs557185449       rs557320784       rs557667840       rs557699552       rs557716739       rs557804346       rs557944491       rs559098105       rs559631783       rs559762290       rs559841879       rs560506424       rs560715059       rs560728452       rs560783583       rs560817209       rs561751517       rs561926324       rs562012685       rs562765069       rs562917392       rs563136654       rs563475469       rs564129691       rs565078880       rs565390922       rs566619976       rs566690521       rs566897986       rs567162892       rs567375914       rs567668787       rs568040748       rs568104982       rs568297184       rs568693120       rs568883434       rs569081233       rs569991291       rs570280975       rs570410932       rs570493832       rs570804916       rs571675023       rs571735511       rs572793157       rs572878332       rs572930833       rs573305540       rs573722850       rs574239684       rs574659541       rs574712319       rs574975028       rs575990879       rs576406282       rs576795011       rs576822361       rs577073870       rs577663913       rs577997270       rs746003242       rs746041084       rs746861053       rs747177399       rs747262330       rs747714348       rs748015700       rs748151571       rs748598464       rs748927360       rs748944873       rs749224140       rs749375289       rs750340681       rs750616911       rs750667979       rs751576015       rs752055014       rs752766908       rs753112690       rs753803609       rs754088399       rs754420392       rs754562494       rs755054621       rs755074100       rs755088137       rs755557127       rs755727660       rs755909452       rs756269342       rs756367500       rs757194193       rs758535485       rs758684805       rs758843914       rs759213439       rs760409284       rs761014252       rs761737610       rs762203320       rs762260981       rs762434930       rs763526825       rs764563702       rs765357943       rs766073493       rs766568873       rs767187584       rs767254415       rs767625878       rs767848738       rs767903929       rs768120418       rs768179843       rs769376699       rs769755970       rs770199476       rs771019977       rs771567458       rs771598945       rs771838168       rs771928147       rs772514785       rs772718608       rs772971205       rs773501911       rs773633630       rs773814286       rs774140291       rs774389062       rs774795596       rs774890667       rs776411022       rs776470253       rs776648487       rs777724955       rs777925579       rs777949761       rs778095866       rs778411669       rs779150329       rs779163273       rs779610802       rs779691972       rs779940277       rs779952795       rs780188073       rs781094574       rs781258285      

基因表达

基因表达

LSM2基因在不同组织中的表达：    [UniProt]

基因在不同组织中的表达图

基因引物

基因引物

正向引物序列
正向引物Tm值
反向引物序列
反向引物Tm值
rank
GGCACTGAGAACAAATGGG
59
AGAATAGAAGAGCTGGCAGAG
59
ATGCATCTGTGGAACCCTC
60
TCACTGATAACATGTGAGGGT
59
CCTCCATTCTGTGGATCAG
57
TCACTGATAACATGTGAGGG
57
TGGAACTAAAGAATGACCTGAG
58
TCACTGATAACATGTGAGGG
57
AATGACCTGAGCATCTGTG
58
GTCTGTGACACTGATGTCAG
58
CCTCCATTCTGTGGATCAG
57
CACTGATAACATGTGAGGGT
57
ATGCATCTGTGGAACCCTC
60
CTTCACTGATAACATGTGAGGG
59
TTAGACCTCAGAGCACTTCTC
59
GACAGGGCAAGACTCTCAG
60
ATGCATCTGTGGAACCCTC
60
TTCACTGATAACATGTGAGGGT
60
GCACTGAGAACAAATGGGA
58
GAATAGAAGAGCTGGCAGAG
58

转录因子

转录因子

      尚未收录相关数据

基因本体信息

LSM2基因（以及对应的蛋白质）的细胞分布位置：

[UniProt]     [GenomeNet]

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 溶酶体
  • 内涵体
  • 细胞核
  • 细胞质
  • 液泡
  • 细胞膜
  • 细胞外基质
  • 内质网
  • 线粒体
  • 高尔基体
  • 细胞骨架

LSM2基因的本体（GO）信息：

GO库代码
对应的蛋白质
来源代码
GO:0000398
Q9Y333(UniProtKB)
IBA
GO:0000398
Q9Y333(UniProtKB)
IC
GO:0000398
Q9Y333(UniProtKB)
TAS
GO:0000398
Q9Y333(UniProtKB)
TAS
GO:0000932
Q9Y333(UniProtKB)
IBA
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005515
Q9Y333(UniProtKB)
IPI
GO:0005654
Q9Y333(UniProtKB)
TAS
GO:0005654
Q9Y333(UniProtKB)
TAS
GO:0005654
Q9Y333(UniProtKB)
TAS
GO:0005654
Q9Y333(UniProtKB)
TAS
GO:0005654
Q9Y333(UniProtKB)
TAS
GO:0005654
Q9Y333(UniProtKB)
TAS
GO:0005654
Q9Y333(UniProtKB)
TAS
GO:0005654
Q9Y333(UniProtKB)
TAS
GO:0005654
Q9Y333(UniProtKB)
TAS
GO:0005654
Q9Y333(UniProtKB)
TAS
GO:0005688
Q9Y333(UniProtKB)
IBA
GO:0005829
Q9Y333(UniProtKB)
TAS
GO:0005829
Q9Y333(UniProtKB)
TAS
GO:0017070
Q9Y333(UniProtKB)
NAS
GO:0017160
Q9Y333(UniProtKB)
IPI
GO:0043928
Q9Y333(UniProtKB)
TAS
GO:0044822
Q9Y333(UniProtKB)
IDA
GO:0044822
Q9Y333(UniProtKB)
IDA
GO:0046540
Q9Y333(UniProtKB)
IBA
GO:0071011
Q9Y333(UniProtKB)
IBA
GO:0071013
Q9Y333(UniProtKB)
IDA
GO:1990726
Q9Y333(UniProtKB)
IBA
GO:0003723
Q9Y333(UniProtKB)
IBA

基因相互作用关系

基因相互作用关系

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称

基因相关microRNA

基因相关microRNA

可能调控LSM2基因的相关microRNA：     

基因通路图

基因通路图

基因的通路属性图
通路基因列表

基因相关疾病

基因相关疾病

疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Lupus Erythematosus, Systemic 0.004810009 10 0 BeFree_GAD
Spinal Muscular Atrophy 0.003800186 14 0 BeFree
Malignant neoplasm of breast 0.002367032 1 0 GAD
Mixed Connective Tissue Disease 0.001357209 5 0 BeFree
Retinitis Pigmentosa 0.000814326 3 0 BeFree
Amyotrophic Lateral Sclerosis 0.000542884 2 0 BeFree
Autoimmune Diseases 0.000271442 1 0 BeFree
Connective Tissue Diseases 0.000271442 1 0 BeFree
Down Syndrome 0.000271442 1 0 BeFree
Herpes Simplex Infections 0.000271442 1 0 BeFree
HIV Infections 0.000271442 1 0 BeFree
Poliomyelitis 0.000271442 1 0 BeFree
Motor Neuron Disease 0.000271442 1 0 BeFree
Miller Dieker syndrome 0.000271442 1 0 BeFree
Carcinogenesis 0.000271442 1 0 BeFree
Myoclonic Epilepsies, Progressive 0.000271442 1 0 BeFree
Autoimmune Lymphoproliferative Syndrome 0.000271442 1 0 BeFree
MICROCEPHALIC OSTEODYSPLASTIC PRIMORDIAL DWARFISM, TYPE I 0.000271442 1 0 BeFree
Parvovirus B19 (disease) 0.000271442 1 0 BeFree

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