CTHRC1(collagen triple helix repeat containing 1)

基因基本信息

基因基本信息

基因简称(symbol)
    [HGNC]     [GeneCards]     [NCBI]
基因种类(locus group)
同源简称(alias symbol)
基因家族代码(gene_family_id)
    [HGNC]     [GenScript]
omim代码
entrez码
    [Vega]
vega基因码
ensembl基因码
    [Ensembl]
基因家族(gene family)
refseq数据库代号

更多...

基因种类(locus_type)
基因名称状态(status)
location_sortable
同源基因名称(alias name)
基因名称批准使用时间(date_approved_reserved)
基因简称更名时间(date_symbol_changed)
基因名称更名时间(date_name_changed)
更新时间(date_modified)
ucsc码
ena
ccds数据码
uniprot数据码
pubmed代码
mgd码
rgd码
生命科学数据库(lsdb)
更新时间(date modified)
cosmic
mirbase
基因曾用简称(prev symbol)
基因曾用名称(prev name)
homeodb
cosmic
snornabase
bioparadigms slc
orphanet
假基因信息(pseudogeneorg)
horde id
merops
imgt
iuphar
kznf基因类别
mamit-trnadb
cd
LncRNA数据库
酶代码
中间纤维数据库

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基因染色体位置

基因染色体位置

8q22.3
基因染色体位置图

基因简述

基因简述

This locus encodes a protein that may play a role in the cellular response to arterial injury through involvement in vascular remodeling. Mutations at this locus have been associated with Barrett esophagus and esophageal adenocarcinoma. Alternatively spliced transcript variants have been described. [provided by RefSeq, Jan 2012]

[中文简述(自动翻译):]  这座编码可以通过在血管重塑的参与，以动脉损伤的细胞反应中发挥作用的蛋白质。在这个位点突变与Barrett食管和食管腺癌相关联。可变剪接转录物变体已有描述。 [由RefSeq的，2012年1月提供]

OMIM数据库中对CTHRC1基因的介绍     Wikipedia数据库中对CTHRC1基因的介绍

基因序列

基因序列

CTHRC1基因的碱基序列：[NCBI]

基因突变

基因突变

CTHRC1基因的碱基突变：           显示全部snp
rs827600       rs2575689       rs2575690       rs2575691       rs2575692       rs2575693       rs2575694       rs2575695       rs2687348       rs2687350       rs2687358       rs2687361       rs2687364       rs2917546       rs2917547       rs2917548       rs2917549       rs2917551       rs2948446       rs3098228       rs3098229       rs3098230       rs3098232       rs3098233       rs3133799       rs3133800       rs3736051       rs3736052       rs6468870       rs6984377       rs6995597       rs6995610       rs7820071       rs7820626       rs7825198       rs7836218       rs7838990      
rs7844075       rs7845210       rs10588869       rs11985002       rs13278335       rs16870382       rs28437723       rs33982219       rs35500845       rs35877609       rs36063729       rs36115601       rs62525556       rs62525557       rs62525558       rs67859775       rs72124849       rs72675433       rs73286074       rs74370134       rs74496760       rs74728199       rs75195860       rs75858227       rs76439642       rs76552709       rs76699298       rs77434982       rs77737412       rs77776607       rs78179740       rs78566953       rs78792460       rs78898241       rs79242396       rs79440391       rs79684208       rs80192912       rs80346649       rs111649208       rs112828805       rs112907293       rs113052966       rs113092343       rs113436944       rs113614259       rs113829152       rs114229337       rs114456767       rs114732388       rs115396690       rs115945247       rs116193689       rs116264613       rs116319535       rs116908063       rs117325415       rs117447275       rs137890696       rs137979744       rs137984081       rs138767321       rs138781893       rs139388728       rs140375839       rs140568984       rs140897895       rs140937073       rs140965033       rs141003793       rs141043604       rs141335365       rs141428810       rs141664320       rs141952865       rs142756200       rs142957405       rs143448526       rs143592448       rs143595509       rs143637472       rs143676773       rs144320802       rs144736743       rs144859336       rs144873677       rs144912347       rs145062750       rs145066043       rs145167499       rs145549155       rs145722690       rs145838701       rs145881116       rs146221155       rs146609679       rs146790327       rs146824354       rs147165970       rs147175675       rs147418120       rs147496994       rs147533472       rs147914468       rs147964672       rs147987943       rs148248052       rs148320662       rs148565489       rs148885874       rs149006532       rs149327125       rs149662990       rs150381276       rs150701012       rs151022677       rs151038767       rs181033698       rs181428782       rs181675792       rs181775784       rs181937477       rs182119819       rs182582853       rs183927233       rs184026982       rs184190257       rs184616892       rs184733908       rs185277407       rs185438269       rs185542915       rs185692077       rs186485520       rs186808748       rs186815658       rs187079648       rs187099601       rs187299788       rs188061785       rs188170535       rs188327199       rs188821211       rs189493617       rs189608046       rs189716470       rs190140017       rs190248137       rs190297422       rs190530779       rs191028730       rs191588475       rs191647701       rs191688677       rs191820376       rs191938174       rs192252436       rs192450444       rs192937831       rs192968035       rs199537798       rs199777983       rs200589758       rs200684524       rs201319279       rs201468963       rs202169210       rs202181455       rs202192964       rs369008583       rs369379376       rs369875487       rs370183649       rs371039342       rs371102040       rs371703105       rs373203731       rs373270067       rs373415883       rs373790408       rs373833211       rs374084026       rs374230888       rs374472802       rs374538050       rs375282890       rs376472345       rs376856799       rs377662370       rs387907029       rs527344112       rs527395911       rs527712648       rs528340229       rs528377216       rs528535460       rs529323406       rs529710081       rs529763698       rs529868676       rs530112313       rs530878603       rs530881624       rs530961044       rs531041475       rs531329070       rs532013443       rs532049208       rs532172947       rs532208637       rs533227345       rs533385682       rs533398077       rs533497534       rs533547163       rs534200107       rs534366761       rs534397080       rs534728834       rs534917849       rs535592089       rs535778380       rs535946793       rs536028095       rs536286024       rs536728195       rs537155490       rs537166798       rs538324163       rs538355519       rs538486907       rs538511205       rs538545009       rs538773438       rs539496084       rs539524790       rs539691257       rs539717711       rs539754128       rs539894020       rs540356293       rs540517122       rs540717805       rs541312925       rs541349211       rs541406150       rs541585288       rs541936339       rs541959830       rs542806029       rs543004463       rs544572928       rs545154633       rs545935914       rs546224866       rs546226454       rs546285910       rs546347357       rs546840748       rs547797196       rs547931415       rs547962778       rs548129713       rs548865806       rs549091425       rs549284598       rs549360031       rs549658777       rs550253842       rs550486218       rs552108687       rs552936154       rs553295083       rs554009213       rs554230468       rs554274607       rs554840179       rs555036987       rs555475026       rs556221481       rs556298581       rs556481909       rs556503633       rs556656422       rs556664168       rs556737079       rs556757186       rs556795847       rs557696226       rs557734823       rs557986001       rs557987913       rs559231938       rs559307093       rs560079350       rs560096434       rs560238902       rs560258837       rs560544651       rs561678704       rs562292670       rs562316364       rs562478749       rs562651309       rs562882412       rs563010329       rs565788037       rs565790876       rs565870857       rs565934161       rs566157942       rs566324833       rs566364000       rs567108836       rs567472800       rs567584446       rs567634718       rs568222151       rs568659165       rs568721001       rs568744995       rs568815719       rs569702294       rs569863305       rs570009883       rs570131493       rs570475213       rs570898419       rs570961809       rs571044975       rs571108775       rs571108843       rs571309198       rs571331947       rs571435249       rs572134701       rs572196622       rs572338052       rs572457431       rs573058739       rs573348995       rs573612540       rs574216999       rs574569323       rs574632865       rs574834289       rs574942938       rs575106689       rs575491254       rs575987865       rs576052868       rs576166763       rs576326403       rs576687281       rs576687666       rs577392969       rs577916531       rs745324993       rs745592110       rs745635658       rs745828427       rs745879862       rs746538268       rs746901634       rs747313008       rs747437502       rs747586069       rs747888820       rs748020101       rs748246741       rs748382570       rs748845861       rs748968872       rs749448992       rs749814525       rs750559913       rs750615097       rs750617028       rs751608144       rs751621588       rs752084339       rs752259371       rs752314794       rs752656527       rs752775043       rs752783129       rs753249581       rs753401752       rs753600909       rs753634439       rs753794152       rs753921011       rs753984040       rs754082574       rs754161448       rs754161630       rs754572875       rs754627863       rs754880047       rs754897420       rs755392681       rs755445506       rs755644928       rs756063602       rs756369288       rs756872409       rs757169455       rs757420039       rs757475049       rs757992045       rs758556833       rs758780981       rs759365776       rs759408131       rs759580077       rs759883546       rs760330177       rs760444015       rs760692453       rs760875512       rs761002456       rs761116465       rs761452801       rs761583037       rs761868024       rs761926691       rs762535473       rs762700014       rs762922336       rs762976142       rs763118215       rs763322692       rs763680532       rs764064307       rs764192748       rs764245969       rs764595813       rs764820491       rs765155238       rs765386910       rs766177216       rs766234926       rs767061518       rs767222709       rs767275808       rs767599276       rs767655755       rs767725797       rs768079876       rs768153022       rs768415647       rs769013702       rs769101248       rs769625099       rs769689069       rs769890624       rs770249018       rs770323100       rs770826956       rs770966489       rs771540899       rs771956187       rs772011261       rs772240481       rs772449526       rs772990788       rs773075153       rs773520038       rs773573431       rs773737918       rs773861122       rs774141095       rs774579022       rs774596955       rs775098206       rs775288902       rs775361593       rs775902422       rs776145170       rs776239464       rs776352520       rs776397159       rs776856232       rs776981155       rs777119029       rs777739644       rs778093567       rs778471255       rs778597808       rs778614680       rs778869312       rs778995847       rs779461062       rs779641659       rs779702818       rs779842417       rs779856790       rs780649365       rs780761114       rs781221924       rs781431871       rs781609744       rs781701664       rs781710038       rs869236797      

基因表达

基因表达

CTHRC1基因在不同组织中的表达：    [UniProt]

基因在不同组织中的表达图

基因引物

基因引物

正向引物序列
正向引物Tm值
反向引物序列
反向引物Tm值
rank
CACTTCTTCTGTGGAAGGAC
58
TCTGAACAAGTACCAACCCA
58
GCACTTCTTCTGTGGAAGG
59
CTGAACAAGTACCAACCCAG
59
CACCCAACTACAAGCAGTG
59
CTTTGTAAATGTACACTCCGCA
59
GCATCACAGTCAAGCTACG
59
TCCATTATACTTCCCACAGATGAG
60
GTGGACCTGTATAATGGAATGTG
59
TTTGAATCCATCCCGACCT
59
ATCACAGTCAAGCTACGGG
60
TCCATTATACTTCCCACAGATGAG
60
AAACAGTTTCCAGGAAACTGG
59
AGCACATTCCATTATACTTCCC
58
CACTTCTTCTGTGGAAGGAC
58
TCTGAACAAGTACCAACCCA
59
CACCCAACTACAAGCAGTG
59
TCTTTGTAAATGTACACTCCGC
59
GCACTTCTTCTGTGGAAGG
58
CTGAACAAGTACCAACCCAG
58

转录因子

转录因子

      尚未收录相关数据

基因本体信息

CTHRC1基因（以及对应的蛋白质）的细胞分布位置：

[UniProt]     [GenomeNet]

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 溶酶体
  • 内涵体
  • 细胞核
  • 细胞质
  • 液泡
  • 细胞膜
  • 细胞外基质
  • 内质网
  • 线粒体
  • 高尔基体
  • 细胞骨架

CTHRC1基因的本体（GO）信息：

GO库代码
对应的蛋白质
来源代码
GO:0005109
Q96CG8(UniProtKB)
IEA
GO:0005578
Q96CG8(UniProtKB)
IEA
GO:0005581
Q96CG8(UniProtKB)
IEA
GO:0005615
Q96CG8(UniProtKB)
IDA
GO:0005737
Q96CG8(UniProtKB)
IEA
GO:0016477
Q96CG8(UniProtKB)
IEA
GO:0017147
Q96CG8(UniProtKB)
IEA
GO:0032092
Q96CG8(UniProtKB)
IEA
GO:0033690
Q96CG8(UniProtKB)
IEA
GO:0043932
Q96CG8(UniProtKB)
IEA
GO:0045669
Q96CG8(UniProtKB)
IEA
GO:0060071
Q96CG8(UniProtKB)
IEA
GO:0060122
Q96CG8(UniProtKB)
IEA
GO:0090090
Q96CG8(UniProtKB)
IEA
GO:0090103
Q96CG8(UniProtKB)
IEA
GO:0090177
Q96CG8(UniProtKB)
IEA

基因相互作用关系

基因相互作用关系

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称

基因相关microRNA

基因相关microRNA

可能调控CTHRC1基因的相关microRNA：     

基因通路图

基因通路图

基因的通路属性图
通路基因列表

基因相关疾病

基因相关疾病

疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Neoplasm Metastasis 0.001900093 7 0 BeFree
Malignant neoplasm of breast 0.001085767 4 0 BeFree
melanoma 0.001085767 4 0 BeFree
Breast Carcinoma 0.001085767 4 0 BeFree
Malignant neoplasm of stomach 0.000814326 3 0 BeFree
Carcinogenesis 0.000814326 3 0 BeFree
Stomach Carcinoma 0.000814326 3 0 BeFree
Arthritis 0.000271442 1 0 BeFree
Rheumatoid Arthritis 0.000271442 1 0 BeFree
Barrett Esophagus 0.000271442 1 0 BeFree
Malignant tumor of colon 0.000271442 1 0 BeFree
Non-Small Cell Lung Carcinoma 0.000271442 1 0 BeFree
Squamous cell carcinoma 0.000271442 1 0 BeFree
Colorectal Carcinoma 0.000271442 1 0 BeFree
Keloid 0.000271442 1 0 BeFree
Muscular Dystrophy 0.000271442 1 0 BeFree
Pulmonary Fibrosis 0.000271442 1 0 BeFree
Malignant neoplasm of mouth 0.000271442 1 0 BeFree
Lip and Oral Cavity Carcinoma 0.000271442 1 0 BeFree
Pancreatic carcinoma 0.000271442 1 0 BeFree
Gastrointestinal Stromal Tumors 0.000271442 1 0 BeFree
Metastatic melanoma 0.000271442 1 0 BeFree
Adenocarcinoma Of Esophagus 0.000271442 1 0 BeFree
Solid tumour 0.000271442 1 0 BeFree
Malignant neoplasm of pancreas 0.000271442 1 0 BeFree
Secondary malignant neoplasm of lymph node 0.000271442 1 0 BeFree
Colon Carcinoma 0.000271442 1 0 BeFree
Colorectal Cancer 0.000271442 1 0 BeFree
CRANIOMETAPHYSEAL DYSPLASIA, AUTOSOMAL DOMINANT 0.000271442 1 0 BeFree
Liver carcinoma 0.000271442 1 0 BeFree
Dysferlinopathy 0.000271442 1 0 BeFree

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