OPN1SW(opsin 1 (cone pigments), short-wave-sensitive)

基因基本信息

基因基本信息

基因简称(symbol)
    [HGNC]     [GeneCards]     [NCBI]
基因种类(locus group)
同源简称(alias symbol)
基因家族代码(gene_family_id)
    [HGNC]     [GenScript]
omim代码
entrez码
    [Vega]
vega基因码
ensembl基因码
    [Ensembl]
基因家族(gene family)
refseq数据库代号

更多...

基因种类(locus_type)
基因名称状态(status)
location_sortable
同源基因名称(alias name)
基因名称批准使用时间(date_approved_reserved)
基因简称更名时间(date_symbol_changed)
基因名称更名时间(date_name_changed)
更新时间(date_modified)
ucsc码
ena
ccds数据码
uniprot数据码
pubmed代码
mgd码
rgd码
生命科学数据库(lsdb)
更新时间(date modified)
cosmic
mirbase
基因曾用简称(prev symbol)
基因曾用名称(prev name)
homeodb
cosmic
snornabase
bioparadigms slc
orphanet
假基因信息(pseudogeneorg)
horde id
merops
imgt
iuphar
kznf基因类别
mamit-trnadb
cd
LncRNA数据库
酶代码
中间纤维数据库

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基因染色体位置

基因染色体位置

7q31.3-q32
基因染色体位置图

基因简述

基因简述

This gene belongs to the G-protein coupled receptor 1 family, opsin subfamily. It encodes the blue cone pigment gene which is one of three types of cone photoreceptors responsible for normal color vision. Defects in this gene are the cause of tritan color blindness (tritanopia). Affected individuals lack blue and yellow sensory mechanisms while retaining those for red and green. Defective blue vision is characteristic. [provided by RefSeq, Jul 2008]

[中文简述(自动翻译):]  该基因属于G-蛋白偶联受体1家族，视蛋白亚家族。它编码蓝色锥体颜料基因，其是三种负责正常色觉锥光感受器中的一个。这种基因缺陷是特里坦色盲（蓝色盲）的原因。受影响的个人缺乏蓝色和黄色的感官机制，同时保留那些红色和绿色。有缺陷的蓝色愿景是特点。 [由RefSeq的，2008年7月提供]

OMIM数据库中对OPN1SW基因的介绍     Wikipedia数据库中对OPN1SW基因的介绍

基因序列

基因序列

OPN1SW基因的碱基序列：[NCBI]

基因突变

基因突变

OPN1SW基因的碱基突变：           显示全部snp
rs1688905       rs1688906       rs1868774       rs2402937       rs7792925       rs12112071       rs78532499       rs79158266       rs104894033       rs113569143       rs116699212       rs117607581       rs138093200       rs140313670       rs140568559       rs141167245       rs143205154       rs144995754       rs145104722       rs146689090       rs150426624       rs180902396       rs181395003       rs181833432       rs184461423       rs189168873       rs190617412       rs200091747       rs200610158       rs201497890       rs202221519       rs367791096       rs368257791       rs369667942       rs371641480       rs371754125       rs372630661      
rs374287355       rs374687514       rs374829961       rs375615377       rs376052530       rs376418066       rs397748997       rs527925248       rs531679811       rs533412722       rs534495056       rs537570999       rs540420837       rs544210051       rs544600148       rs545326925       rs549495079       rs551741211       rs552655829       rs553708996       rs555231478       rs556207935       rs556241656       rs558064192       rs560402413       rs560414643       rs562316580       rs565571318       rs566674140       rs566770860       rs567648628       rs569192851       rs570956146       rs573702163       rs577258091       rs746263470       rs746544692       rs747346814       rs748430460       rs748885887       rs750190072       rs750959685       rs751647679       rs753699287       rs753945979       rs754179078       rs754610955       rs755095845       rs755147227       rs756478157       rs758082130       rs758893514       rs759166292       rs759267524       rs760453883       rs760540443       rs761085643       rs761251666       rs761743897       rs761820315       rs761929389       rs763022335       rs763991421       rs764661394       rs764886274       rs765405779       rs765407100       rs766098579       rs766333729       rs766593404       rs766676365       rs767387479       rs767442078       rs768201708       rs768216743       rs769238341       rs769538354       rs771228886       rs771601968       rs772026384       rs772553185       rs773064809       rs773423213       rs773873073       rs775045727       rs775371854       rs775599996       rs775611802       rs776133013       rs776523473       rs776857192       rs777352208       rs777541057       rs778128511       rs778625008       rs778992822       rs779283336       rs779670884       rs780447000       rs339038       rs339039       rs339040       rs339041       rs762657       rs762658       rs762659       rs1799922       rs3807128       rs7803604       rs10262646       rs17397588       rs17476081       rs35893393       rs45486505       rs55974922       rs55985730       rs60792859       rs62479596       rs62617076       rs67738450       rs73238105       rs73238106       rs73238109       rs73238110       rs73467169       rs73467172       rs74512884       rs74652146       rs74947853       rs77520011       rs77697093       rs104894031       rs104894032       rs111528380       rs112715928       rs113302345       rs113391851       rs114296235       rs114415108       rs114644741       rs115729952       rs116508298       rs138123241       rs138675255       rs139135756       rs139477114       rs140464762       rs141288412       rs141305506       rs141770175       rs143150301       rs143165830       rs143200949       rs143378646       rs143783128       rs143817931       rs144524727       rs146420285       rs146564351       rs146677818       rs146986222       rs148243232       rs148455631       rs148984935       rs149847165       rs149905751       rs150165356       rs150488588       rs150585695       rs151302719       rs181084929       rs182257917       rs182882046       rs183100738       rs184257053       rs184428658       rs185373190       rs185519564       rs185999308       rs186121008       rs187706553       rs190323574       rs190603912       rs191364408       rs191691952       rs193151232       rs199617151       rs199778066       rs199940506       rs200180187       rs200392955       rs200504235       rs200777523       rs201129388       rs201376061       rs201738858       rs201892828       rs202015927       rs367847421       rs367947849       rs367950991       rs368059031       rs368072102       rs368447870       rs370330830       rs370516368       rs370732547       rs370917485       rs371081478       rs372352221       rs373496991       rs373613787       rs373666894       rs374115317       rs374350361       rs374560800       rs375076605       rs375118323       rs376561891       rs376813350       rs377490003       rs527756031       rs528136578       rs529496157       rs530090242       rs530436123       rs531407557       rs531596852       rs532162623       rs532611956       rs533335284       rs533351096       rs533679587       rs534206903       rs535036173       rs535238782       rs535306956       rs535409767       rs535874516       rs537495967       rs538034048       rs538207185       rs538316333       rs539655783       rs539800200       rs540242190       rs541573349       rs541613786       rs542023139       rs542982108       rs543994078       rs544358512       rs546953399       rs547828333       rs549522358       rs551502141       rs553213383       rs553431834       rs553496521       rs553839441       rs555441449       rs555685046       rs557163015       rs557275663       rs557891814       rs559471387       rs559813088       rs561612919       rs562833441       rs564158425       rs565577218       rs565766083       rs566440181       rs567382603       rs567546923       rs568658273       rs568669975       rs569661836       rs571022857       rs571282603       rs572723188       rs572919270       rs573560238       rs574604549       rs574622409       rs575486015       rs575548891       rs576602931       rs576631150       rs576687362       rs745463914       rs745647247       rs745696804       rs746061098       rs746791972       rs746881691       rs747311766       rs747403571       rs747486359       rs747966331       rs748309609       rs748511114       rs749006905       rs749665821       rs750503736       rs750736619       rs751088647       rs751321716       rs751343993       rs751349153       rs751891246       rs752221159       rs752374184       rs752466106       rs753831565       rs753897797       rs753929816       rs754233561       rs754540780       rs754666536       rs754691529       rs754868961       rs755460627       rs755636864       rs756329878       rs756422043       rs756830424       rs756986274       rs757431387       rs757454413       rs757947115       rs758046435       rs758249724       rs759042880       rs759095941       rs759644755       rs759971925       rs760023341       rs760091228       rs760585811       rs760593376       rs760632132       rs760831035       rs760942735       rs761520019       rs761554089       rs761659836       rs761878091       rs762189837       rs762653695       rs763008244       rs763463416       rs763861596       rs763962437       rs764109090       rs764582600       rs764817802       rs765172847       rs765180645       rs765752010       rs765766614       rs765858867       rs766191391       rs766223162       rs767165831       rs767225533       rs767712436       rs767847284       rs768624742       rs768664716       rs768901617       rs769004186       rs769049906       rs769439346       rs769778120       rs769883020       rs770189649       rs770406105       rs770459023       rs770591659       rs770685159       rs770906228       rs771106599       rs771317062       rs772110779       rs772170128       rs772199291       rs772985595       rs773095062       rs773124378       rs773353839       rs774369888       rs774992971       rs775018062       rs775498016       rs775757978       rs775951590       rs776068698       rs776183647       rs776781818       rs777136429       rs777231081       rs777586309       rs777850656       rs777894700       rs778105835       rs778250238       rs778295223       rs779114339       rs779294523       rs779334334       rs779614739       rs779743701       rs780088292       rs780219356       rs780808284       rs780809135       rs781480382       rs781617916      

基因表达

基因表达

OPN1SW基因在不同组织中的表达：    [UniProt]

基因在不同组织中的表达图

基因引物

基因引物

正向引物序列
正向引物Tm值
反向引物序列
反向引物Tm值
rank
GTAACGGATACTTCGTCTTCG
59
ATCCTGTAACCAGACCTGC
59
TAACGGATACTTCGTCTTCG
57
CATCCTGTAACCAGACCTG
57
TGCTTCATGAATAAGCAGTTCC
59
GCATGTGTCGGATTCATCTG
60

转录因子

转录因子

      尚未收录相关数据

基因本体信息

OPN1SW基因（以及对应的蛋白质）的细胞分布位置：

[UniProt]     [GenomeNet]

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 溶酶体
  • 内涵体
  • 细胞核
  • 细胞质
  • 液泡
  • 细胞膜
  • 细胞外基质
  • 内质网
  • 线粒体
  • 高尔基体
  • 细胞骨架

OPN1SW基因的本体（GO）信息：

GO库代码
对应的蛋白质
来源代码
GO:0001523
P03999(UniProtKB)
TAS
GO:0001750
P03999(UniProtKB)
IBA
GO:0004872
P03999(UniProtKB)
TAS
GO:0005887
P03999(UniProtKB)
TAS
GO:0007165
P03999(UniProtKB)
TAS
GO:0007186
P03999(UniProtKB)
IBA
GO:0007601
P03999(UniProtKB)
IEA
GO:0007602
P03999(UniProtKB)
IEA
GO:0008020
P03999(UniProtKB)
IBA
GO:0009584
P03999(UniProtKB)
IEA
GO:0018298
P03999(UniProtKB)
IEA
GO:0042622
P03999(UniProtKB)
TAS
GO:0042622
P03999(UniProtKB)
TAS
GO:0042622
P03999(UniProtKB)
TAS
GO:0042622
P03999(UniProtKB)
TAS
GO:0042622
P03999(UniProtKB)
TAS
GO:0042622
P03999(UniProtKB)
TAS
GO:0042622
P03999(UniProtKB)
TAS
GO:0042622
P03999(UniProtKB)
TAS
GO:0042622
P03999(UniProtKB)
TAS
GO:0071482
P03999(UniProtKB)
IBA

基因相互作用关系

基因相互作用关系

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称

基因相关microRNA

基因相关microRNA

可能调控OPN1SW基因的相关microRNA：     

基因通路图

基因通路图

基因的通路属性图
通路基因列表

基因相关疾病

基因相关疾病

疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Color Blindness, Blue 0.482638474 2 3 BeFree_CLINVAR_CTD_human_GAD_ORPHANET_UNIPROT
Color vision defect 0.002995792 2 4 BeFree_LHGDN
Acute lymphocytic leukemia 0.002714419 10 0 BeFree
leukemia 0.002442977 9 0 BeFree
Retinal Diseases 0.002367032 1 0 GAD
Hepatitis B 0.002171535 8 0 BeFree
Precursor Cell Lymphoblastic Leukemia Lymphoma 0.001900093 7 0 BeFree
Neoplasm, Residual 0.001357209 5 0 BeFree
Myeloid Leukemia, Chronic 0.001085767 4 0 BeFree
Leukemogenesis 0.001085767 4 0 BeFree
Precursor T-Cell Lymphoblastic Leukemia-Lymphoma 0.001085767 4 0 BeFree
Leukemia, Myelocytic, Acute 0.000814326 3 0 BeFree
Malignant Childhood Neoplasm 0.000814326 3 0 BeFree
Primary Effusion Lymphoma 0.000814326 3 0 BeFree
Liver carcinoma 0.000814326 3 0 BeFree
Mixed phenotype acute leukemia 0.000814326 3 0 BeFree
Blast Phase 0.000542884 2 0 BeFree
Glioblastoma 0.000542884 2 0 BeFree
Leukemia, Lymphocytic, Acute, L1 0.000542884 2 0 BeFree
Liver Cirrhosis 0.000542884 2 0 BeFree
Liver diseases 0.000542884 2 0 BeFree
Kaposi Sarcoma 0.000542884 2 0 BeFree
B-Cell Lymphomas 0.000542884 2 0 BeFree
Severe Combined Immunodeficiency 0.000542884 2 0 BeFree
Adenocarcinoma of lung (disorder) 0.000542884 2 0 BeFree
Hepatitis B, Chronic 0.000542884 2 0 BeFree
Precursor B-cell lymphoblastic leukemia 0.000542884 2 0 BeFree
MULTICYSTIC RENAL DYSPLASIA, BILATERAL 0.000542884 2 0 BeFree
Anxiety Disorders 0.000271442 1 0 BeFree
Choriocarcinoma 0.000271442 1 0 BeFree
Congenital chromosomal disease 0.000271442 1 0 BeFree
Down Syndrome 0.000271442 1 0 BeFree
Fibromuscular Dysplasia 0.000271442 1 0 BeFree
Hepatitis 0.000271442 1 0 BeFree
Hepatitis A 0.000271442 1 0 BeFree
Lymphoid leukemia 0.000271442 1 0 BeFree
Acute biphenotypic leukemia 0.000271442 1 0 BeFree
Precursor B-Cell Lymphoblastic Leukemia-Lymphoma 0.000271442 1 0 BeFree
Lymphoma 0.000271442 1 0 BeFree
Osteosarcoma 0.000271442 1 0 BeFree
Adenomatous Polyposis Coli 0.000271442 1 0 BeFree
Diffuse Large B-Cell Lymphoma 0.000271442 1 0 BeFree
X-linked agammaglobulinemia 0.000271442 1 0 BeFree
Malignant neoplasm of lung 0.000271442 1 0 BeFree
Age related macular degeneration 0.000271442 1 0 BeFree
Coinfection 0.000271442 1 0 BeFree
Acute type B viral hepatitis 0.000271442 1 0 BeFree
Cervix carcinoma 0.000271442 1 0 BeFree
Malignant lymphoma, lymphocytic, intermediate differentiation, diffuse 0.000271442 1 0 BeFree
Hematologic Neoplasms 0.000271442 1 0 BeFree
Carcinoma of lung 0.000271442 1 0 BeFree
Adult Acute Lymphocytic Leukemia 0.000271442 1 0 BeFree
Philadelphia chromosome positive 0.000271442 1 0 BeFree
Sarcoma 0.000271442 1 0 BeFree
Childhood Leukemia 0.000271442 1 0 BeFree
Geographic Atrophy 0.000271442 1 0 BeFree
Glioblastoma Multiforme 0.000271442 1 0 BeFree
Cirrhosis 0.000271442 1 0 BeFree
Acute-On-Chronic Liver Failure 0.000271442 1 0 BeFree

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