GALNT9(polypeptide N-acetylgalactosaminyltransferase 9) 转至新版数据库

基因简称(symbol)
    [HGNC]     [GeneCards]     [NCBI]
基因种类(locus group)
同源简称(alias symbol)
基因家族代码(gene_family_id)
    [HGNC]     [GenScript]
omim代码
entrez码
    [Vega]
vega基因码
ensembl基因码
    [Ensembl]
基因家族(gene family)
refseq数据库代号

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基因种类(locus_type)
基因名称状态(status)
location_sortable
同源基因名称(alias name)
基因名称批准使用时间(date_approved_reserved)
基因简称更名时间(date_symbol_changed)
基因名称更名时间(date_name_changed)
更新时间(date_modified)
ucsc码
ena
ccds数据码
uniprot数据码
pubmed代码
mgd码
rgd码
生命科学数据库(lsdb)
更新时间(date modified)
cosmic
mirbase
基因曾用简称(prev symbol)
基因曾用名称(prev name)
homeodb
cosmic
snornabase
bioparadigms slc
orphanet
假基因信息(pseudogeneorg)
horde id
merops
imgt
iuphar
kznf基因类别
mamit-trnadb
cd
LncRNA数据库
酶代码
中间纤维数据库

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12q24.33
基因染色体位置图

This gene encodes a member of the UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase (GalNAc-T) family of enzymes. GalNAc-Ts initiate mucin-type O-linked glycosylation in the Golgi apparatus by catalyzing the transfer of GalNAc to serine and threonine residues on target proteins. They are characterized by an N-terminal transmembrane domain, a stem region, a lumenal catalytic domain containing a GT1 motif and Gal/GalNAc transferase motif, and a C-terminal ricin/lectin-like domain. GalNAc-Ts have different, but overlapping, substrate specificities and patterns of expression. This gene is expressed specifically in the brain, with highest expression in the cerebellum. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

[中文简述(自动翻译):]  此基因编码UDP-N-乙酰基的α-D-半乳糖胺的成员:多肽N-二acetylgalactosaminyltransferase胺(GalNAc-T)的酶家族。的GalNAc-TS通过催化将GalNAc转移到丝氨酸和苏氨酸残基的目标蛋白启动在高尔基体的粘蛋白型O-连接的糖基化。它们通过N-末端跨膜结构域,一个干区,含有GT1基序和Gal /半乳糖胺转移酶基序的腔催化结构域和C-末端蓖麻/凝集素样结构域为特征。半乳糖胺-TS有不同,但重叠的底物特异性和表达模式。该基因是在大脑中特异表达,在小脑最高表达。已发现该基因编码不同亚型的多个抄本变形。 [由RefSeq的,2008年7月提供]

GALNT9基因的碱基序列:[NCBI]
GALNT9基因的碱基突变:           显示全部snp
rs3935241       rs3935242       rs3935243       rs3935476       rs3935477       rs4074044       rs4074045       rs4074046       rs4074185       rs4077836       rs4077838       rs6598205       rs6598206       rs7297357       rs7310160       rs7485291       rs7485305       rs7486098       rs7486927       rs7487493       rs7953158       rs7958695       rs7961948       rs7966851       rs7979100       rs10736915       rs10736916       rs10794455       rs10794456       rs10794457       rs10794458       rs10794459       rs10902508       rs10902509       rs10902510       rs10902511       rs10902512      
rs11246984       rs11246985       rs11246986       rs11246988       rs11246989       rs11246990       rs11246991       rs11246992       rs11246993       rs11246994       rs11246995       rs11246996       rs11246997       rs11246998       rs11409315       rs11439802       rs11836440       rs11836660       rs11837994       rs12306514       rs12308155       rs12308452       rs12309593       rs12369808       rs12370221       rs12424637       rs34047036       rs34101219       rs34329783       rs34570945       rs34643821       rs34696271       rs34976316       rs35117555       rs35434786       rs35454794       rs35830632       rs56331705       rs57319989       rs57784041       rs58114290       rs58139248       rs58458586       rs59310537       rs59907757       rs60465054       rs61329617       rs61571976       rs61738583       rs61742573       rs61742577       rs61745412       rs61745414       rs61745417       rs61943886       rs61943887       rs61943888       rs67220932       rs67688301       rs68095670       rs73166822       rs73166823       rs73166824       rs73166826       rs73166827       rs73166846       rs73486328       rs73486333       rs73486336       rs74405504       rs74484855       rs74621786       rs74699146       rs74891238       rs75106576       rs75116312       rs75289579       rs75443449       rs75506671       rs75586234       rs75659511       rs75796663       rs75810820       rs75948748       rs76055951       rs76184307       rs76554265       rs76607064       rs76673474       rs77018604       rs77311602       rs77604987       rs77796675       rs77838420       rs78277161       rs78528817       rs78570356       rs78685855       rs78705928       rs78793844       rs78885213       rs78917932       rs79071547       rs79242303       rs79257154       rs79421079       rs79941323       rs80003501       rs80201841       rs80228274       rs80243607       rs111225941       rs111231945       rs111344752       rs111412981       rs111429378       rs111570182       rs111727229       rs111806318       rs111971104       rs111981074       rs112124499       rs112138498       rs112184728       rs112213208       rs112215505       rs112295435       rs112344470       rs112382270       rs112458926       rs112620637       rs112702542       rs112708921       rs112812874       rs112868258       rs113033846       rs113097985       rs113100223       rs113167382       rs113185511       rs113193253       rs113251755       rs113311457       rs113358481       rs113526075       rs113527181       rs113559481       rs113614811       rs113691535       rs113745702       rs113805462       rs114018430       rs114025980       rs114075566       rs114261999       rs114348715       rs114407037       rs114533168       rs114632805       rs114645226       rs114770282       rs114966664       rs114971933       rs114975787       rs115061538       rs115070351       rs115151331       rs115174495       rs115204440       rs115277004       rs115338858       rs115486532       rs115585045       rs115599522       rs115706419       rs115773241       rs115838322       rs116027733       rs116196563       rs116290657       rs116325923       rs116335998       rs116383641       rs116694079       rs116992563       rs117024940       rs117059787       rs117084405       rs117088111       rs117160424       rs117187231       rs117208803       rs117307771       rs117340324       rs117395751       rs117575374       rs117724376       rs117811376       rs117886458       rs118000178       rs118024843       rs118114967       rs138130726       rs138172498       rs138343241       rs138729489       rs138837804       rs139146278       rs139230974       rs139441969       rs139454259       rs139458645       rs139469072       rs139640932       rs139684989       rs139836376       rs139915363       rs140493169       rs140580354       rs140700119       rs141034891       rs141204621       rs141266109       rs141479297       rs141726608       rs141790751       rs141935834       rs141988325       rs142123620       rs142300330       rs142398742       rs142471520       rs142825697       rs142842792       rs142878895       rs143188460       rs143285408       rs143388195       rs143416725       rs143941649       rs144117189       rs144230229       rs144505095       rs144531354       rs145125605       rs145293262       rs145372527       rs145719959       rs145826054       rs145870023       rs145885274       rs145901999       rs146109344       rs146209232       rs146227472       rs146576718       rs146629778       rs146835791       rs146959090       rs146976709       rs147059195       rs147080942       rs147442816       rs147672698       rs147701945       rs147760803       rs147806712       rs148144236       rs148177836       rs148192819       rs148334263       rs148386175       rs148503268       rs148631185       rs148636642       rs148787681       rs148944321       rs149034291       rs149203651       rs149521295       rs149526515       rs149681141       rs149850904       rs149961603       rs150185509       rs150501003       rs150641965       rs150967718       rs150972317       rs151022832       rs151235842       rs180860746       rs181113605       rs181136564       rs181497977       rs181549382       rs181811425       rs181967114       rs182153673       rs182496294       rs183209681       rs183324377       rs183361341       rs183377754       rs183796351       rs184026614       rs185086669       rs185346345       rs185464760       rs185707197       rs185718848       rs185841749       rs186005443       rs186252491       rs186573807       rs186610846       rs186753921       rs186978189       rs187467845       rs187963491       rs188097176       rs188208420       rs188357103       rs188604396       rs188754908       rs188763457       rs188785242       rs189423051       rs189788910       rs189904239       rs190322914       rs190326666       rs190425862       rs190806889       rs191301594       rs191551041       rs191877303       rs191925575       rs192608613       rs192614605       rs193156772       rs193290605       rs199528726       rs199840809       rs199869045       rs199913384       rs200089445       rs200409792       rs200475101       rs200543020       rs200739438       rs200971052       rs201063833       rs201111638       rs201212951       rs201368307       rs201590713       rs201724771       rs201873771       rs201884209       rs202077963       rs202111630       rs202124566       rs202199950       rs367681516       rs367779072       rs367868853       rs367870024       rs368039369       rs368314745       rs368579029       rs368883972       rs369211101       rs369219176       rs369228763       rs369271769       rs369452926       rs369475668       rs369565545       rs369583695       rs369649977       rs369696076       rs369713570       rs369757893       rs369875518       rs369988175       rs370164089       rs370241695       rs370362542       rs370488881       rs370730159       rs370947501       rs371225655       rs371504074       rs372096629       rs372226303       rs372281039       rs372434133       rs372592181       rs372618312       rs372642214       rs372708251       rs372745215       rs372859078       rs372956669       rs373053293       rs373136416       rs373818892       rs373922403       rs373930462       rs373948704       rs373952650       rs373988610       rs374001967       rs374096089       rs374378324       rs374531225       rs374716980       rs374747859       rs374832108       rs374856561       rs375007584       rs375048132       rs375220597       rs375391464       rs375454272       rs375507622       rs375596382       rs375772548       rs376385695       rs376803371       rs376904402       rs376958309       rs377000630       rs377144604       rs377159394       rs377202435       rs377203593       rs377222678       rs377418653       rs377468742       rs377607554       rs527389554       rs527468105       rs527527813       rs527859782       rs527995611       rs528308145       rs528475184       rs528527918       rs528537595       rs528613354       rs528665884       rs528931304       rs528956376       rs529018190       rs529434073       rs529536464       rs529636547       rs529657548       rs529667487       rs529715113       rs529953521       rs530241250       rs530273492       rs530868116       rs530979105       rs531042158       rs531123841       rs531445104       rs531460814       rs531594132       rs532152199       rs532317056       rs532392026       rs532525842       rs532558349       rs532829802       rs532841032       rs532933368       rs533060370       rs533533636       rs533547051       rs533547250       rs533760625       rs533899832       rs534434340       rs534448119       rs534456563       rs534933408       rs535447854       rs535452804       rs535493010       rs535493094       rs535516026       rs535565114       rs535700131       rs535768798       rs535952868       rs536418984       rs536559879       rs536885714       rs536950835       rs537352912       rs537416431       rs537422325       rs537489033       rs537491248       rs537557027       rs537771772       rs538025989       rs538088664       rs538333837       rs538349252       rs538464127       rs538513514       rs538544992       rs538751359       rs538806768       rs539175631       rs539342816       rs539479540       rs539685360       rs539795635       rs539880471       rs540231436       rs540798216       rs540867265       rs540972773       rs540977857       rs541096695       rs541116941       rs541116995       rs541225139       rs541251918       rs541318620       rs541458237       rs541718176       rs541842736       rs541855394       rs542026494       rs542102956       rs542576104       rs542822756       rs543071890       rs543174377       rs543367472       rs543504014       rs543538238       rs543680202       rs543748706       rs543836463       rs543843068       rs543882988       rs543953217       rs544306604       rs544368103       rs544376030       rs544569479       rs544645601       rs544852668       rs544857203       rs545379713       rs545517338       rs545522475       rs545556638       rs545639174       rs545652544       rs545764538       rs545828223       rs546396379       rs546566884       rs546708271       rs546726996       rs546983211       rs547121928       rs547166048       rs547299548       rs547368585       rs547429239       rs547439233       rs547535357       rs547596580       rs547606189       rs547771352       rs548011501       rs548067698       rs548183987       rs548448238       rs548963983       rs549101156       rs549122487       rs549134201       rs549158371       rs549276984       rs549343135       rs549406119       rs549764391       rs549822550       rs549919347       rs549982581       rs550126619       rs550280202       rs550587244       rs550720030       rs550884726       rs551488522       rs551654323       rs551687560       rs551720242       rs551824581       rs551977887       rs551983886       rs552051884       rs552295396       rs552441934       rs552628344       rs552641297       rs552689814       rs552818903       rs552845969       rs552886899       rs552905264       rs553149055       rs553166090       rs553434348       rs553676121       rs553682176       rs553752228       rs553759573       rs553834839       rs553897926       rs553962102       rs554100061       rs554235410       rs554505487       rs554952022       rs554965043       rs555158543       rs555214329       rs555289842       rs555415142       rs555611665       rs555745300       rs555908859       rs556091342       rs556223893       rs556229918       rs556361088       rs556402852       rs556686041       rs557000041       rs557147012       rs557210436       rs557283587       rs557352703       rs557353631       rs557419965       rs558001219       rs558127681       rs558275282       rs558606830       rs558741256       rs559230315       rs559276409       rs559311459       rs559608490       rs559709295       rs559860210       rs559923888       rs560292880       rs560616488       rs560988413       rs561128540       rs561423433       rs561600420       rs561627613       rs561922942       rs561943388       rs562081949       rs562349243       rs562482948       rs562558456       rs562708705       rs562755544       rs562854522       rs563108804       rs563297228       rs563300282       rs563347752       rs563352051       rs563416349       rs563425588       rs563731263       rs563765419       rs563864887       rs564060691       rs564139829       rs564200867       rs564410578       rs564434352       rs564658549       rs564879580       rs564907312       rs565349099       rs565427880       rs565486980       rs565870792       rs565937622       rs565940560       rs566009487       rs566076000       rs566077670       rs566251285       rs566689737       rs566729459       rs566870308       rs566946100       rs567127784       rs567191902       rs567517924       rs567802715       rs568061032       rs568099353       rs568479656       rs568579950       rs568636861       rs568639111       rs568739992       rs568749229       rs568772867       rs569109416       rs569534747       rs569559906       rs569778806       rs569920280       rs570021713       rs570079313       rs570234554       rs570349493       rs570458963       rs570478248       rs570501232       rs570560235       rs570578444       rs570715318       rs570886580       rs571163137       rs571249960       rs571825812       rs571925406       rs572178114       rs572205294       rs572265250       rs572326374       rs572348180       rs572359083       rs572488596       rs572768287       rs572780555       rs572993269       rs572998003       rs573210040       rs573349898       rs573432265       rs573448880       rs573466460       rs573468465       rs573609084       rs573776471       rs573865239       rs573876053       rs573910441       rs573953019       rs574018431       rs574094035       rs574138596       rs574224451       rs574237171       rs574640792       rs575217706       rs575240672       rs575242019       rs575737519       rs575746904       rs575861918       rs576033992       rs576094441       rs576158048       rs576172043       rs576272832       rs576404866       rs576683180       rs576774990       rs576820700       rs576893099       rs576900040       rs577017996       rs577044559       rs577543295       rs577679276       rs577767770       rs577958455       rs578022594       rs578159927       rs745403205       rs745510775       rs745761751       rs745786838       rs745851728       rs745881486       rs746359384       rs746650973       rs747013104       rs747340728       rs747365699       rs747801449       rs747853052       rs748397959       rs748453321       rs748485879       rs748660683       rs749112518       rs749137827       rs749595129       rs750378784       rs750512479       rs750649859       rs750733230       rs750825017       rs750877406       rs750937650       rs751117896       rs751166061       rs751172933       rs751179165       rs751306047       rs751502543       rs751543910       rs751688056       rs751954230       rs752191040       rs752293702       rs753042056       rs753253267       rs753342966       rs753350743       rs753432944       rs754272246       rs754543354       rs755026599       rs755196287       rs755276731       rs755776902       rs756044022       rs756061035       rs756380760       rs756447048       rs756480646       rs756570791       rs756757790       rs756960507       rs757088254       rs757138619       rs757176460       rs757191334       rs757342854       rs757548654       rs757622831       rs757622908       rs757710977       rs758039703       rs758195258       rs758285463       rs758556190       rs758686830       rs758976739       rs759178834       rs759517558       rs759577338       rs759635565       rs759725470       rs759813815       rs759924077       rs759961128       rs760437476       rs760562670       rs760851759       rs761224382       rs761228375       rs761332329       rs761510323       rs761567448       rs761686142       rs761962521       rs762010381       rs762100367       rs762339507       rs762383807       rs762462932       rs762973348       rs763150700       rs763208947       rs763299280       rs763335985       rs763432318       rs763498778       rs763522555       rs763735503       rs764247836       rs764419528       rs764631268       rs764728169       rs764820390       rs765385086       rs765407960       rs765772586       rs765849905       rs766446474       rs766518475       rs766634499       rs766718113       rs766921104       rs767094056       rs767185601       rs767328001       rs767421707       rs767497820       rs767565284       rs767599495       rs767613502       rs767618128       rs767925937       rs768525336       rs768618569       rs768869656       rs769038046       rs769136204       rs769224342       rs769610764       rs769715288       rs769858779       rs770000778       rs770271108       rs770378040       rs770470953       rs770839659       rs770912107       rs770985158       rs771379482       rs771383942       rs772041860       rs772372545       rs772483806       rs772491052       rs772577694       rs772852295       rs773016379       rs773099025       rs773295572       rs773333821       rs773509078       rs773559848       rs773988316       rs774144284       rs774445089       rs774661105       rs774923941       rs775294848       rs775343501       rs775412981       rs775488875       rs775955452       rs776045523       rs776463679       rs776529423       rs776539204       rs776572060       rs776579027       rs776742606       rs776812776       rs776830625       rs777135599       rs777313868       rs777441142       rs777497482       rs777970324       rs778067320       rs778082333       rs778168391       rs778169495       rs778456882       rs778725692       rs778749445       rs778830756       rs779111398       rs779676241       rs779964669       rs780235115       rs780539565       rs780625232       rs780731886       rs781207265       rs781512680       rs781602758       rs781639649      

GALNT9基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向引物Tm值
反向引物序列
反向引物Tm值
rank
CAAGTATGAGGAGTACGGC
57
GATGTTTCCACTGTTGCTG
57
AAGTGGTACCTGGAGAACG
59
CTTTGCTGTTTCTCACCTCTC
59
CAAGTATGAGGAGTACGGC
57
ATCTGTCTGCACTTTCTGG
58
CCCAAGCCACAACTTAGAC
59
GGGTGAGTCTCCAAATGGT
59
CAGTGACAACGTGGAACTC
59
TGTTGCGGACAATCTTCAC
59
GACTCTGGATCTGTCCTGC
60
GTTGTTGTAGGGCTTCCTG
59
AAGTGGTACCTGGAGAACG
59
TTTGCTGTTTCTCACCTCTC
58
TACTTCGGAGACATTGGGC
60
CCTTCTGTTTCCCTCATGC
59
GATACATGGCTTAGAAGTGCAG
59
CATTGACGAAGATGAAGACCA
59
AAGTGGTACCTGGAGAACG
59
TTTGCTGTTTCTCACCTCTC
58
      尚未收录相关数据

GALNT9基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 溶酶体
  • 内涵体
  • 细胞核
  • 细胞质
  • 液泡
  • 细胞膜
  • 细胞外基质
  • 内质网
  • 线粒体
  • 高尔基体
  • 细胞骨架

GALNT9基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0000139
J3KNN1(UniProtKB)
IEA
GO:0006486
J3KNN1(UniProtKB)
IEA
GO:0016021
J3KNN1(UniProtKB)
IEA
GO:0016757
J3KNN1(UniProtKB)
IEA
GO:0030246
J3KNN1(UniProtKB)
IEA
GO:0000139
Q9HCQ5(UniProtKB)
TAS
GO:0004653
Q9HCQ5(UniProtKB)
NAS
GO:0004653
Q9HCQ5(UniProtKB)
TAS
GO:0006493
Q9HCQ5(UniProtKB)
NAS
GO:0016021
Q9HCQ5(UniProtKB)
IEA
GO:0016266
Q9HCQ5(UniProtKB)
TAS
GO:0030246
Q9HCQ5(UniProtKB)
IEA
GO:0046872
Q9HCQ5(UniProtKB)
IEA
基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称

可能调控GALNT9基因的相关microRNA:     


通路基因列表
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Neuroblastoma 0.000271442 1 0 BeFree
Central neuroblastoma 0.000271442 1 0 BeFree
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