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PMID: 9010136 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Molecular diversity and evolution of blaTEM genes encoding beta-lactamases resistant to clavulanic acid in clinical E. coli.

Journal of molecular evolution ·Vol. 44 ·No. 1 ·1997-01-00 ·Pages 57-65

Caniça MM, Lu CY, Krishnamoorthy R, Paul GC

Abstract

The molecular diversity of inhibitor-resistant TEM (IRT) enzymes was explored using a strategy which involved DNA amplification by polymerase chain reaction (PCR), analysis of restriction fragment length polymorphism (RFLP), and direct nucleotide sequencing. The study of plasmid-borne genes from 27 strains, resistant to amoxicillin and beta-lactamase-inhibitor combinations, identified mutations resulting in amino acid change at positions 69, 244, 275, and 276 known to be associated with the IRT phenotype and a mutation at nucleotide position 162 in the promoter region. These mutations were found to lie on two different gene sequences, described here as "TEM-1B like" and "TEM-2 like" restriction linkage groups. Further analysis, of nucleotide sequences of promoter and coding regions of the beta-lactamases, confirmed that a given mutation causing IRT phenotype could be associated with two different gene sequence frameworks and two different causal mutations could lie on identical gene sequence framework. These data argue in favor of convergent phenotypic evolution of IRT enzymes under the selective pressure imposed by the intensive clinical use of beta-lactam-beta-lactamase inhibitor combinations.

MeSH Terms
Amoxicillin/pharmacology Anti-Bacterial Agents/pharmacology Clavulanic Acid Clavulanic Acids/pharmacology Escherichia coli/drug effects,enzymology,genetics Evolution, Molecular Genes, Bacterial/genetics Genetic Variation/genetics Molecular Sequence Data Polymerase Chain Reaction/methods Polymorphism, Restriction Fragment Length Promoter Regions, Genetic/genetics Sequence Analysis, DNA beta-Lactam Resistance/genetics beta-Lactamases/genetics
Chemicals
Anti-Bacterial Agents Clavulanic Acids Clavulanic Acid Amoxicillin beta-Lactamases beta-lactamase TEM-1 beta-lactamase TEM-2
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Caniça M M
Laboratoire de Recherche en Microbiologie, UFR Cochin-Port-Royal, 24 rue du faubourg Saint-Jacques, 75014, Paris, France.
Lu C Y
Krishnamoorthy R
Paul G C
References (33)
33 references, click to expand
  1. Site-directed mutagenesis at the active site of Escherichia coli TEM-1 beta-lactamase. Suicide inhibitor-resistant mutants reveal the role of arginine 244 and methionine 69 in catalysis.
    J Biol Chem. 1992 Oct 15;267(29):20600-6 PMID: 1400382
  2. Clinical isolates of Escherichia coli producing TRI beta-lactamases: novel TEM-enzymes conferring resistance to beta-lactamase inhibitors.
    J Antimicrob Chemother. 1992 Oct;30(4):449-62 PMID: 1490918
  3. Characterization and amino acid sequence of IRT-4, a novel TEM-type enzyme with a decreased susceptibility to beta-lactamase inhibitors.
    FEMS Microbiol Lett. 1994 Jul 1;120(1-2):111-7 PMID: 8056282
  4. Rapid and efficient cosmid cloning.
    Nucleic Acids Res. 1981 Jul 10;9(13):2989-98 PMID: 6269067
  5. Small plasmids are involved in amoxicillin-clavulanate resistance in Escherichia coli.
    Antimicrob Agents Chemother. 1989 Apr;33(4):595 PMID: 2658797
  6. A functional classification scheme for beta-lactamases and its correlation with molecular structure.
    Antimicrob Agents Chemother. 1995 Jun;39(6):1211-33 PMID: 7574506
  7. Convergent evolution of TEM-26, a beta-lactamase with extended-spectrum activity.
    J Antimicrob Chemother. 1994 Apr;33(4):707-20 PMID: 8056689
  8. More extended-spectrum beta-lactamases.
    Antimicrob Agents Chemother. 1991 Sep;35(9):1697-704 PMID: 1952834
  9. Incidence and mechanisms of resistance to the combination of amoxicillin and clavulanic acid in Escherichia coli.
    Antimicrob Agents Chemother. 1995 Nov;39(11):2478-83 PMID: 8585729
  10. Mismatch PCR: a rapid method to screen for the Pro207-->Leu mutation in the lipoprotein lipase (LPL) gene.
    Hum Mol Genet. 1992 Oct;1(7):541 PMID: 1307255
  11. TRC-1: emergence of a clavulanic acid-resistant TEM beta-lactamase in a clinical strain.
    FEMS Microbiol Lett. 1992 Mar 1;70(2):113-7 PMID: 1316862
  12. Analytical isoelectric focusing of R factor-determined beta-lactamases: correlation with plasmid compatibility.
    J Bacteriol. 1976 Feb;125(2):713-8 PMID: 1107329
  13. OHIO-1 beta-lactamase resistant to mechanism-based inactivators.
    FEMS Microbiol Lett. 1992 Apr 1;71(1):79-82 PMID: 1320587
  14. Penicillinase synthesis controlled by infectious R factors in Enterobacteriaceae.
    Nature. 1965 Oct 16;208(5007):239-41 PMID: 5326330
  15. A standard numbering scheme for the class A beta-lactamases.
    Biochem J. 1991 May 15;276 ( Pt 1):269-70 PMID: 2039479
  16. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  17. The active-site-serine penicillin-recognizing enzymes as members of the Streptomyces R61 DD-peptidase family.
    Biochem J. 1988 Mar 1;250(2):313-24 PMID: 3128280
  18. Factors determining resistance to beta-lactam combined with beta-lactamase inhibitors in Escherichia coli.
    J Antimicrob Chemother. 1991 May;27(5):569-75 PMID: 1653204
  19. A computer program for choosing optimal oligonucleotides for filter hybridization, sequencing and in vitro amplification of DNA.
    Nucleic Acids Res. 1989 Nov 11;17(21):8543-51 PMID: 2587212
  20. Sequence of the genes blaT-1B and blaT-2.
    Gene. 1991 Jun 15;102(1):71-3 PMID: 1650734
  21. Compilation and analysis of Escherichia coli promoter DNA sequences.
    Nucleic Acids Res. 1983 Apr 25;11(8):2237-55 PMID: 6344016
  22. Emergence of clinical isolates of Escherichia coli producing TEM-1 derivatives or an OXA-1 beta-lactamase conferring resistance to beta-lactamase inhibitors.
    Antimicrob Agents Chemother. 1994 May;38(5):1085-9 PMID: 8067742
  23. The structure of beta-lactamases.
    Philos Trans R Soc Lond B Biol Sci. 1980 May 16;289(1036):321-31 PMID: 6109327
  24. First characterization of inhibitor-resistant TEM (IRT) beta-lactamases in Klebsiella pneumoniae strains.
    Antimicrob Agents Chemother. 1995 Nov;39(11):2580-2 PMID: 8585751
  25. Nucleotide sequences of the genes coding for the TEM-like beta-lactamases IRT-1 and IRT-2 (formerly called TRI-1 and TRI-2).
    FEMS Microbiol Lett. 1994 Jul 1;120(1-2):75-80 PMID: 8056297
  26. Nucleotide sequence of the ampicillin resistance gene of Escherichia coli plasmid pBR322.
    Proc Natl Acad Sci U S A. 1978 Aug;75(8):3737-41 PMID: 358200
  27. Survey of the prevalence of beta-lactamases amongst 1000 gram-negative bacilli isolated consecutively at the Royal London Hospital.
    J Antimicrob Chemother. 1992 Oct;30(4):429-47 PMID: 1490917
  28. Extended-spectrum and inhibitor-resistant TEM-type beta-lactamases: mutations, specificity, and three-dimensional structure.
    Antimicrob Agents Chemother. 1995 Dec;39(12):2593-601 PMID: 8592985
  29. beta-Lactamases and beta-lactam resistance in Escherichia coli.
    Antimicrob Agents Chemother. 1985 Nov;28(5):703-5 PMID: 3911882
  30. [Resistance to amoxicillin and amoxicillin-clavulanic acid combination of 231 clinical strains of Escherichia coli, isolated in 1992 at the Cochin Hospital].
    Pathol Biol (Paris). 1995 Nov;43(9):760-5 PMID: 8746097
  31. Characterization of a new TEM-type beta-lactamase resistant to clavulanate, sulbactam, and tazobactam in a clinical isolate of Escherichia coli.
    Antimicrob Agents Chemother. 1993 Oct;37(10):2059-63 PMID: 8257123
  32. Transposition of the gene encoding a TEM-12 extended-spectrum beta-lactamase.
    Antimicrob Agents Chemother. 1992 Sep;36(9):1981-6 PMID: 1329636
  33. Molecular characterization of nine different types of mutants among 107 inhibitor-resistant TEM beta-lactamases from clinical isolates of Escherichia coli.
    Antimicrob Agents Chemother. 1995 Feb;39(2):427-30 PMID: 7726509
Article Info
Journal
Journal of molecular evolution
Abbr.
J Mol Evol
ISSN
0022-2844
Published
1997-01-00
Pages
57-65
Language
English
Region
Germany
NLM ID
0360051
Subset
IM
Databases
GENBANK
X95401
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