Home LiteratureArticle Details
PMID: 8282687 Published · ppublish English Comparative Study Journal Article Research Support, U.S. Gov't, P.H.S.

In vivo selection of conditional-lethal mutations in the gene encoding elongation factor G of Escherichia coli.

Journal of bacteriology ·Vol. 176 ·No. 1 ·1994-01-00 ·Pages 123-9

Hou Y, Lin YP, Sharer JD, March PE

Abstract

The ribosome translocation step that occurs during protein synthesis is a highly conserved, essential activity of all cells. The precise movement of one codon that occurs following peptide bond formation is regulated by elongation factor G (EF-G) in eubacteria or elongation factor 2 (EF-2) in eukaryotes. To begin to understand molecular interactions that regulate this process, a genetic selection was developed with the aim of obtaining conditional-lethal alleles of the gene (fusA) that encodes EF-G in Escherichia coli. The genetic selection depends on the observation that resistant strains arose spontaneously in the presence of sublethal concentrations of the antibiotic kanamycin. Replica plating was performed to obtain mutant isolates from this collection that were restrictive for growth at 42 degrees C. Two tightly temperature-sensitive strains were characterized in detail and shown to harbor single-site missense mutations within fusA. The fusA100 mutant encoded a glycine-to-aspartic acid change at codon 502. The fusA101 allele encoded a glutamine-to-proline alteration at position 495. Induction kinetics of beta-galactosidase activity suggested that both mutations resulted in slower elongation rates in vivo. These missense mutations were very near a small group of conserved amino acid residues (positions 483 to 493) that occur in EF-G and EF-2 but not EF-Tu. It is concluded that these sequences encode a specific domain that is essential for efficient translocase function.

MeSH Terms
Alleles Amino Acid Sequence Cell Division Cloning, Molecular Enzyme Induction Escherichia coli/genetics,growth & development Genes, Bacterial/genetics Genes, Lethal/genetics Genetic Complementation Test Hot Temperature Kanamycin Resistance/genetics Molecular Sequence Data Mutation Peptide Elongation Factor G Peptide Elongation Factors/genetics Protein Biosynthesis/genetics Selection, Genetic Sequence Analysis, DNA beta-Galactosidase/biosynthesis
Chemicals
Peptide Elongation Factor G Peptide Elongation Factors beta-Galactosidase
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Hou Y
Department of Biochemistry, Robert Wood Johnson Medical School, University of Medicine and Dentistry of New Jersey, Piscataway 08854.
Lin Y P
Sharer J D
March P E
References (24)
24 references, click to expand
  1. Mutations in the gene for EF-G reduce the requirement for 4.5S RNA in the growth of E. coli.
    Cell. 1987 Jun 19;49(6):825-33 PMID: 2438050
  2. Amino acid sequence of mammalian elongation factor 2 deduced from the cDNA sequence: homology with GTP-binding proteins.
    Proc Natl Acad Sci U S A. 1986 Jul;83(14):4978-82 PMID: 3014523
  3. Interaction of elongation factors EF-G and EF-Tu with a conserved loop in 23S RNA.
    Nature. 1988 Jul 28;334(6180):362-4 PMID: 2455872
  4. Novel mutants of elongation factor G.
    J Mol Biol. 1990 Oct 20;215(4):549-57 PMID: 2231719
  5. The GTPase superfamily: a conserved switch for diverse cell functions.
    Nature. 1990 Nov 8;348(6297):125-32 PMID: 2122258
  6. A GTP-binding protein (Era) has an essential role in growth rate and cell cycle control in Escherichia coli.
    J Bacteriol. 1991 Apr;173(7):2265-70 PMID: 1901053
  7. 4.5S RNA: does form predict function?
    New Biol. 1991 May;3(5):430-8 PMID: 1715753
  8. Localization of the membrane binding sites of Era in Escherichia coli.
    Res Microbiol. 1991 Feb-Apr;142(2-3):301-7 PMID: 1925028
  9. Elongation factor Tu: a molecular switch in protein biosynthesis.
    Mol Microbiol. 1992 Mar;6(6):683-8 PMID: 1573997
  10. Early evolutionary relationships among known life forms inferred from elongation factor EF-2/EF-G sequences: phylogenetic coherence and structure of the archaeal domain.
    J Mol Evol. 1992 May;34(5):396-405 PMID: 1602493
  11. Membrane-associated GTPases in bacteria.
    Mol Microbiol. 1992 May;6(10):1253-7 PMID: 1640828
  12. Reconstitution of a GTPase activity by a 50S ribosomal protein and E. coli.
    Nat New Biol. 1971 Sep 8;233(36):62-3 PMID: 4329351
  13. Mutants of Escherichia coli blocked in protein synthesis: mutants with an altered G factor.
    Cold Spring Harb Symp Quant Biol. 1969;34:463-8 PMID: 4314912
  14. Association of fusidic acid sensitivity with G factor in a protein-synthesizing system.
    Biochem Biophys Res Commun. 1968 Dec 9;33(5):769-73 PMID: 4881331
  15. Requirement of an Escherichia coli 50 S ribosomal protein component for effective interaction of the ribosome with T and G factors and with guanosine triphosphate.
    J Biol Chem. 1972 Feb 10;247(3):805-14 PMID: 4333515
  16. Induction kinetics of the L-arabinose operon of Escherichia coli.
    J Bacteriol. 1973 Jul;115(1):9-14 PMID: 4577756
  17. Identification of two copies of the gene for the elongation factor EF-Tu in E. coli.
    Nature. 1975 Oct 9;257(5526):458-62 PMID: 1101072
  18. Inhibition of ribosomal translocation by aminoglycoside antibiotics.
    Biochem Biophys Res Commun. 1978 Aug 14;83(3):991-7 PMID: 361042
  19. Interaction of kanamycin and related antibiotics with the large subunit of ribosomes and the inhibition of translocation.
    Biochem Biophys Res Commun. 1978 Sep 29;84(2):358-65 PMID: 363127
  20. Chemical crosslinking of elongation factor G to the 23S RNA in 70S ribosomes from Escherichia coli.
    Nucleic Acids Res. 1983 Jul 25;11(14):4923-32 PMID: 6348702
  21. The nucleotide sequence of the Escherichia coli fus gene, coding for elongation factor G.
    Nucleic Acids Res. 1984 Feb 24;12(4):2181-92 PMID: 6322136
  22. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.
    Gene. 1985;33(1):103-19 PMID: 2985470
  23. Characterization of the lep operon of Escherichia coli. Identification of the promoter and the gene upstream of the signal peptidase I gene.
    J Biol Chem. 1985 Jun 25;260(12):7206-13 PMID: 2987248
  24. Interaction of antibiotics with functional sites in 16S ribosomal RNA.
    Nature. 1987 Jun 4-10;327(6121):389-94 PMID: 2953976
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1994-01-00
Pages
123-9
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC205022
Subset
IM
Grants
NIGMS NIH HHS · NIGMS GM-40087 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com