Home LiteratureArticle Details
PMID: 8230421 Published · ppublish English Comparative Study Journal Article Research Support, U.S. Gov't, P.H.S.

Eleven loci encoding trans-acting factors are required for transient complementation of human cytomegalovirus oriLyt-dependent DNA replication.

Journal of virology ·Vol. 67 ·No. 12 ·1993-12-00 ·Pages 6979-88

Pari GS, Anders DG

Abstract

Recently we described the use of human cytomegalovirus (HCMV) cosmid clones in a cotransfection assay of HCMV oriLyt replication (G. S. Pari, M. A. Kacica, and D. G. Anders, J. Virol. 67:2575-2582, 1993). We have now used this assay to identify 11 distinct required loci encoding trans-acting factors sufficient for transient complementation of oriLyt-dependent DNA replication. This set includes all of the virus genes essential to initiate and perform DNA synthesis together with the virus genes required to express these replication functions from their native promoters. Six of the identified loci span open reading frames (ORFs) that encode homologs or probable homologs of herpes simplex virus type 1 replication genes, consistent with predictions based on sequence similarities and biochemical properties. These include the DNA polymerase UL54 and polymerase-associated protein UL44, the single-stranded-DNA-binding protein UL57, and proposed subunits of a helicase-primase complex, UL70, UL105, and UL101-102. Frameshift mutations in any one of these essential ORFs abrogated complementation of DNA replication. Three required loci, UL36-38, IRS1 (or TRS1), and IE1/IE2, encode known regulatory proteins. The remaining two loci span ORFs UL84 and UL112-113 and encode early temporal class nucleus-associated proteins of unknown function. Neither of these genes have been implicated previously in DNA replication or in regulating gene expression, nor have counterparts in herpes simplex virus type 1 or Epstein-Barr virus been described. The results presented here will facilitate investigation of the mechanisms and regulation of HCMV lytic-phase DNA replication.

MeSH Terms
Cells, Cultured Cloning, Molecular Cosmids Cytomegalovirus/genetics,growth & development DNA Replication Genes, Viral Genetic Complementation Test Herpesviridae/genetics Humans Trans-Activators/genetics,metabolism Transfection Viral Regulatory and Accessory Proteins/genetics,metabolism
Chemicals
Trans-Activators Viral Regulatory and Accessory Proteins
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Pari G S
Laboratory of Virology, Wadsworth Center for Laboratories and Research, Albany, New York.
Anders D G
References (60)
60 references, click to expand
  1. Human cytomegalovirus. III. Virus-induced DNA polymerase.
    J Virol. 1975 Aug;16(2):298-310 PMID: 168404
  2. Genomic localization, sequence analysis, and transcription of the putative human cytomegalovirus DNA polymerase gene.
    J Virol. 1987 Jan;61(1):119-24 PMID: 3023689
  3. Structural and nonstructural proteins of strain Colburn cytomegalovirus.
    Virology. 1981 Jun;111(2):516-37 PMID: 6264671
  4. Use of recombinant plasmids to investigate the structure of the human cytomegalovirus genome.
    J Gen Virol. 1982 Mar;59(Pt 1):111-29 PMID: 6279770
  5. Sequence and transcription analysis of the human cytomegalovirus DNA polymerase gene.
    J Virol. 1987 Jan;61(1):125-33 PMID: 3023690
  6. A method for identifying the viral genes required for herpesvirus DNA replication.
    Proc Natl Acad Sci U S A. 1986 Dec;83(23):9094-8 PMID: 3024166
  7. A cytomegalovirus protein with properties of herpes simplex virus ICP8: partial purification of the polypeptide and map position of the gene.
    J Virol. 1987 Oct;61(10):3143-51 PMID: 3041036
  8. High-efficiency transformation of mammalian cells by plasmid DNA.
    Mol Cell Biol. 1987 Aug;7(8):2745-52 PMID: 3670292
  9. Four phosphoproteins with common amino termini are encoded by human cytomegalovirus AD169.
    J Virol. 1988 Jan;62(1):331-40 PMID: 2824853
  10. Immunological characterization of an early cytomegalovirus single-strand DNA-binding protein with similarities to the HSV major DNA-binding protein.
    Virology. 1987 Dec;161(2):579-88 PMID: 2825423
  11. Identification of herpes simplex virus type 1 genes required for origin-dependent DNA synthesis.
    J Virol. 1988 Feb;62(2):435-43 PMID: 2826806
  12. Transcriptional elements as components of eukaryotic origins of DNA replication.
    Cell. 1988 Mar 11;52(5):635-8 PMID: 3278812
  13. Location, transcript analysis, and partial nucleotide sequence of the cytomegalovirus gene encoding an early DNA-binding protein with similarities to ICP8 of herpes simplex virus type 1.
    J Virol. 1988 Apr;62(4):1364-72 PMID: 2831398
  14. The complete DNA sequence of the long unique region in the genome of herpes simplex virus type 1.
    J Gen Virol. 1988 Jul;69 ( Pt 7):1531-74 PMID: 2839594
  15. Identification of sequence requirements and trans-acting functions necessary for regulated expression of a human cytomegalovirus early gene.
    J Virol. 1988 Sep;62(9):3463-73 PMID: 2841497
  16. Identification and characterization of oriLyt, a lytic origin of DNA replication of Epstein-Barr virus.
    Cell. 1988 Nov 4;55(3):427-33 PMID: 2846181
  17. Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer.
    Proc Natl Acad Sci U S A. 1988 Dec;85(23):8998-9002 PMID: 2461560
  18. Herpes simplex virus 1 helicase-primase: a complex of three herpes-encoded gene products.
    Proc Natl Acad Sci U S A. 1989 Apr;86(7):2186-9 PMID: 2538835
  19. Epstein-Barr virus BZLF1 trans-activator specifically binds to a consensus AP-1 site and is related to c-fos.
    EMBO J. 1989 Jan;8(1):127-32 PMID: 2540954
  20. Responsiveness of the Epstein-Barr virus NotI repeat promoter to the Z transactivator is mediated in a cell-type-specific manner by two independent signal regions.
    J Virol. 1989 Jul;63(7):3040-50 PMID: 2542612
  21. Posttranscriptional regulation of a class of human cytomegalovirus phosphoproteins encoded by an early transcription unit.
    J Virol. 1989 Jul;63(7):3117-27 PMID: 2542619
  22. Overexpression and assembly of the herpes simplex virus type 1 helicase-primase in insect cells.
    J Biol Chem. 1989 Dec 15;264(35):20835-8 PMID: 2556383
  23. The zta transactivator involved in induction of lytic cycle gene expression in Epstein-Barr virus-infected lymphocytes binds to both AP-1 and ZRE sites in target promoter and enhancer regions.
    J Virol. 1990 Mar;64(3):1143-55 PMID: 2154599
  24. Promoter-specific trans activation and repression by human cytomegalovirus immediate-early proteins involves common and unique protein domains.
    J Virol. 1990 Apr;64(4):1556-65 PMID: 2157043
  25. Analysis of the protein-coding content of the sequence of human cytomegalovirus strain AD169.
    Curr Top Microbiol Immunol. 1990;154:125-69 PMID: 2161319
  26. Herpes simplex virus helicase-primase: the UL8 protein is not required for DNA-dependent ATPase and DNA helicase activities.
    Nucleic Acids Res. 1990 Jun 25;18(12):3573-8 PMID: 2163521
  27. Nucleotide sequence of a cytomegalovirus single-stranded DNA-binding protein gene: comparison with alpha- and gammaherpesvirus counterparts reveals conserved segments.
    J Gen Virol. 1990 Oct;71 ( Pt 10):2451-6 PMID: 2172458
  28. Identification of the lytic origin of DNA replication in human cytomegalovirus by a novel approach utilizing ganciclovir-induced chain termination.
    J Virol. 1990 Dec;64(12):6184-95 PMID: 2173786
  29. Multicomponent origin of cytomegalovirus lytic-phase DNA replication.
    J Virol. 1991 Feb;65(2):931-7 PMID: 1846206
  30. Association of DNA helicase and primase activities with a subassembly of the herpes simplex virus 1 helicase-primase composed of the UL5 and UL52 gene products.
    Proc Natl Acad Sci U S A. 1991 Feb 15;88(4):1105-9 PMID: 1847509
  31. Herpes simplex virus-1 helicase-primase. Physical and catalytic properties.
    J Biol Chem. 1991 Mar 5;266(7):4484-8 PMID: 1847923
  32. Elements in the transcriptional regulatory region flanking herpes simplex virus type 1 oriS stimulate origin function.
    J Virol. 1991 May;65(5):2601-11 PMID: 1850034
  33. Sequence of the HindIII T fragment of human cytomegalovirus, which encodes a DNA helicase.
    J Gen Virol. 1991 May;72 ( Pt 5):1113-21 PMID: 1851811
  34. High level expression of DNA polymerases from herpesviruses.
    J Gen Virol. 1991 Jul;72 ( Pt 7):1729-34 PMID: 1649906
  35. Eukaryotic DNA polymerases.
    Annu Rev Biochem. 1991;60:513-52 PMID: 1883203
  36. The six conserved helicase motifs of the UL5 gene product, a component of the herpes simplex virus type 1 helicase-primase, are essential for its function.
    J Virol. 1992 Jan;66(1):469-79 PMID: 1309257
  37. Transactivation of the cytomegalovirus ICP36 gene promoter requires the alpha gene product TRS1 in addition to IE1 and IE2.
    J Virol. 1992 Feb;66(2):1050-8 PMID: 1370547
  38. Characterization of human cytomegalovirus UL84 early gene and identification of its putative protein product.
    J Virol. 1992 Feb;66(2):1098-108 PMID: 1309892
  39. Boundaries and structure of human cytomegalovirus oriLyt, a complex origin for lytic-phase DNA replication.
    J Virol. 1992 Jun;66(6):3373-84 PMID: 1316454
  40. Physical and functional interaction of human cytomegalovirus DNA polymerase and its accessory protein (ICP36) expressed in insect cells.
    J Virol. 1992 Jul;66(7):4126-33 PMID: 1318399
  41. Human cytomegalovirus origin of DNA replication (oriLyt) resides within a highly complex repetitive region.
    Proc Natl Acad Sci U S A. 1992 Jun 15;89(12):5246-50 PMID: 1319057
  42. The UL8 subunit of the herpes simplex virus helicase-primase complex is required for efficient primer utilization.
    J Virol. 1992 Aug;66(8):4884-92 PMID: 1321275
  43. trans-acting requirements for replication of Epstein-Barr virus ori-Lyt.
    J Virol. 1992 Aug;66(8):5030-9 PMID: 1321285
  44. Primary structure of the herpesvirus saimiri genome.
    J Virol. 1992 Aug;66(8):5047-58 PMID: 1321287
  45. Origins of DNA replication in metazoan chromosomes.
    J Biol Chem. 1993 Jan 5;268(1):1-4 PMID: 8416916
  46. A point mutation in the human cytomegalovirus DNA polymerase gene confers resistance to ganciclovir and phosphonylmethoxyalkyl derivatives.
    Antimicrob Agents Chemother. 1993 Jan;37(1):19-25 PMID: 8381637
  47. Open reading frames UL44, IRS1/TRS1, and UL36-38 are required for transient complementation of human cytomegalovirus oriLyt-dependent DNA synthesis.
    J Virol. 1993 May;67(5):2575-82 PMID: 8386266
  48. An immortalized human fibroblast cell line is permissive for human cytomegalovirus infection.
    J Virol. 1993 Jun;67(6):3644-8 PMID: 8388516
  49. The lytic origin of herpesvirus papio is highly homologous to Epstein-Barr virus ori-Lyt: evolutionary conservation of transcriptional activation and replication signals.
    J Virol. 1993 Jul;67(7):4006-16 PMID: 8389916
  50. cis-acting elements in the lytic origin of DNA replication of Epstein-Barr virus.
    J Virol. 1993 Jul;67(7):4237-45 PMID: 8389925
  51. The acidic transcriptional activation domains of VP16 and p53 bind the cellular replication protein A and stimulate in vitro BPV-1 DNA replication.
    Cell. 1993 Jun 18;73(6):1207-21 PMID: 8390328
  52. The transactivator proteins VP16 and GAL4 bind replication factor A.
    Cell. 1993 Jun 18;73(6):1223-32 PMID: 8513504
  53. Cloning of the complete human cytomegalovirus genome in cosmids.
    Gene. 1982 Apr;18(1):39-46 PMID: 6286417
  54. Recognition of protein coding regions in DNA sequences.
    Nucleic Acids Res. 1982 Sep 11;10(17):5303-18 PMID: 7145702
  55. Replicative forms of human cytomegalovirus DNA with joined termini are found in permissively infected human cells but not in non-permissive Balb/c-3T3 mouse cells.
    J Gen Virol. 1983 Feb;64 (Pt 2):373-89 PMID: 6300290
  56. A comprehensive set of sequence analysis programs for the VAX.
    Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):387-95 PMID: 6546423
  57. DNA sequence and expression of the B95-8 Epstein-Barr virus genome.
    Nature. 1984 Jul 19-25;310(5974):207-11 PMID: 6087149
  58. Identification and characterization of a major early cytomegalovirus DNA-binding protein.
    J Virol. 1986 May;58(2):253-62 PMID: 3009843
  59. The complete DNA sequence of varicella-zoster virus.
    J Gen Virol. 1986 Sep;67 ( Pt 9):1759-816 PMID: 3018124
  60. Human cytomegalovirus. IV. Specific inhibition of virus-induced DNA polymerase activity and viral DNA replication by phosphonoacetic acid.
    J Virol. 1975 Dec;16(6):1560-5 PMID: 172657
Article Info
Journal
Journal of virology
Abbr.
J Virol
ISSN
0022-538X
Published
1993-12-00
Pages
6979-88
Language
English
Region
United States
NLM ID
0113724
PMCID
PMC238157
Subset
IM
Grants
NIAID NIH HHS · AI31249 · United States
NIAID NIH HHS · AI33416 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com