Home LiteratureArticle Details
PMID: 8196653 Published · ppublish English Comparative Study Journal Article

Functional substitution of an essential yeast RNA polymerase subunit by a highly conserved mammalian counterpart.

Molecular and cellular biology ·Vol. 14 ·No. 6 ·1994-06-00 ·Pages 4155-9

McKune K, Woychik NA

Abstract

We isolated the cDNA encoding the homolog of the Saccharomyces cerevisiae nuclear RNA polymerase common subunit RPB6 from hamster CHO cells. Alignment of yeast RPB6 with its mammalian counterpart revealed that the subunits have nearly identical carboxy-terminal halves and a short acidic region at the amino terminus. Remarkably, the length and amino acid sequence of the hamster RPB6 are identical to those of the human RPB6 subunit. The conservation in sequence from lower to higher eukaryotes also reflects conservation of function in vivo, since hamster RPB6 supports normal wild-type yeast cell growth in the absence of the essential gene encoding RPB6.

MeSH Terms
Amino Acid Sequence Animals Base Sequence CHO Cells Cell Nucleus/enzymology Conserved Sequence Cricetinae DNA, Complementary/isolation & purification,metabolism DNA-Directed RNA Polymerases/biosynthesis,chemistry,isolation & purification Humans Macromolecular Substances Mammals Molecular Sequence Data RNA Polymerase II/biosynthesis,chemistry,isolation & purification Recombinant Fusion Proteins/biosynthesis,chemistry,isolation & purification Restriction Mapping Saccharomyces cerevisiae/enzymology Sequence Homology, Amino Acid
Chemicals
DNA, Complementary Macromolecular Substances Recombinant Fusion Proteins RNA Polymerase II DNA-Directed RNA Polymerases
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
McKune K
Roche Institute of Molecular Biology, Nutley, New Jersey 07110.
Woychik N A
References (36)
36 references, click to expand
  1. 5-Fluoroorotic acid as a selective agent in yeast molecular genetics.
    Methods Enzymol. 1987;154:164-75 PMID: 3323810
  2. Prokaryotic and eukaryotic RNA polymerases have homologous core subunits.
    Proc Natl Acad Sci U S A. 1987 Mar;84(5):1192-6 PMID: 3547406
  3. A yeast activity can substitute for the HeLa cell TATA box factor.
    Nature. 1988 Jul 7;334(6177):77-80 PMID: 3290688
  4. Site-directed mutagenesis by overlap extension using the polymerase chain reaction.
    Gene. 1989 Apr 15;77(1):51-9 PMID: 2744487
  5. Isolation and molecular characterization of a cDNA encoding the 23-kDa subunit of human RNA polymerase II.
    J Biol Chem. 1989 Aug 5;264(22):13114-21 PMID: 2753903
  6. RNA polymerase II subunit RPB4 is essential for high- and low-temperature yeast cell growth.
    Mol Cell Biol. 1989 Jul;9(7):2854-9 PMID: 2674672
  7. RNA polymerase II subunit RPB3 is an essential component of the mRNA transcription apparatus.
    Mol Cell Biol. 1989 Dec;9(12):5387-94 PMID: 2685562
  8. Purification of eukaryotic RNA polymerase II by immunoaffinity chromatography. Elution of active enzyme with protein stabilizing agents from a polyol-responsive monoclonal antibody.
    J Biol Chem. 1990 Apr 25;265(12):7069-77 PMID: 2324114
  9. RNA polymerase II subunit composition, stoichiometry, and phosphorylation.
    Mol Cell Biol. 1990 May;10(5):1915-20 PMID: 2183013
  10. Subunits shared by eukaryotic nuclear RNA polymerases.
    Genes Dev. 1990 Mar;4(3):313-23 PMID: 2186966
  11. The amino acid sequence of the human RNA polymerase II 33-kDa subunit hRPB 33 is highly conserved among eukaryotes.
    J Biol Chem. 1990 May 25;265(15):8400-3 PMID: 2187864
  12. Resolution of factors required for the initiation of transcription by yeast RNA polymerase II.
    J Biol Chem. 1990 Jul 5;265(19):11105-7 PMID: 2193032
  13. Functional domains and upstream activation properties of cloned human TATA binding protein.
    Science. 1990 Jun 29;248(4963):1625-30 PMID: 2363050
  14. A rapid method for the construction of synthetic genes using the polymerase chain reaction.
    Biotechniques. 1990 Sep;9(3):298, 300 PMID: 2223068
  15. Epitope tagging and protein surveillance.
    Methods Enzymol. 1991;194:508-19 PMID: 1706460
  16. A highly conserved domain of TFIID displays species specificity in vivo.
    Cell. 1991 Apr 19;65(2):333-40 PMID: 2015627
  17. Functional differences between yeast and human TFIID are localized to the highly conserved region.
    Cell. 1991 Apr 19;65(2):341-8 PMID: 2015628
  18. Complementary DNA sequencing: expressed sequence tags and human genome project.
    Science. 1991 Jun 21;252(5013):1651-6 PMID: 2047873
  19. RNA polymerase II.
    Annu Rev Biochem. 1991;60:689-715 PMID: 1883205
  20. Yeast RNA polymerase II subunit RPB9 is essential for growth at temperature extremes.
    J Biol Chem. 1991 Oct 5;266(28):19053-5 PMID: 1918023
  21. Yeast and human TFIIDs are interchangeable for the response to acidic transcriptional activators in vitro.
    Genes Dev. 1992 Feb;6(2):296-303 PMID: 1310667
  22. The TATA-binding protein and associated factors are integral components of the RNA polymerase I transcription factor, SL1.
    Cell. 1992 Mar 6;68(5):965-76 PMID: 1547496
  23. Characterization of a 7-kilodalton subunit of vaccinia virus DNA-dependent RNA polymerase with structural similarities to the smallest subunit of eukaryotic RNA polymerase II.
    J Virol. 1992 May;66(5):3003-10 PMID: 1560534
  24. RPC10 encodes a new mini subunit shared by yeast nuclear RNA polymerases.
    Gene Expr. 1992;2(1):31-7 PMID: 1617300
  25. RPB7, one of two dissociable subunits of yeast RNA polymerase II, is essential for cell viability.
    Yeast. 1993 Mar;9(3):295-9 PMID: 8488730
  26. RNA polymerase II subunit RPB10 is essential for yeast cell viability.
    J Biol Chem. 1993 Jun 5;268(16):12230 PMID: 8505344
  27. Yeast RNA polymerase II subunit RPB11 is related to a subunit shared by RNA polymerase I and III.
    Gene Expr. 1993;3(1):77-82 PMID: 8508029
  28. Structure of the gene encoding the 14.5 kDa subunit of human RNA polymerase II.
    Nucleic Acids Res. 1993 Nov 25;21(23):5345-50 PMID: 8265347
  29. The presence of phosphorylated subunits in yeast RNA polymerases A and B.
    FEBS Lett. 1976 Nov 15;72(1):37-41 PMID: 791686
  30. Phosphorylation of yeast DNA-dependent RNA polymerases in vivo and in vitro. Isolation of enzymes and identification of phosphorylated subunits.
    J Biol Chem. 1977 May 10;252(9):3082-91 PMID: 323261
  31. Establishing homologies in protein sequences.
    Methods Enzymol. 1983;91:524-45 PMID: 6855599
  32. One-step gene disruption in yeast.
    Methods Enzymol. 1983;101:202-11 PMID: 6310324
  33. Extensive homology among the largest subunits of eukaryotic and prokaryotic RNA polymerases.
    Cell. 1985 Sep;42(2):599-610 PMID: 3896517
  34. The gene encoding the large subunit of human RNA polymerase II.
    J Biol Chem. 1985 Dec 5;260(28):15204-10 PMID: 2999107
  35. Characterization of RNA polymerase type II from human term placenta.
    J Cell Physiol. 1986 Jun;127(3):432-8 PMID: 3754875
  36. Function of a yeast TATA element-binding protein in a mammalian transcription system.
    Nature. 1988 Jul 7;334(6177):37-42 PMID: 3290687
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1994-06-00
Pages
4155-9
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC358781
Subset
IM
Databases
GENBANK
S69934
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com