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PMID: 8157004 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Correction of xeroderma pigmentosum repair defect by basal transcription factor BTF2 (TFIIH).

The EMBO journal ·Vol. 13 ·No. 7 ·1994-04-01 ·Pages 1645-53

van Vuuren AJ, Vermeulen W, Ma L, Weeda G, Appeldoorn E, Jaspers NG, van der Eb AJ, Bootsma D, Hoeijmakers JH, Humbert S

Abstract

ERCC3 was initially identified as a gene correcting the nucleotide excision repair (NER) defect of xeroderma pigmentosum complementation group B (XP-B). The recent finding that its gene product is identical to the p89 subunit of basal transcription factor BTF2(TFIIH), opened the possibility that it is not directly involved in NER but that it regulates the transcription of one or more NER genes. Using an in vivo microinjection repair assay and an in vitro NER system based on cell-free extracts we demonstrate that ERCC3 in BTF2 is directly implicated in excision repair. Antibody depletion experiments support the idea that the p62 BTF2 subunit and perhaps the entire transcription factor function in NER. Microinjection experiments suggest that exogenous ERCC3 can exchange with ERCC3 subunits in the complex. Expression of a dominant negative K436-->R ERCC3 mutant, expected to have lost all helicase activity, completely abrogates NER and transcription and concomitantly induces a dramatic chromatin collapse. These findings establish the role of ERCC3 and probably the entire BTF2 complex in transcription in vivo which was hitherto only demonstrated in vitro. The results strongly suggest that transcription itself is a critical component for maintenance of chromatin structure. The remarkable dual role of ERCC3 in NER and transcription provides a clue in understanding the complex clinical features of some inherited repair syndromes.

MeSH Terms
Animals DNA Repair DNA-Binding Proteins/metabolism Drosophila Proteins Humans Microinjections Transcription Factor TFIIH Transcription Factors/metabolism Transcription Factors, TFII Transcription, Genetic Xeroderma Pigmentosum/genetics,ultrastructure
Chemicals
DNA-Binding Proteins Drosophila Proteins Transcription Factors Transcription Factors, TFII Transcription Factor TFIIH hay protein, Drosophila
Authors & Affiliations
10 authors, click to expand affiliations / ORCID
van Vuuren A J
Department of Cell Biology and Genetics, Erasmus University, The Netherlands.
Vermeulen W
Ma L
Weeda G
Appeldoorn E
Jaspers N G
van der Eb A J
Bootsma D
Hoeijmakers J H
Humbert S
References (56)
56 references, click to expand
  1. Phosphorylation of C-terminal domain of RNA polymerase II is not required in basal transcription.
    Nature. 1993 May 27;363(6427):371-4 PMID: 8497323
  2. Human nucleotide excision nuclease removes thymine dimers from DNA by incising the 22nd phosphodiester bond 5' and the 6th phosphodiester bond 3' to the photodimer.
    Proc Natl Acad Sci U S A. 1992 Apr 15;89(8):3664-8 PMID: 1314396
  3. SSL2, a suppressor of a stem-loop mutation in the HIS4 leader encodes the yeast homolog of human ERCC-3.
    Cell. 1992 Jun 12;69(6):1031-42 PMID: 1318786
  4. Specific complex formation between proteins encoded by the yeast DNA repair and recombination genes RAD1 and RAD10.
    Proc Natl Acad Sci U S A. 1992 Sep 1;89(17):8273-7 PMID: 1518857
  5. Discrete mutations introduced in the predicted nucleotide-binding sites of the mdr1 gene abolish its ability to confer multidrug resistance.
    Mol Cell Biol. 1989 Dec;9(12):5289-97 PMID: 2573836
  6. Human general transcription factor IIH phosphorylates the C-terminal domain of RNA polymerase II.
    Nature. 1992 Aug 20;358(6388):641-5 PMID: 1495560
  7. Regulation of RNA polymerase II transcription.
    Curr Opin Cell Biol. 1993 Jun;5(3):469-76 PMID: 8352965
  8. Identical defects in DNA repair in xeroderma pigmentosum group G and rodent ERCC group 5.
    Nature. 1993 May 13;363(6425):185-8 PMID: 8483505
  9. In vitro transcription: whole-cell extract.
    Methods Enzymol. 1983;101:568-82 PMID: 6193397
  10. Effect of exogenous DNA fragments on human cell extract-mediated DNA repair synthesis.
    Mutat Res. 1991 May;254(3):217-24 PMID: 2052011
  11. 2-Acetylaminofluorene-modified probes for the indirect hybridocytochemical detection of specific nucleic acid sequences.
    Exp Cell Res. 1984 Jul;153(1):61-72 PMID: 6203769
  12. Cockayne syndrome: review of 140 cases.
    Am J Med Genet. 1992 Jan 1;42(1):68-84 PMID: 1308368
  13. Complementation of the DNA repair defect in xeroderma pigmentosum group G cells by a human cDNA related to yeast RAD2.
    Nature. 1993 May 13;363(6425):182-5 PMID: 8483504
  14. Rapid and efficient site-specific mutagenesis without phenotypic selection.
    Methods Enzymol. 1987;154:367-82 PMID: 3323813
  15. Myelin deficient mice: expression of myelin basic protein and generation of mice with varying levels of myelin.
    Cell. 1987 Feb 27;48(4):713-21 PMID: 2434243
  16. Nucleotide excision repair I: from E. coli to yeast.
    Trends Genet. 1993 May;9(5):173-7 PMID: 8337754
  17. DNA repair helicase: a component of BTF2 (TFIIH) basic transcription factor.
    Science. 1993 Apr 2;260(5104):58-63 PMID: 8465201
  18. DNA repair. Engagement with transcription.
    Nature. 1993 May 13;363(6425):114-5 PMID: 8483493
  19. Nucleotide excision repair.
    Photochem Photobiol. 1993 May;57(5):905-21 PMID: 8393197
  20. Simplicity amidst complexity in transcriptional initiation.
    Bioessays. 1993 Aug;15(8):559-60 PMID: 8135770
  21. Stranded in an active gene.
    Curr Biol. 1993 Jan;3(1):67-9 PMID: 15335889
  22. Xeroderma pigmentosum complementation group H falls into complementation group D.
    Mutat Res. 1991 Sep;255(2):201-8 PMID: 1922152
  23. A presumed DNA helicase encoded by ERCC-3 is involved in the human repair disorders xeroderma pigmentosum and Cockayne's syndrome.
    Cell. 1990 Aug 24;62(4):777-91 PMID: 2167179
  24. MRI of a very rare hereditary ectodermal dysplasia: PIBI(D)S.
    Neuroradiology. 1992;34(4):316-7 PMID: 1528442
  25. A role for the human single-stranded DNA binding protein HSSB/RPA in an early stage of nucleotide excision repair.
    Nucleic Acids Res. 1992 Aug 11;20(15):3873-80 PMID: 1508673
  26. Purification of PCNA as a nucleotide excision repair protein.
    Nucleic Acids Res. 1992 Jul 11;20(13):2441-6 PMID: 1352873
  27. A new nucleotide-excision-repair gene associated with the disorder trichothiodystrophy.
    Am J Hum Genet. 1993 Oct;53(4):817-21 PMID: 8213812
  28. Nucleotide excision repair, a tracking mechanism in search of damage.
    J Biol Chem. 1993 Aug 15;268(23):16871-4 PMID: 8349576
  29. The complexities of eukaryotic transcription initiation: regulation of preinitiation complex assembly.
    Trends Biochem Sci. 1991 Nov;16(11):402-8 PMID: 1776168
  30. Xeroderma pigmentosum complementation group G associated with Cockayne syndrome.
    Am J Hum Genet. 1993 Jul;53(1):185-92 PMID: 8317483
  31. Eukaryotic coactivators associated with the TATA box binding protein.
    Curr Opin Genet Dev. 1992 Apr;2(2):236-42 PMID: 1638117
  32. Xeroderma pigmentosum (complementation group D) mutation is present in patients affected by trichothiodystrophy with photosensitivity.
    Hum Genet. 1986 Oct;74(2):107-12 PMID: 3770739
  33. Microinjection of human cell extracts corrects xeroderma pigmentosum defect.
    EMBO J. 1983;2(5):637-41 PMID: 6357782
  34. Purification and characterization of yeast RNA polymerase II transcription factor b.
    J Biol Chem. 1991 Oct 5;266(28):19000-5 PMID: 1918015
  35. RNA polymerase B (II) and general transcription factors.
    Annu Rev Biochem. 1990;59:711-54 PMID: 2197989
  36. Stable and specific association between the yeast recombination and DNA repair proteins RAD1 and RAD10 in vitro.
    Mol Cell Biol. 1992 Jul;12(7):3041-9 PMID: 1620114
  37. Complementation of the xeroderma pigmentosum DNA repair defect in cell-free extracts.
    Cell. 1988 Apr 8;53(1):97-106 PMID: 3349527
  38. An RNA polymerase II transcription factor has an associated DNA-dependent ATPase (dATPase) activity strongly stimulated by the TATA region of promoters.
    Proc Natl Acad Sci U S A. 1989 Oct;86(19):7356-60 PMID: 2552440
  39. Mutation of lysine-48 to arginine in the yeast RAD3 protein abolishes its ATPase and DNA helicase activities but not the ability to bind ATP.
    EMBO J. 1988 Oct;7(10):3263-9 PMID: 2846277
  40. Mechanism of adenylate kinase. Are the essential lysines essential?
    Biochemistry. 1990 May 8;29(18):4296-304 PMID: 2161682
  41. RAD25 (SSL2), the yeast homolog of the human xeroderma pigmentosum group B DNA repair gene, is essential for viability.
    Proc Natl Acad Sci U S A. 1992 Dec 1;89(23):11416-20 PMID: 1333609
  42. Multifunctional RNA polymerase II initiation factor delta from rat liver. Relationship between carboxyl-terminal domain kinase, ATPase, and DNA helicase activities.
    J Biol Chem. 1993 Aug 15;268(23):17300-8 PMID: 8394338
  43. A Drosophila model for xeroderma pigmentosum and Cockayne's syndrome: haywire encodes the fly homolog of ERCC3, a human excision repair gene.
    Cell. 1992 Dec 11;71(6):925-37 PMID: 1458540
  44. Structurally and catalytically important residues in the phosphate binding loop of adenylate kinase of Escherichia coli.
    Biochemistry. 1990 Aug 14;29(32):7451-9 PMID: 2223776
  45. The genetic defect in Cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA.
    Proc Natl Acad Sci U S A. 1990 Jun;87(12):4707-11 PMID: 2352945
  46. Co-correction of the ERCC1, ERCC4 and xeroderma pigmentosum group F DNA repair defects in vitro.
    EMBO J. 1993 Sep;12(9):3685-92 PMID: 8253090
  47. Cloning of the 62-kilodalton component of basic transcription factor BTF2.
    Science. 1992 Sep 4;257(5075):1392-5 PMID: 1529339
  48. Proliferating cell nuclear antigen is required for DNA excision repair.
    Cell. 1992 Apr 17;69(2):367-74 PMID: 1348971
  49. RAD10, an excision repair gene of Saccharomyces cerevisiae, is involved in the RAD1 pathway of mitotic recombination.
    Mol Cell Biol. 1990 Jun;10(6):2485-91 PMID: 2188090
  50. Clinical heterogeneity within xeroderma pigmentosum associated with mutations in the DNA repair and transcription gene ERCC3.
    Am J Hum Genet. 1994 Feb;54(2):191-200 PMID: 8304337
  51. Factors involved in specific transcription by mammalian RNA polymerase II. Identification and characterization of factor IIH.
    J Biol Chem. 1992 Feb 5;267(4):2786-93 PMID: 1733973
  52. Nucleotide excision repair. II: From yeast to mammals.
    Trends Genet. 1993 Jun;9(6):211-7 PMID: 8337762
  53. Xeroderma pigmentosum-Cockayne syndrome complex in two patients: absence of skin tumors despite severe deficiency of DNA excision repair.
    J Am Acad Dermatol. 1993 Nov;29(5 Pt 2):883-9 PMID: 8408834
  54. Evidence for a repair enzyme complex involving ERCC1 and complementing activities of ERCC4, ERCC11 and xeroderma pigmentosum group F.
    EMBO J. 1993 Sep;12(9):3693-701 PMID: 8253091
  55. Nucleotide sequence, transcript mapping, and regulation of the RAD2 gene of Saccharomyces cerevisiae.
    J Bacteriol. 1986 Jun;166(3):914-23 PMID: 3011752
  56. Purification and interaction properties of the human RNA polymerase B(II) general transcription factor BTF2.
    J Biol Chem. 1991 Nov 5;266(31):20940-5 PMID: 1939143
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
1994-04-01
Pages
1645-53
Language
English
Region
England
NLM ID
8208664
PMCID
PMC394995
Subset
IM
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