Home LiteratureArticle Details
PMID: 8065323 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Proteins binding to 5' untranslated region sites: a general mechanism for translational regulation of mRNAs in human and yeast cells.

Molecular and cellular biology ·Vol. 14 ·No. 9 ·1994-09-00 ·Pages 5898-909

Stripecke R, Oliveira CC, McCarthy JE, Hentze MW

Abstract

We demonstrate that a bacteriophage protein and a spliceosomal protein can be converted into eukaryotic translational repressor proteins. mRNAs with binding sites for the bacteriophage MS2 coat protein or the spliceosomal human U1A protein were expressed in human HeLa cells and yeast. The presence of the appropriate binding protein resulted in specific, dose-dependent translational repression when the binding sites were located in the 5' untranslated region (UTR) of the reporter mRNAs. Neither mRNA export from the nucleus to the cytoplasm nor mRNA stability was demonstrably affected by the binding proteins. The data thus reveal a general mechanism for translational regulation: formation of mRNA-protein complexes in the 5' UTR controls translation initiation by steric blockage of a sensitive step in the initiation pathway. Moreover, the findings establish the basis for novel strategies to study RNA-protein interactions in vivo and to clone RNA-binding proteins.

MeSH Terms
Base Sequence Biological Transport Cell Nucleus/metabolism Cytoplasm/metabolism Gene Expression Regulation Gene Expression Regulation, Fungal HeLa Cells Humans Molecular Sequence Data Oligodeoxyribonucleotides/chemistry Protein Biosynthesis RNA, Messenger/metabolism RNA-Binding Proteins/genetics Repressor Proteins/genetics Saccharomyces cerevisiae
Chemicals
Oligodeoxyribonucleotides RNA, Messenger RNA-Binding Proteins Repressor Proteins
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Stripecke R
Gene Expression Programme, European Molecular Biology Laboratory, Heidelberg, Germany.
Oliveira C C
McCarthy J E
Hentze M W
References (53)
53 references, click to expand
  1. A new technique for the assay of infectivity of human adenovirus 5 DNA.
    Virology. 1973 Apr;52(2):456-67 PMID: 4705382
  2. Translation of 15-lipoxygenase mRNA is inhibited by a protein that binds to a repeated sequence in the 3' untranslated region.
    EMBO J. 1994 Mar 15;13(6):1476-81 PMID: 8137829
  3. Studies on a nonpolysomal ribonucleoprotein coding for myosin heavy chains from chick embryonic muscles.
    J Biol Chem. 1976 Dec 10;251(23):7600-9 PMID: 1002700
  4. Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information.
    Nucleic Acids Res. 1981 Jan 10;9(1):133-48 PMID: 6163133
  5. Sequence-specific interaction of R17 coat protein with its ribonucleic acid binding site.
    Biochemistry. 1983 May 24;22(11):2601-10 PMID: 6347247
  6. Insertion mutagenesis to increase secondary structure within the 5' noncoding region of a eukaryotic mRNA reduces translational efficiency.
    Cell. 1985 Mar;40(3):515-26 PMID: 2982496
  7. Influences of mRNA secondary structure on initiation by eukaryotic ribosomes.
    Proc Natl Acad Sci U S A. 1986 May;83(9):2850-4 PMID: 3458245
  8. Cloning, characterization, expression, and chromosomal localization of a human ferritin heavy-chain gene.
    Proc Natl Acad Sci U S A. 1986 Oct;83(19):7226-30 PMID: 3020541
  9. At least six nucleotides preceding the AUG initiator codon enhance translation in mammalian cells.
    J Mol Biol. 1987 Aug 20;196(4):947-50 PMID: 3681984
  10. Identification of the iron-responsive element for the translational regulation of human ferritin mRNA.
    Science. 1987 Dec 11;238(4833):1570-3 PMID: 3685996
  11. An RNA mutation that increases the affinity of an RNA-protein interaction.
    Nucleic Acids Res. 1987 Dec 23;15(24):10483-93 PMID: 3697094
  12. cDNA cloning of the human U1 snRNA-associated A protein: extensive homology between U1 and U2 snRNP-specific proteins.
    EMBO J. 1987 Dec 1;6(12):3841-8 PMID: 2962859
  13. A versatile in vivo and in vitro eukaryotic expression vector for protein engineering.
    Nucleic Acids Res. 1988 Jan 11;16(1):369 PMID: 3340539
  14. Each of the activities of signal recognition particle (SRP) is contained within a distinct domain: analysis of biochemical mutants of SRP.
    Cell. 1988 Jan 15;52(1):39-49 PMID: 2830980
  15. Cytoplasmic protein binds in vitro to a highly conserved sequence in the 5' untranslated region of ferritin heavy- and light-subunit mRNAs.
    Proc Natl Acad Sci U S A. 1988 Apr;85(7):2171-5 PMID: 3127826
  16. Iron-responsive elements: regulatory RNA sequences that control mRNA levels and translation.
    Science. 1988 May 13;240(4854):924-8 PMID: 2452485
  17. A movable and regulable inactivation function within the steroid binding domain of the glucocorticoid receptor.
    Cell. 1988 Sep 23;54(7):1073-80 PMID: 2843290
  18. Posttranscriptional regulatory mechanisms in Escherichia coli.
    Annu Rev Biochem. 1988;57:199-233 PMID: 3052271
  19. Purification of a specific repressor of ferritin mRNA translation from rabbit liver.
    J Biol Chem. 1989 Aug 15;264(23):13765-9 PMID: 2569464
  20. Identification of the RNA binding segment of human U1 A protein and definition of its binding site on U1 snRNA.
    EMBO J. 1989 Dec 20;8(13):4163-70 PMID: 2531658
  21. Preparation of precursors to mRNA from mammalian cell nuclei.
    Methods Enzymol. 1989;180:69-82 PMID: 2693911
  22. Translational repression by bacteriophage MS2 coat protein expressed from a plasmid. A system for genetic analysis of a protein-RNA interaction.
    J Biol Chem. 1990 Apr 5;265(10):5684-9 PMID: 2108146
  23. Translational control of prokaryotic gene expression.
    Trends Genet. 1990 Mar;6(3):78-85 PMID: 2183416
  24. Involvement of an initiation factor and protein phosphorylation in translational control of GCN4 mRNA.
    Trends Biochem Sci. 1990 Apr;15(4):148-52 PMID: 2187295
  25. High-efficiency yeast expression vectors based on the promoter of the phosphoglycerate kinase gene.
    Methods Enzymol. 1990;185:329-41 PMID: 2199785
  26. Translational repression by a complex between the iron-responsive element of ferritin mRNA and its specific cytoplasmic binding protein is position-dependent in vivo.
    EMBO J. 1990 Dec;9(12):4127-33 PMID: 1701143
  27. A conserved element in the leader mediates post-meiotic translation as well as cytoplasmic polyadenylation of a Drosophila spermatocyte mRNA.
    EMBO J. 1990 Dec;9(13):4519-25 PMID: 2124974
  28. Specific interaction between RNA phage coat proteins and RNA.
    Prog Nucleic Acid Res Mol Biol. 1991;40:185-220 PMID: 2031083
  29. Analysis of in vitro binding of U1-A protein mutants to U1 snRNA.
    Nucleic Acids Res. 1991 Sep 11;19(17):4611-8 PMID: 1832492
  30. Position is the critical determinant for function of iron-responsive elements as translational regulators.
    Mol Cell Biol. 1992 May;12(5):1959-66 PMID: 1569933
  31. Control of translational repression by protein-protein interactions.
    Nucleic Acids Res. 1992 Apr 11;20(7):1649-55 PMID: 1579455
  32. Intracellular distribution of the U1A protein depends on active transport and nuclear binding to U1 snRNA.
    J Cell Biol. 1992 Jul;118(1):11-21 PMID: 1618898
  33. Mechanism and regulation of eukaryotic protein synthesis.
    Microbiol Rev. 1992 Jun;56(2):291-315 PMID: 1620067
  34. Interaction of N-terminal domain of U1A protein with an RNA stem/loop.
    Nucleic Acids Res. 1992 Aug 25;20(16):4283-90 PMID: 1508720
  35. Domains of the Escherichia coli threonyl-tRNA synthetase translational operator and their relation to threonine tRNA isoacceptors.
    J Mol Biol. 1992 Oct 5;227(3):621-34 PMID: 1383551
  36. Bacteriophage and spliceosomal proteins function as position-dependent cis/trans repressors of mRNA translation in vitro.
    Nucleic Acids Res. 1992 Nov 11;20(21):5555-64 PMID: 1454520
  37. Identification of an RNA binding site for human thymidylate synthase.
    Proc Natl Acad Sci U S A. 1993 Jan 15;90(2):517-21 PMID: 8421684
  38. Regulating the fate of mRNA: the control of cellular iron metabolism.
    Cell. 1993 Jan 15;72(1):19-28 PMID: 8380757
  39. Inhibition of translational initiation in the yeast Saccharomyces cerevisiae as a function of the stability and position of hairpin structures in the mRNA leader.
    J Biol Chem. 1993 Mar 25;268(9):6453-62 PMID: 8454618
  40. The human U1 snRNP-specific U1A protein inhibits polyadenylation of its own pre-mRNA.
    Cell. 1993 Mar 26;72(6):881-92 PMID: 8458082
  41. Translational regulation by mRNA/protein interactions in eukaryotic cells: ferritin and beyond.
    Bioessays. 1993 Feb;15(2):85-90 PMID: 8471060
  42. Ribosomal protein S15 from Escherichia coli modulates its own translation by trapping the ribosome on the mRNA initiation loading site.
    Proc Natl Acad Sci U S A. 1993 May 15;90(10):4394-8 PMID: 7685101
  43. Allosteric mechanism for translational repression in the Escherichia coli alpha operon.
    Proc Natl Acad Sci U S A. 1993 May 15;90(10):4399-403 PMID: 7685102
  44. Cytoplasmic regulation of mRNA function: the importance of the 3' untranslated region.
    Cell. 1993 Jul 16;74(1):9-14 PMID: 7687524
  45. Messenger RNA degradation in eukaryotes.
    Cell. 1993 Aug 13;74(3):413-21 PMID: 7688664
  46. Ribosomal protein L32 of Saccharomyces cerevisiae regulates both splicing and translation of its own transcript.
    J Biol Chem. 1993 Sep 15;268(26):19669-74 PMID: 8366109
  47. Inhibition of translational initiation in Saccharomyces cerevisiae by secondary structure: the roles of the stability and position of stem-loops in the mRNA leader.
    Mol Microbiol. 1993 Aug;9(3):521-32 PMID: 8412699
  48. RNA recognition by the human immunodeficiency virus Tat and Rev proteins.
    Trends Biochem Sci. 1993 Jul;18(7):255-9 PMID: 8212135
  49. A complex secondary structure in U1A pre-mRNA that binds two molecules of U1A protein is required for regulation of polyadenylation.
    EMBO J. 1993 Dec 15;12(13):5191-200 PMID: 8262062
  50. Translational repression by the human iron-regulatory factor (IRF) in Saccharomyces cerevisiae.
    Nucleic Acids Res. 1993 Nov 25;21(23):5316-22 PMID: 8265343
  51. Recombinant iron-regulatory factor functions as an iron-responsive-element-binding protein, a translational repressor and an aconitase. A functional assay for translational repression and direct demonstration of the iron switch.
    Eur J Biochem. 1993 Dec 1;218(2):657-67 PMID: 8269957
  52. Localized RNAs and their functions.
    Bioessays. 1993 Oct;15(10):651-8 PMID: 7506023
  53. Cell-free translation of maternal messenger RNA from sea urchin eggs.
    Proc Natl Acad Sci U S A. 1973 Sep;70(9):2614-8 PMID: 4582192
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1994-09-00
Pages
5898-909
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC359116
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com