Home LiteratureArticle Details
PMID: 781621 Published · ppublish English Journal Article

The involvement of the anticodon adjacent modified nucleoside N-(9-(BETA-D-ribofuranosyl) purine-6-ylcarbamoyl)-threonine in the biological function of E. coli tRNAile.

Nucleic acids research ·Vol. 3 ·No. 5 ·1976-05-00 ·Pages 1185-201

Miller JP, Hussain Z, Schweizer MP

Abstract

tRNAile was isolated from E. coli Cp 79 (leu-, arg-, thr-, his-, thiamin-, RCrel) which had been grown on a sub-optimal concentration of thr and was found to contain an average of 50% less N-[9-(beta-D-ribofuranosyl)- purin-6-ylcarbamoyl]threonine, t6Ado, than tRNAile from cells grown on an optimum concentration of thr and containing a normal complement of t6Ado. The two tRNA's were identical in their ability to be aminoacylated, to accept the 3'-terminal dinucleotide, and to form an ile-tRNAile-Tu-GTP complex. In contrast, the t6Ado-deficient-tRNA was significantly less efficient in binding to ribosomes compared to the normal tRNA. This difference was seen in the binding of deacylated tRNA and in the nonenzymatic and enzymatic binding of ile-tRNA, all in response to poly AUC. The t6Ado-deficient ile-tRNA demonstrated no binding at Mg2+ concentrations less than or equal to 10 mM, while the normal ile-tRNA bound at low Mg2+ concentrations. Tetracycline had the same effect on the normal as on the t6Ado-deficient ile-tRNA binding. As a control, the binding of phe-tRNA (which does not contain t6Ado) from normal and thr-starved cells in response to poly U was identical. It was concluded that t6Ado is required for proper codon-anticodon interaction.

MeSH Terms
Amino Acyl-tRNA Synthetases/metabolism Anticodon Escherichia coli/drug effects,metabolism Isoleucine Kinetics Magnesium/pharmacology Nucleotidyltransferases/metabolism RNA, Transfer/metabolism RNA, Viral/metabolism Ribonucleosides/analysis Ribosomes/drug effects,metabolism Tetracycline/pharmacology Threonine/analysis
Chemicals
Anticodon RNA, Viral Ribonucleosides Isoleucine Threonine RNA, Transfer Nucleotidyltransferases Amino Acyl-tRNA Synthetases Tetracycline Magnesium
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Miller J P
Hussain Z
Schweizer M P
References (41)
41 references, click to expand
  1. Interaction of fragmented and cross-linked Escherichia coli valine transfer ribonucleic acid with T u factor-guanosine triphosphate complex.
    J Biol Chem. 1972 Feb 10;247(3):842-50 PMID: 4550763
  2. Determination of N-(9-( -D-ribofuranosyl)purin-6-ylcarbamoly)threonine at the picomole level in transfer-RNA.
    Anal Biochem. 1972 Dec;50(2):327-36 PMID: 4345787
  3. Identification and mutational relocation of the AUG codon initiating translation of iso-1-cytochrome c in yeast.
    J Biol Chem. 1971 Dec 25;246(24):7429-45 PMID: 5135310
  4. Some helical interactions of poly(N6-(delta 2-isopentenyl)adenylic acid).
    Biochemistry. 1974 Jan 29;13(3):535-42 PMID: 4810065
  5. The presence of N-(purin-6-ylcarbamoyl)threonine in transfer ribonucleic acid species whose codons begin with adenine.
    J Biol Chem. 1972 Oct 25;247(20):6394-401 PMID: 4561935
  6. Synthesis and conformational properties of diribonucleoside monophosphates containing modified nucleosides as found in transfer RNA.
    Biochim Biophys Acta. 1971 Mar 11;232(2):217-26 PMID: 5553678
  7. Chemical modification of the fluorescent base in phenylalanine transfer ribonucleic acid.
    Biochemistry. 1971 Jul 20;10(15):2969-76 PMID: 5000398
  8. A simple one-step method for the preparation of highly purified formylmethionine transfer ribonucleic acid and methionine transfer ribonucleic acid from Escherichia coli.
    Biochemistry. 1969 Jul;8(7):3024-8 PMID: 4897209
  9. Effect of the RC gene product on constitutive enzyme synthesis.
    J Mol Biol. 1971 Oct 14;61(1):271-3 PMID: 4947694
  10. The enzymatic synthesis of N-(purin-6-ylcarbamoyl)threonine, an anticodon-adjacent base in transfer ribonucleic acid.
    Biochemistry. 1974 Oct 22;13(22):4622-8 PMID: 4609459
  11. Acylation of transfer ribonucleic acid with the N-hydroxysuccinimide ester of phenoxyacetic acid.
    Biochemistry. 1972 Aug 29;11(18):3435-43 PMID: 4560265
  12. Nucleotide sequence of isoleucine transfer RNA from Torulopsis utilis.
    J Biochem. 1969 Mar;65(3):489-91 PMID: 5815243
  13. A convenient procedure for preparing transfer ribonucleic acid from Escherichia coli.
    Biochim Biophys Acta. 1969 Apr 22;179(2):297-307 PMID: 4890595
  14. Aminoacyl nucleosides. VI. Isolation and preliminary characterization of threonyladenine derivatives from transfer ribonucleic acid.
    Biochemistry. 1969 Aug;8(8):3278-82 PMID: 4897333
  15. Two additional reversed-phase chromatographic systems for the separation of transfer ribonucleic acids and their application to the preparation of two formylmethionine and a valine transfer ribonucleic acid from Escherichia coli B.
    Biochemistry. 1968 Oct;7(10):3479-87 PMID: 4878698
  16. Role of modified nucleoside adjacent to 3'-end of anticodon in codon-anticodon interaction.
    Biochem Biophys Res Commun. 1970 Jul 13;40(1):135-43 PMID: 5456949
  17. The isolation and characterization of N-[9-(beta-D-ribofuranosyl)-purin-6-ylcarbamoyl]glycine from yeast transfer RNA.
    Biochem Biophys Res Commun. 1970 Sep 10;40(5):1046-52 PMID: 5503779
  18. RNA CODEWORDS AND PROTEIN SYNTHESIS. THE EFFECT OF TRINUCLEOTIDES UPON THE BINDING OF SRNA TO RIBOSOMES.
    Science. 1964 Sep 25;145(3639):1399-407 PMID: 14172630
  19. Biosynthesis of N-(purin-6-ylcarbamoyl)-L-threonine riboside. Incorporation of L-threonine in vivo into modified nucleoside of transfer ribonucleic acid.
    Biochem J. 1972 Apr;127(3):515-9 PMID: 4561775
  20. The sequence of phenylalanine tRNA from E. coli.
    FEBS Lett. 1969 Jun;3(4):275-278 PMID: 11947028
  21. Codon-anticodon interaction of methionine specific tRNAs.
    Biochem Biophys Res Commun. 1972 Mar 24;46(6):2100-6 PMID: 4553156
  22. The presence of N-[9-(c-D-ribofuranosyl)purin-6-ylcarbamoyl] threonine in isoleucine, threonine and asparagine tRNAs from Escherichia coli.
    FEBS Lett. 1972 Mar;21(1):71-74 PMID: 11946478
  23. N-(purin-6-ylcarbamoyl)threonine: biosynthesis in vitro in transfer RNA by an enzyme purified from Escherichia coli.
    FEBS Lett. 1974 Mar 1;39(3):301-6 PMID: 4604806
  24. Iodine modification of E. coli tRNA Phe : reversible modification of 2-methylthio-N 6 -isopentenyladenosine and lack of disulfide formation.
    Biochim Biophys Acta. 1971 May 27;238(3):464-74 PMID: 5565894
  25. Studies on the role of factor Ts in polypeptide synthesis.
    Arch Biochem Biophys. 1970 Mar;137(1):262-9 PMID: 4907806
  26. 3-(3-Amino-3-carboxypropyl)uridine: a novel modified nucleoside isolated from Escherichia coli phenylalanine transfer ribonucleic acid.
    Biochemistry. 1974 Jun 4;13(12):2620-5 PMID: 4598734
  27. Transfer ribonucleic acid nucleotidyltransferase from Escherichia coli. II. Purification, physical properties, and substrate specificity.
    J Biol Chem. 1971 Mar 10;246(5):1274-9 PMID: 5545070
  28. Nucleotide sequence of N-formyl-methionyl-transfer RNA.
    Nature. 1968 Apr 20;218(5138):232-3 PMID: 4869713
  29. Inactivation of the Tu-GTP recognition site in aminoacyl-tRNA by chemical modification of the tRNA.
    Biochem Biophys Res Commun. 1970 Oct 9;41(1):190-8 PMID: 4318853
  30. Conformation and possible role of hypermodified nucleosides adjacent to 3'-end of anticodon in tRNA: N-(purin-6-ylcarbamoyl)-L-threonine riboside.
    Biochem Biophys Res Commun. 1974 Sep 9;60(1):211-8 PMID: 4423161
  31. Selective modification of yeast seryl-t-RNA and its effect on the acceptance and binding functions.
    Biochem Biophys Res Commun. 1966 Nov 22;25(4):441-6 PMID: 5965243
  32. Role modifications in tyrosine transfer RNA: a modified base affecting ribosome binding.
    J Mol Biol. 1969 Jan 14;39(1):145-57 PMID: 4938812
  33. A simple method for isolating highly purified yeast phenylalanine transfer ribonucleic acid.
    Biochemistry. 1968 Jul;7(7):2623-8 PMID: 4298225
  34. Action of venom phosphodiesterase on transfer RNA from Escherichia coli.
    Biochim Biophys Acta. 1970 Sep 17;217(1):176-88 PMID: 4323577
  35. Aminoacyl nucleosides. VII. N-(Purin-6-ylcarbamoyl)threonine. A new component of transfer ribonucleic acid.
    Biochemistry. 1969 Aug;8(8):3283-9 PMID: 4897334
  36. The sequence of nucleotides in tRNA Ile from E. coli B.
    Biochem Biophys Res Commun. 1971 May 21;43(4):729-34 PMID: 4935283
  37. A specific modification next to the anticodon of phenylalanine transfer ribonucleic acid.
    Eur J Biochem. 1968 Sep 24;5(4):546-55 PMID: 5698615
  38. Binding of transfer ribonucleic acid to ribosomes. Comparison of the nonenzymatic binding of aminoacylated and deacylated transfer ribonucleic acid.
    J Biol Chem. 1970 Feb 25;245(4):859-68 PMID: 4906638
  39. Proton magnetic resonance studies on the conformation of the hexanucleotide, GmpApApYpApsiP, and Related fragments from the anticodong loop of baker's yeast phenylalanine transfer ribonucleic acid.
    Biochemistry. 1975 Jul 15;14(14):3278-91 PMID: 1096939
  40. The binding of complementary oligoribonucleotides to yeast initiator Transfer RNA.
    Biochemistry. 1975 Jul 29;14(15):3310-4 PMID: 1096940
  41. Purification of transfer-RNA-nucleotidyltransferase from E. coli B.
    Biochem Biophys Res Commun. 1970 Mar 27;38(6):1174-9 PMID: 4245146
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1976-05-00
Pages
1185-201
Language
English
Region
England
NLM ID
0411011
PMCID
PMC342979
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com