Abstract
By comparing nucleic acid sequences determined for one of the most variable areas of 23S rRNA genes of 23 Campylobacter strains, we were able to identify regions specific for thermophilic Campylobacter strains. Oligonucleotide primers corresponding to these unique regions were synthesized and used in the polymerase chain reaction. One primer pair selectively detected all thermophilic Campylobacter species, while four other primer pairs allowed discrimination among the thermophilic species Campylobacter coli, Campylobacter jejuni subsp. jejuni, Campylobacter lari, and Campylobacter upsaliensis. All primer sets were tested successfully on a large number of clinical isolates.
MeSH Terms
Base Sequence
Campylobacter/classification,genetics,isolation & purification
Campylobacter coli/genetics
Campylobacter jejuni/genetics
DNA Primers/genetics
DNA, Bacterial/genetics
Evaluation Studies as Topic
Humans
Molecular Sequence Data
Polymerase Chain Reaction/methods,statistics & numerical data
RNA, Bacterial/genetics
RNA, Ribosomal, 23S/genetics
Sensitivity and Specificity
Species Specificity
Chemicals
DNA Primers
DNA, Bacterial
RNA, Bacterial
RNA, Ribosomal, 23S
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Eyers M
Department Biochemie, Universiteit Antewerpen, UIA, Belgium.
Chapelle S
Van Camp G
Goossens H
De Wachter R
References (19)
19 references, click to expand
-
Comparison of six media, including a semisolid agar, for the isolation of various Campylobacter species from stool specimens.
J Clin Microbiol. 1991 May;29(5):1007-10
PMID: 2056033
-
Bidirectional solid-phase sequencing of in vitro-amplified plasmid DNA.
Biotechniques. 1991 Jan;10(1):84-93
PMID: 2003929
-
Genome maps of Campylobacter jejuni and Campylobacter coli.
J Bacteriol. 1992 Apr;174(7):2332-7
PMID: 1313002
-
Identification of Chlamydia pneumoniae by DNA amplification of the 16S rRNA gene.
J Clin Microbiol. 1992 Apr;30(4):796-800
PMID: 1374077
-
Compilation of small ribosomal subunit RNA sequences.
Nucleic Acids Res. 1992 May 11;20 Suppl:2075-89
PMID: 1375995
-
Specific detection of Campylobacter jejuni and Campylobacter coli by using polymerase chain reaction.
J Clin Microbiol. 1992 Oct;30(10):2613-9
PMID: 1400961
-
Benchmarking--a conversation with Robert C. Camp. The source. Interview by Joe Flower.
Healthc Forum J. 1993 Jan-Feb;36(1):30-6
PMID: 10122946
-
Rapid and sensitive detection of Campylobacter spp. in chicken products by using the polymerase chain reaction.
Appl Environ Microbiol. 1992 Dec;58(12):3804-8
PMID: 1282312
-
Amplification and sequencing of variable regions in bacterial 23S ribosomal RNA genes with conserved primer sequences.
Curr Microbiol. 1993 Sep;27(3):147-51
PMID: 7691306
-
Use of the polymerase chain reaction for the specific and direct detection of Clostridium difficile in human feces.
Rev Infect Dis. 1991 Nov-Dec;13(6):1053-60
PMID: 1775837
-
Prevalence and characterization of hippurate-negative Campylobacter jejuni in King County, Washington.
J Clin Microbiol. 1987 Sep;25(9):1747-52
PMID: 3654945
-
Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction.
Methods Enzymol. 1987;155:335-50
PMID: 3431465
-
Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase.
Science. 1988 Jan 29;239(4839):487-91
PMID: 2448875
-
The genus Campylobacter: a decade of progress.
Clin Microbiol Rev. 1988 Apr;1(2):157-72
PMID: 3069194
-
Isolation and characterization of catalase-negative and catalase-weak strains of Campylobacter species, including "Campylobacter upsaliensis," from humans with gastroenteritis.
J Clin Microbiol. 1989 Sep;27(9):2042-5
PMID: 2778067
-
The 23S ribosomal RNA higher-order structure of Pseudomonas cepacia and other prokaryotes.
Eur J Biochem. 1989 Nov 6;185(2):355-64
PMID: 2583187
-
Is "Campylobacter upsaliensis" an unrecognised cause of human diarrhoea?
Lancet. 1990 Mar 10;335(8689):584-6
PMID: 1968583
-
Characterization and description of "Campylobacter upsaliensis" isolated from human feces.
J Clin Microbiol. 1990 May;28(5):1039-46
PMID: 2351720
-
Revision of Campylobacter, Helicobacter, and Wolinella taxonomy: emendation of generic descriptions and proposal of Arcobacter gen. nov.
Int J Syst Bacteriol. 1991 Jan;41(1):88-103
PMID: 1704793