Home LiteratureArticle Details
PMID: 6941271 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

The nucleotide sequence surrounding the replication terminus of R6K.

Bastia D, Germino J, Crosa JH, Ram J

Abstract

The replication terminus of the plasmid R6K has been cloned into the single-stranded DNA phage vector M13mp5 and also into the plasmid vectors pBR313 and PBR322. By using single-stranded DNA templates prepared from the recombinant DNA clones, the sequence of 215 base pairs of DNA containing the replication terminus has been determined. The DNA sequence of the region of the terminus does not contain any 2-fold rotational symmetry. Therefore, folding of the DNA at the region of the terminus is unlikely to be a cause for replication termination. Interaction of a host-specified protein(s) with the sequence of the replication terminus is probably the basis of the mechanism of replicaion termination.

MeSH Terms
Bacterial Proteins/metabolism Bacteriophages/genetics Base Sequence Carrier Proteins/metabolism Cloning, Molecular DNA/metabolism DNA Replication DNA, Bacterial/genetics DNA-Binding Proteins Nucleic Acid Conformation Plasmids
Chemicals
Bacterial Proteins Carrier Proteins DNA, Bacterial DNA-Binding Proteins DNA
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Bastia D
Germino J
Crosa J H
Ram J
References (22)
22 references, click to expand
  1. Construction and characterization of new cloning vehicles. I. Ampicillin-resistant derivatives of the plasmid pMB9.
    Gene. 1977;2(2):75-93 PMID: 344136
  2. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  3. DNA sequence from the histidine operon control region: seven histidine codons in a row.
    Proc Natl Acad Sci U S A. 1978 Sep;75(9):4281-5 PMID: 360216
  4. Determination of restriction sites and the nucleotide sequence surrounding the relaxation site of ColE1.
    J Mol Biol. 1978 Oct 5;124(4):601-39 PMID: 712849
  5. The use of exonuclease III for preparing single stranded DNA for use as a template in the chain terminator sequencing method.
    Nucleic Acids Res. 1979 Mar;6(3):831-48 PMID: 440973
  6. Enzymatic breakage and joining of deoxyribonucleic acid. VI. Further purification and properties of polynucleotide ligase from Escherichia coli infected with bacteriophage T4.
    J Biol Chem. 1968 Sep 10;243(17):4543-55 PMID: 4879167
  7. Circular R-factor molecules controlling penicillinase synthesis, replicating in Escherichia coli under either relaxed or stringent control.
    J Bacteriol. 1970 Oct;104(1):34-44 PMID: 4919751
  8. Gene 6 exonuclease of bacteriophage T7. I. Purification and properties of the enzyme.
    J Biol Chem. 1972 Jan 10;247(1):305-10 PMID: 4336366
  9. Non-specific termination of simian virus 40 DNA replication.
    J Mol Biol. 1975 Sep 5;97(1):113-8 PMID: 170409
  10. A second specific endonuclease from Haemophilus aegyptius.
    J Mol Biol. 1975 Jan 5;91(1):121-3 PMID: 171410
  11. Bidirectional replication of plasmid R6K DNA in Escherichia coli; correspondence between origin of replication and position of single-strand break in relaxed complex.
    Proc Natl Acad Sci U S A. 1975 Aug;72(8):2905-9 PMID: 1103126
  12. Studies on the late replication of phage lambda: rolling-circle replication of the wild type and a partially suppressed strain, Oam29 Pam80.
    J Mol Biol. 1975 Oct 25;98(2):305-20 PMID: 1195390
  13. Mode of replication of the conjugative R-plasmid RSF1040 in Escherichia coli.
    J Bacteriol. 1976 Apr;126(1):454-66 PMID: 770431
  14. A specific endonuclease from Arthrobacter luteus.
    J Mol Biol. 1976 Mar 25;102(1):157-65 PMID: 1271462
  15. Lack of a unique termination site for the first round of bacteriophage lambda DNA replication.
    J Mol Biol. 1976 Apr 15;102(3):569-89 PMID: 775112
  16. A specific endonuclease from Haemophilus haemolyticus.
    J Mol Biol. 1976 May 5;103(1):199-208 PMID: 1085372
  17. Mapping of the HhaI and HinfI cleavage sites on simian virus 40 DNA.
    J Mol Biol. 1977 Feb 25;110(2):297-317 PMID: 191618
  18. The nucleotide sequence surrounding the origin of DNA replication of Col E1.
    Nucleic Acids Res. 1977 Sep;4(9):3123-42 PMID: 410007
  19. Filamentous coliphage M13 as a cloning vehicle: insertion of a HindII fragment of the lac regulatory region in M13 replicative form in vitro.
    Proc Natl Acad Sci U S A. 1977 Sep;74(9):3642-6 PMID: 333444
  20. Terminus region of the chromosome in Escherichia coli inhibits replication forks.
    Proc Natl Acad Sci U S A. 1977 Sep;74(9):3927-31 PMID: 333449
  21. Sequence data handling by computer.
    Nucleic Acids Res. 1977 Nov;4(11):4037-51 PMID: 593900
  22. Further procedures for sequence analysis by computer.
    Nucleic Acids Res. 1978 Mar;5(3):1013-6 PMID: 643613
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1981-04-00
Pages
2095-9
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC319290
Subset
IM
Grants
NIGMS NIH HHS · GM 24357 · United States
Databases
GENBANK
J01778
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com