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PMID: 6938962 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Model for lactose repressor protein and its interaction with ligands.

Dunaway M, Manly SP, Matthews KS

Abstract

A model is presented for the structure of the lactose repressor protein and for its interaction with inducer, operator DNA, and nonspecific DNA. The proposed structure is based on experimental evidence from this laboratory and from the literature and is offered as an integration of the available data on this system. Features unique to this model include: (i) interaction of the core region of the protein with the operator, (ii) primary effects of the conformational change in response to inducer on the core-operator interaction, (iii) contacts between all four subunits of the protein and the operator DNA, and (iv) qualitative differences in operator and nonspecific DNA binding.

MeSH Terms
Base Sequence Binding Sites DNA, Bacterial/metabolism Lac Operon Ligands Macromolecular Substances Models, Biological Protein Binding Repressor Proteins/metabolism Transcription Factors/metabolism
Chemicals
DNA, Bacterial Ligands Macromolecular Substances Repressor Proteins Transcription Factors
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Dunaway M
Manly S P
Matthews K S
References (45)
45 references, click to expand
  1. Equilibrium binding of inducer to lac repressor.operator DNA complex.
    J Biol Chem. 1980 Nov 10;255(21):10107-14 PMID: 7000771
  2. Conformational change of the lac repressor induced with the inducer.
    Biochem Biophys Res Commun. 1972 Jun 28;47(6):1444-50 PMID: 4557176
  3. Escherichia coli lactose repressor: isolation of two different homogeneous headpieces and the existence of a hinge region between residues 50 and 60 in the repressor molecule.
    FEBS Lett. 1978 Mar 15;87(2):215-8 PMID: 344067
  4. How lac repressor binds to DNA.
    Nature. 1972 Jun 9;237(5354):322-7 PMID: 4557395
  5. Fluorescence and ultraviolet spectral studies of Lac repressor modified with N-bromosuccinimide.
    J Biol Chem. 1977 Jun 10;252(11):3572-7 PMID: 863896
  6. The lac repressor protein: molecular shape, subunit structure, and proposed model for operator interaction based on structural studies of microcrystals.
    Proc Natl Acad Sci U S A. 1974 Mar;71(3):593-7 PMID: 4595565
  7. Ultraviolet difference spectra of the lactose repressor protein. II. Trypsin core protein.
    Biochim Biophys Acta. 1974 Aug 8;359(2):334-40 PMID: 4605413
  8. Hybrid tetramers of native and core lactose repressor protein. Assessment of operator and nonspecific DNA binding parameters and their relationship.
    J Biol Chem. 1980 Nov 10;255(21):10120-7 PMID: 7000773
  9. Activity changes in lac repressor with cysteine oxidation.
    J Biol Chem. 1979 May 10;254(9):3341-7 PMID: 372189
  10. DNA binding characteristics of lactose repressor and the trypsin-resistant core repressor.
    J Biol Chem. 1980 Nov 10;255(21):10100-6 PMID: 7000770
  11. Construction, isolation and implications of repressor-galactosidase - beta-galactosidase hybrid molecules.
    Eur J Biochem. 1977 Oct 3;79(2):381-6 PMID: 411650
  12. Repressors.
    Adv Protein Chem. 1976;30:1-99 PMID: 779429
  13. 1H NMR study of the lactose repressor from Escherichia coli.
    FEBS Lett. 1978 Dec 15;96(2):335-8 PMID: 365582
  14. Lac repressor. Specific proteolytic destruction of the NH 2 -terminal region and loss of the deoxyribonucleic acid-binding activity.
    J Biol Chem. 1973 Jan 10;248(1):110-21 PMID: 4571224
  15. Sequence-specific interactions of the tight-binding I12-X86 lac repressor with non-operator DNA.
    Nucleic Acids Res. 1980 Feb 11;8(3):487-506 PMID: 7003550
  16. Equilibrium and kinetic studies of Escherichia coli lac repressor-inducer interactions.
    J Mol Biol. 1972 Apr 28;66(1):143-55 PMID: 4557195
  17. Binding of recrystallized and chromatographically purified 8-anilino-1-naphthalenesulfonate to Escherichia coli lac repressor.
    Biochemistry. 1978 Oct 17;17(21):4480-6 PMID: 363141
  18. Differential mobility of the N-terminal headpiece in the lac-repressor protein.
    J Mol Biol. 1979 Feb 25;128(2):259-64 PMID: 372550
  19. N-Bromosuccinimide modification of Lac repressor protein.
    J Biol Chem. 1977 Jun 10;252(11):3565-71 PMID: 324997
  20. Amino-terminal fragments of Escherichia coli lac repressor bind to DNA.
    Nature. 1977 Oct 20;269(5630):668-72 PMID: 339099
  21. Genetic studies of the lac repressor. III. Additional correlation of mutational sites with specific amino acid residues.
    J Mol Biol. 1977 Dec 15;117(3):525-67 PMID: 609095
  22. Modification of the cysteine residues of the lactose repressor protein using chromophoric probes.
    Biochim Biophys Acta. 1977 Jul 22;493(1):24-36 PMID: 328057
  23. The functional repressor parts of a tetrameric lac repressor-beta-galactosidase chimaera are organized as dimers.
    Proc Natl Acad Sci U S A. 1976 Oct;73(10):3529-33 PMID: 790390
  24. Genetic analysis of the active sites of lac repressor.
    Genetics. 1974 Apr;76(4):669-79 PMID: 4599253
  25. An amino-terminal fragment of lac repressor binds specifically to lac operator.
    Proc Natl Acad Sci U S A. 1978 Dec;75(12):5851-4 PMID: 16592594
  26. Kinetic studies of inducer binding to lac repressor.operator complex.
    J Biol Chem. 1980 Nov 10;255(21):10115-9 PMID: 7000772
  27. Inducer binding to lac repressor: effects of poly[d(A-T)] and trypsin digestion.
    Biochem Biophys Res Commun. 1978 Nov 14;85(1):497-504 PMID: 369559
  28. Neutron scattering studies of lac repressor.
    Nature. 1980 Jul 24;286(5771):423-5 PMID: 6772965
  29. Tryptic core protein of lactose repressor binds operator DNA.
    J Biol Chem. 1979 May 10;254(9):3348-53 PMID: 372190
  30. Isolation of amino-terminal fragment of lactose repressor necessary for DNA binding.
    Biochemistry. 1977 Mar 8;16(5):938-43 PMID: 321012
  31. Genetic studies of the lac repressor. XI. On aspects of lac repressor structure suggested by genetic experiments.
    J Mol Biol. 1979 Jun 25;131(2):249-58 PMID: 385891
  32. Association of Escherichia coli lac repressor with poly[d(A-T)] monitored with 8-anilino-1-napthalenesulfonate.
    Biochemistry. 1978 Oct 17;17(21):4487-92 PMID: 363142
  33. Kinetic studies of inducer binding to lactose repressor protein.
    J Biol Chem. 1976 Feb 25;251(4):1171-4 PMID: 765339
  34. Contacts between the lac repressor and the thymines in the lac operator.
    Proc Natl Acad Sci U S A. 1977 Nov;74(11):4973-6 PMID: 270732
  35. Large-scale purification of two forms of active lac operator from plasmids.
    Biochim Biophys Acta. 1980;606(1):113-24 PMID: 6243486
  36. A comparison of lac repressor binding to operator and to nonoperator DNA.
    Biochem Biophys Res Commun. 1975 Feb 3;62(3):704-10 PMID: 1120077
  37. Protein-DNA interaction investigated by binding Escherichia coli lac repressor protein to poly(d(A-U-HgX)).
    J Mol Biol. 1976 May 5;103(1):25-38 PMID: 785008
  38. Lactose repressor protein modified with fluorescein mercuric acetate.
    J Biol Chem. 1978 Jun 25;253(12):4279-86 PMID: 350871
  39. Preferential protection of the minor groove of non-operator DNA by lac repressor against methylation by dimethyl sulphate.
    Nucleic Acids Res. 1976 Jan;3(1):11-8 PMID: 1250692
  40. How lac repressor recognizes lac operator.
    Proc Natl Acad Sci U S A. 1978 Aug;75(8):3578-82 PMID: 278973
  41. lac repressor--operator interaction. II. Effect of galactosides and other ligands.
    J Mol Biol. 1970 Jul 28;51(2):303-14 PMID: 4320936
  42. DNA-binding site of lac repressor probed by dimethylsulfate methylation of lac operator.
    J Mol Biol. 1979 Aug 25;132(4):709-28 PMID: 231106
  43. Binding of synthetic lactose operator DNAs to lactose represessors.
    Proc Natl Acad Sci U S A. 1977 Aug;74(8):3292-6 PMID: 333432
  44. Minimal length of the lactose operator sequence for the specific recognition by the lactose repressor.
    Proc Natl Acad Sci U S A. 1977 Mar;74(3):966-70 PMID: 265588
  45. The general affinity of lac repressor for E. coli DNA: implications for gene regulation in procaryotes and eucaryotes.
    Cell. 1975 Feb;4(2):107-11 PMID: 1092468
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1980-12-00
Pages
7181-5
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC350465
Subset
IM
Grants
NIGMS NIH HHS · GM 22441-04 · United States
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