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PMID: 6877241 Published · ppublish English Journal Article

Interruption of an alpha-satellite array by a short member of the KpnI family of interspersed, highly repeated monkey DNA sequences.

Molecular and cellular biology ·Vol. 3 ·No. 6 ·1983-06-00 ·Pages 967-73

Thayer RE, Singer MF

Abstract

We describe here the interruption of a cloned African green monkey alpha-satellite array by an 829-base-pair-long nonsatellite DNA segment. Hybridization experiments indicate that the sequences within the interruption are homologous to segments frequently found in the 6-kilobase-pair-long members of the KpnI family of long, interspersed repeats. These data confirm and extend earlier results suggesting that sequences common to the KpnI family can occur independently of one another and in segments of variable lengths. The 829-base-pair-long segment, which is termed KpnI-RET, contains a terminal stretch of adenosine residues preceded by two typical but overlapping polyadenylation sites. KpnI-RET is flanked by direct repeats of a 14-base-pair-long segment of alpha-satellite that occurs only once in the satellite consensus sequence. These structural features suggest that KpnI-RET was inserted into the satellite array as a movable element.

MeSH Terms
Animals Base Sequence Cercopithecus/genetics Chlorocebus aethiops/genetics Cloning, Molecular DNA, Satellite/genetics Genetic Linkage Repetitive Sequences, Nucleic Acid
Chemicals
DNA, Satellite
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Thayer R E
Singer M F
References (31)
31 references, click to expand
  1. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  2. Evolution of repeated DNA sequences by unequal crossover.
    Science. 1976 Feb 13;191(4227):528-35 PMID: 1251186
  3. Screening lambdagt recombinant clones by hybridization to single plaques in situ.
    Science. 1977 Apr 8;196(4286):180-2 PMID: 322279
  4. Construction and characterization of new cloning vehicles. II. A multipurpose cloning system.
    Gene. 1977;2(2):95-113 PMID: 344137
  5. Highly reiterated sequences of SIMIANSIMIANSIMIANSIMIANSIMIAN.
    Science. 1978 Apr 28;200(4340):394-402 PMID: 205944
  6. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  7. Computer analysis of nucleic acids and proteins.
    Methods Enzymol. 1980;65(1):595-609 PMID: 6154871
  8. Transposable elements.
    Cell. 1980 Jul;20(3):579-95 PMID: 6251969
  9. Cloning and characterization of DNA sequences surrounding the human gamma-, delta-, and beta-globin genes.
    Proc Natl Acad Sci U S A. 1980 Jul;77(7):4229-33 PMID: 6254016
  10. A family of long reiterated DNA sequences, one copy of which is next to the human beta globin gene.
    Nucleic Acids Res. 1980 Dec 20;8(24):6113-28 PMID: 6258162
  11. Sequence relationships between single repeat units of highly reiterated African Green monkey DNA.
    Nucleic Acids Res. 1981 Jan 10;9(1):169-81 PMID: 6259618
  12. Isolation and characterization of cloned human DNA fragments carrying reiterated sequences common to both autosomes and the X chromosome.
    Nucleic Acids Res. 1981 Apr 24;9(8):1853-72 PMID: 6264397
  13. Toward a molecular paleontology of primate genomes. II. The KpnI families of alphoid DNAs.
    Chromosoma. 1981;83(1):127-44 PMID: 6266782
  14. Ribosomal insertion-like elements in Drosophila melanogaster are interspersed with mobile sequences.
    Cell. 1981 Aug;25(2):399-408 PMID: 6269745
  15. Interspersed repeated sequences in the African green monkey genome that are homologous to the human Alu family.
    Nucleic Acids Res. 1981 Nov 11;9(21):5553-68 PMID: 6273798
  16. Direct repeats flank three small nuclear RNA pseudogenes in the human genome.
    Cell. 1981 Oct;26(1 Pt 1):11-7 PMID: 6173130
  17. Base sequence studies of 300 nucleotide renatured repeated human DNA clones.
    J Mol Biol. 1981 Sep 5;151(1):17-33 PMID: 6276559
  18. Short interspersed repetitive DNA elements in eucaryotes: transposable DNA elements generated by reverse transcription of RNA pol III transcripts?
    Cell. 1981 Oct;26(2 Pt 2):141-2 PMID: 6277493
  19. A monkey Alu sequence is flanked by 13-base pair direct repeats by an interrupted alpha-satellite DNA sequence.
    Proc Natl Acad Sci U S A. 1982 Mar;79(5):1497-500 PMID: 6280186
  20. SINEs and LINEs: highly repeated short and long interspersed sequences in mammalian genomes.
    Cell. 1982 Mar;28(3):433-4 PMID: 6280868
  21. The Alu family of dispersed repetitive sequences.
    Science. 1982 Jun 4;216(4550):1065-70 PMID: 6281889
  22. KpnI families of long, interspersed repetitive DNAs in human and other primate genomes.
    Nucleic Acids Res. 1982 May 25;10(10):3175-93 PMID: 6285290
  23. Nucleotide sequence definition of a major human repeated DNA, the Hind III 1.9 kb family.
    Nucleic Acids Res. 1982 May 25;10(10):3211-9 PMID: 6285292
  24. Genomic representation of the Hind II 1.9 kb repeated DNA.
    Nucleic Acids Res. 1982 May 25;10(10):3221-39 PMID: 6285293
  25. Human 7SL RNA consists of a 140 nucleotide middle-repetitive sequence inserted in an alu sequence.
    Cell. 1982 May;29(1):195-202 PMID: 6179628
  26. Organization of African green monkey DNA at junctions between alpha-satellite and other DNA sequences.
    J Mol Biol. 1982 May 15;157(2):195-211 PMID: 6213785
  27. Highly repeated sequences in mammalian genomes.
    Int Rev Cytol. 1982;76:67-112 PMID: 6749748
  28. Members of the KpnI family of long interspersed repeated sequences join and interrupt alpha-satellite in the monkey genome.
    Nucleic Acids Res. 1983 Jan 25;11(2):321-38 PMID: 6298721
  29. Deca-satellite: a highly polymorphic satellite that joins alpha-satellite in the African green monkey genome.
    J Mol Biol. 1983 Mar 15;164(4):493-511 PMID: 6302277
  30. Human U1 RNA pseudogenes may be generated by both DNA- and RNA-mediated mechanisms.
    Mol Cell Biol. 1982 Jul;2(7):815-28 PMID: 6085956
  31. Processed genes: a dispersed human immunoglobulin gene bearing evidence of RNA-type processing.
    Nature. 1982 Mar 25;296(5855):321-5 PMID: 6801526
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1983-06-00
Pages
967-73
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC368625
Subset
IM
Databases
GENBANK
K00550
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