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PMID: 3887409 Published · ppublish English Journal Article

Active site and complete sequence of the suicidal methyltransferase that counters alkylation mutagenesis.

Demple B, Sedgwick B, Robins P, Totty N, Waterfield MD, Lindahl T

Abstract

The inducible resistance to alkylation mutagenesis and killing in Escherichia coli (the adaptive response) is controlled by the ada gene. The Ada protein acts both as a positive regulator of the response and as a DNA repair enzyme, correcting premutagenic O6-alkylguanine in DNA by suicidal transfer of the alkyl group to one of its own cysteine residues. We have determined the DNA sequence of the cloned ada+ gene and its regulatory region. The data reveal potential sites of ada autoregulation. Amino acid sequence determinations show that the active center for the O6-methylguanine-DNA methyltransferase is located close to the polypeptide COOH terminus and has the unusual sequence -Pro-Cys-His-, preceded by a very hydrophobic region. These same structural features are present at the active site of thymidylate synthase, suggesting a common chemical mechanism for activation of the cysteine.

MeSH Terms
Alkylation Amino Acid Sequence Base Sequence Binding Sites DNA Repair Escherichia coli/genetics,metabolism Genes, Bacterial Methyltransferases/genetics,metabolism Mutation O(6)-Methylguanine-DNA Methyltransferase Operon Thymidylate Synthase/metabolism
Chemicals
Methyltransferases Thymidylate Synthase O(6)-Methylguanine-DNA Methyltransferase
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Demple B
Sedgwick B
Robins P
Totty N
Waterfield M D
Lindahl T
References (41)
41 references, click to expand
  1. pEMBL: a new family of single stranded plasmids.
    Nucleic Acids Res. 1983 Mar 25;11(6):1645-55 PMID: 6300771
  2. O6-Methylguanine-DNA methyltransferase of human lymphoid cells: structural and kinetic properties and absence in repair-deficient cells.
    Cancer Res. 1983 Jul;43(7):3247-52 PMID: 6342762
  3. Compilation and analysis of Escherichia coli promoter DNA sequences.
    Nucleic Acids Res. 1983 Apr 25;11(8):2237-55 PMID: 6344016
  4. Complete nucleotide sequence of bacteriophage T7 DNA and the locations of T7 genetic elements.
    J Mol Biol. 1983 Jun 5;166(4):477-535 PMID: 6864790
  5. The incorporation of O6-methyldeoxyguanosine and O4-methyldeoxythymidine monophosphates into DNA by DNA polymerases I and alpha.
    Nucleic Acids Res. 1983 Jun 25;11(12):4185-93 PMID: 6866769
  6. Partial NH2- and COOH-terminal sequence and cyanogen bromide peptide analysis of Escherichia coli sn-glycerol-3-phosphate acyltransferase.
    J Biol Chem. 1983 Sep 25;258(18):10862-6 PMID: 6350296
  7. O6-methylguanine methyltransferase in rat liver.
    Biochemistry. 1983 Aug 2;22(16):3759-63 PMID: 6615799
  8. Molecular cloning of a gene which regulates the adaptive response to alkylating agents in Escherichia coli.
    Mol Gen Genet. 1983;191(3):466-72 PMID: 6355769
  9. Cross-linking of DNA induced by chloroethylnitrosourea is presented by O6-methylguanine-DNA methyltransferase.
    Nucleic Acids Res. 1983 Nov 25;11(22):7743-58 PMID: 6359062
  10. Induction of mammary carcinomas in rats by nitroso-methylurea involves malignant activation of H-ras-1 locus by single point mutations.
    Nature. 1983 Dec 15-21;306(5944):658-61 PMID: 6318112
  11. Close similarity of epidermal growth factor receptor and v-erb-B oncogene protein sequences.
    Nature. 1984 Feb 9-15;307(5951):521-7 PMID: 6320011
  12. Inducible repair of phosphotriesters in Escherichia coli.
    Proc Natl Acad Sci U S A. 1983 Dec;80(24):7380-4 PMID: 6369314
  13. Inducible repair of O-alkylated DNA pyrimidines in Escherichia coli.
    EMBO J. 1984 Mar;3(3):545-50 PMID: 6370685
  14. Mutagenesis and inducible responses to deoxyribonucleic acid damage in Escherichia coli.
    Microbiol Rev. 1984 Mar;48(1):60-93 PMID: 6371470
  15. Suicide inactivation of the E. coli O6-methylguanine-DNA methyltransferase.
    EMBO J. 1982;1(11):1359-63 PMID: 6765195
  16. Induction of specific Escherichia coli genes by sublethal treatments with alkylating agents.
    Proc Natl Acad Sci U S A. 1984 Jul;81(13):4110-4 PMID: 6330740
  17. Probing the infra-structure of thymidylate synthase and deoxycytidylate deaminase.
    Adv Enzyme Regul. 1984;22:413-30 PMID: 6433661
  18. Induction of resistance to alkylating agents in E. coli: the ada+ gene product serves both as a regulatory protein and as an enzyme for repair of mutagenic damage.
    EMBO J. 1984 Sep;3(9):2151-7 PMID: 6092060
  19. In vivo mutagenesis by O6-methylguanine built into a unique site in a viral genome.
    Proc Natl Acad Sci U S A. 1984 Oct;81(20):6271-5 PMID: 6093094
  20. Structure and expression of the alkA gene of Escherichia coli involved in adaptive response to alkylating agents.
    J Biol Chem. 1984 Nov 25;259(22):13730-6 PMID: 6094528
  21. Molecular cloning and characterization of the alkB gene of Escherichia coli.
    Mol Gen Genet. 1985;198(2):263-9 PMID: 3884973
  22. Quantitation of the adaptive response to alkylating agents.
    Nature. 1979 Jul 5;280(5717):74-6 PMID: 15305584
  23. Structure of papain.
    Nature. 1968 Jun 8;218(5145):929-32 PMID: 5681232
  24. Analysis of bacteriophage deoxyribonucleic acid sequences methylated by host- and R-factor-controlled enzymes.
    J Bacteriol. 1975 Aug;123(2):768-70 PMID: 1097428
  25. A new pathway for DNA repair in Escherichia coli.
    Nature. 1977 May 19;267(5608):281-3 PMID: 325420
  26. An adaptive response of E. coli to low levels of alkylating agent: comparison with previously characterised DNA repair pathways.
    Mol Gen Genet. 1977 Nov 29;157(1):1-9 PMID: 414071
  27. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  28. Genetic studies of the lac repressor. IV. Mutagenic specificity in the lacI gene of Escherichia coli.
    J Mol Biol. 1977 Dec 15;117(3):577-606 PMID: 416218
  29. Isolation and characterization of Escherichia coli K-12 mutants unable to induce the adaptive response to simple alkylating agents.
    J Bacteriol. 1979 Sep;139(3):783-91 PMID: 383692
  30. Promoter mutations in the transfer RNA gene tyrT of Escherichia coli.
    Proc Natl Acad Sci U S A. 1979 Sep;76(9):4303-7 PMID: 116232
  31. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  32. Repair of alkylated DNA in Escherichia coli. Methyl group transfer from O6-methylguanine to a protein cysteine residue.
    J Biol Chem. 1980 Nov 25;255(22):10569-71 PMID: 7000780
  33. Similar amino acid sequences: chance or common ancestry?
    Science. 1981 Oct 9;214(4517):149-59 PMID: 7280687
  34. Translational initiation in prokaryotes.
    Annu Rev Microbiol. 1981;35:365-403 PMID: 6170248
  35. Genetic mapping of ada and adc mutations affecting the adaptive response of Escherichia coli to alkylating agents.
    J Bacteriol. 1982 May;150(2):984-8 PMID: 7040349
  36. Induction of a DNA glycosylase for N-methylated purines is part of the adaptive response to alkylating agents.
    Nature. 1982 Apr 22;296(5859):770-3 PMID: 7040983
  37. Adaptation to alkylation resistance involves the induction of a DNA glycosylase.
    Nature. 1982 Apr 22;296(5859):773-5 PMID: 7040984
  38. Molecular cloning and nucleotide sequence of full-length of cDNA coding for porcine gastrin.
    Proc Natl Acad Sci U S A. 1982 Feb;79(4):1049-53 PMID: 6951161
  39. Repair of alkylated DNA in Escherichia coli. Physical properties of O6-methylguanine-DNA methyltransferase.
    J Biol Chem. 1982 Nov 25;257(22):13776-80 PMID: 6754717
  40. Repressor structure and the mechanism of positive control.
    Cell. 1983 Feb;32(2):319-25 PMID: 6218886
  41. Rapid similarity searches of nucleic acid and protein data banks.
    Proc Natl Acad Sci U S A. 1983 Feb;80(3):726-30 PMID: 6572363
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1985-05-00
Pages
2688-92
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC397630
Subset
IM
Databases
GENBANK
M10315
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