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PMID: 3088203 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Sequences and repertoire of human T cell receptor alpha chain variable region genes in mature T lymphocytes.

The Journal of experimental medicine ·Vol. 164 ·No. 1 ·1986-07-01 ·Pages 90-103

Yoshikai Y, Kimura N, Toyonaga B, Mak TW

Abstract

24 human T cell receptor alpha chain messages have been examined by cDNA sequence analysis and Southern blot. The data indicate that there are approximately 40 alpha chain T cell receptor variable gene segments, which can be divided into 12 families. Comparison of the J gene segments from the cDNAs to previously determined germline J alpha sequences places the number of J alpha gene segments over 21, and indicates their number to be approximately 55. Identical nucleotide sequences in independent isolates of V alpha and J alpha gene segments indicate that hypermutation may not be a common mechanism for the expansion of diversity in these genes, and suggest that the major source of diversity within the alpha chain repertoire is a result of recombinational joinings between germline V alpha and J alpha sequences, combined with imprecise junctional joining. Analysis of the V regions of these alpha chain messages reveals the presence of three domains of hypervariability roughly analogous to the CDR1, CDR2, and CDR3 regions of immunoglobulin.

MeSH Terms
Amino Acid Sequence Base Sequence Cloning, Molecular Collodion DNA/isolation & purification Electrophoresis, Agar Gel Genes Humans Immunoglobulin Heavy Chains/genetics Immunoglobulin Variable Region/genetics Immunoglobulin alpha-Chains/genetics Nucleic Acid Hybridization Receptors, Antigen, T-Cell/genetics
Chemicals
Immunoglobulin Heavy Chains Immunoglobulin Variable Region Immunoglobulin alpha-Chains Receptors, Antigen, T-Cell Collodion DNA
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Yoshikai Y
Kimura N
Toyonaga B
Mak T W
References (25)
25 references, click to expand
  1. Organization and sequences of the diversity, joining, and constant region genes of the human T-cell receptor beta chain.
    Proc Natl Acad Sci U S A. 1985 Dec;82(24):8624-8 PMID: 3866244
  2. Variability and repertoire size of T-cell receptor V alpha gene segments.
    Nature. 1985 Oct 3-9;317(6036):430-4 PMID: 2995827
  3. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  4. MHC-restricted cytotoxic T cells: studies on the biological role of polymorphic major transplantation antigens determining T-cell restriction-specificity, function, and responsiveness.
    Adv Immunol. 1979;27:51-177 PMID: 92183
  5. Sets of immunoglobulin V kappa genes homologous to ten cloned V kappa sequences: implications for the number of germline V kappa genes.
    J Mol Appl Genet. 1981;1(2):103-16 PMID: 6286818
  6. Clonotypic structures involved in antigen-specific human T cell function. Relationship to the T3 molecular complex.
    J Exp Med. 1983 Feb 1;157(2):705-19 PMID: 6185617
  7. The major histocompatibility complex-restricted antigen receptor on T cells. I. Isolation with a monoclonal antibody.
    J Exp Med. 1983 Apr 1;157(4):1149-69 PMID: 6601175
  8. The mouse T cell receptor: structural heterogeneity of molecules of normal T cells defined by xenoantiserum.
    Cell. 1983 Oct;34(3):739-46 PMID: 6194888
  9. A human T cell-specific cDNA clone encodes a protein having extensive homology to immunoglobulin chains.
    Nature. 1984 Mar 8-14;308(5955):145-9 PMID: 6336315
  10. Isolation of cDNA clones encoding T cell-specific membrane-associated proteins.
    Nature. 1984 Mar 8-14;308(5955):149-53 PMID: 6199676
  11. The human T cell antigen receptor is encoded by variable, diversity, and joining gene segments that rearrange to generate a complete V gene.
    Cell. 1984 Jun;37(2):393-401 PMID: 6202421
  12. The T cell receptor beta chain genes are located on chromosome 6 in mice and chromosome 7 in humans.
    Cell. 1984 Jul;37(3):1091-9 PMID: 6331676
  13. Genomic organization and sequence of T-cell receptor beta-chain constant- and joining-region genes.
    Nature. 1984 Aug 2-8;310(5976):387-91 PMID: 6336329
  14. The immunoglobulin heavy chain variable region (Igh-V) locus in the mouse. I. One hundred Igh-V genes comprise seven families of homologous genes.
    Eur J Immunol. 1984 Oct;14(10):922-30 PMID: 6092095
  15. Primary structure of human T-cell receptor alpha-chain.
    Nature. 1984 Dec 20-1985 Jan 2;312(5996):771-5 PMID: 6440030
  16. Chromosomal locations of the murine T-cell receptor alpha-chain gene and the T-cell gamma gene.
    Science. 1985 Feb 22;227(4689):941-5 PMID: 3918347
  17. T cell receptor alpha chain genes are located on chromosome 14 at 14q11-14q12 in humans.
    J Exp Med. 1985 May 1;161(5):1255-60 PMID: 3872924
  18. Chromosomal localization of the human T cell receptor beta-chain genes.
    Cell. 1985 May;41(1):335 PMID: 3995587
  19. Analysis of cDNA clones specific for human T cells and the alpha and beta chains of the T-cell receptor heterodimer from a human T-cell line.
    Proc Natl Acad Sci U S A. 1985 May;82(10):3430-4 PMID: 3873654
  20. T-cell receptor beta-chain expression: dependence on relatively few variable region genes.
    Science. 1985 Aug 9;229(4713):566-70 PMID: 3875151
  21. Diversity and structure of genes of the alpha family of mouse T-cell antigen receptor.
    Nature. 1985 Aug 29-Sep 4;316(6031):783-7 PMID: 3839904
  22. Unusual organization and diversity of T-cell receptor alpha-chain genes.
    Nature. 1985 Aug 29-Sep 4;316(6031):828-32 PMID: 2993907
  23. Genomic organization of the genes encoding mouse T-cell receptor alpha-chain.
    Nature. 1985 Aug 29-Sep 4;316(6031):832-6 PMID: 2993908
  24. Organization and sequences of the variable, joining and constant region genes of the human T-cell receptor alpha-chain.
    Nature. 1985 Aug 29-Sep 4;316(6031):837-40 PMID: 2993909
  25. An analysis of the sequences of the variable regions of Bence Jones proteins and myeloma light chains and their implications for antibody complementarity.
    J Exp Med. 1970 Aug 1;132(2):211-50 PMID: 5508247
Article Info
Journal
The Journal of experimental medicine
Abbr.
J Exp Med
ISSN
0022-1007
Published
1986-07-01
Pages
90-103
Language
English
Region
United States
NLM ID
2985109R
PMCID
PMC2188198
Subset
IM
Databases
GENBANK
M13722, M13723, M13724, M13725, M13726, M13727, M13728, M13729, M13730, M13731, M13732, M13733, M13734, M13735, M13736, M13737, M13738, M13739, M13740, M13741, M13742, M13743, M13744, M13745
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