Home LiteratureArticle Details
PMID: 3019680 Published · ppublish English Journal Article

Identification of the stable free radical tyrosine residue in ribonucleotide reductase.

The EMBO journal ·Vol. 5 ·No. 8 ·1986-08-00 ·Pages 2037-40

Larsson A, Sjöberg BM

Abstract

The small subunit of iron-dependent ribonucleotide reductases contains a stable organic free radical, which is essential for enzyme activity and which is localized to a tyrosine residue. Tyrosine-122 in the B2 subunit of Escherichia coli ribonucleotide reductase has been changed into a phenylalanine. The mutation was introduced with oligonucleotide-directed mutagenesis in an M13 recombinant and verified by DNA sequencing. Purified native and mutant B2 protein were found to have the same size, iron content and iron-related absorption spectrum. The sole difference observed is that the mutant protein lacks tyrosyl radical and enzymatic activity. These results identify Tyr122 of E. coli protein B2 as the tyrosyl radical residue. An expression vector was constructed for manipulation and expression of ribonucleotide reductase subunits. It contains the entire nrd operon with its own promoter in a 2.3-kb fragment from pBR322. Both the B1 and the B2 subunits were expressed at a 25-35 times higher level as compared to the host strain.

MeSH Terms
Coliphages/enzymology,genetics DNA Restriction Enzymes Electron Spin Resonance Spectroscopy Escherichia coli/enzymology,genetics Free Radicals Genetic Vectors Macromolecular Substances Mutation Plasmids Ribonucleotide Reductases/genetics Tyrosine
Chemicals
Free Radicals Macromolecular Substances Tyrosine Ribonucleotide Reductases DNA Restriction Enzymes
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Larsson A
Sjöberg B M
References (30)
30 references, click to expand
  1. Primary structure of the Escherichia coli ribonucleoside diphosphate reductase operon.
    Proc Natl Acad Sci U S A. 1984 Jul;81(14):4294-7 PMID: 6087316
  2. Characterization of the mRNA coding for ribonucleoside diphosphate reductase in Escherichia coli.
    J Bacteriol. 1983 Dec;156(3):1192-7 PMID: 6196349
  3. Uniformly spaced banding pattern in DNA sequencing gels by use of field-strength gradient.
    J Biochem Biophys Methods. 1984 Nov;10(1-2):83-90 PMID: 6520329
  4. Overproduction of the B1 subunit of ribonucleotide reductase with gene amplification.
    Acta Chem Scand B. 1984;38(10):905-7 PMID: 6397021
  5. Identification of the stable free radical tyrosine residue in ribonucleotide reductase. A sequence comparison.
    FEBS Lett. 1985 Apr 8;183(1):99-102 PMID: 2984052
  6. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.
    Gene. 1985;33(1):103-19 PMID: 2985470
  7. Protein B1 of ribonucleotide reductase. Direct analytical data and comparisons with data indirectly deduced from the nucleotide sequence of the Escherichia coli nrdA gene.
    Eur J Biochem. 1985 Aug 1;150(3):423-7 PMID: 3894026
  8. Cloning, overproduction, and purification of the B2 subunit of ribonucleoside-diphosphate reductase.
    J Bacteriol. 1986 Feb;165(2):363-6 PMID: 3511029
  9. The tyrosyl free radical in ribonucleotide reductase.
    Environ Health Perspect. 1985 Dec;64:139-49 PMID: 3007085
  10. Overproduction and purification of the B2 subunit of ribonucleotide reductase from Escherichia coli.
    J Biol Chem. 1986 Apr 25;261(12):5658-62 PMID: 3007519
  11. The bacteriophage T4 gene for the small subunit of ribonucleotide reductase contains an intron.
    EMBO J. 1986 Aug;5(8):2031-6 PMID: 3530746
  12. Protein measurement with the Folin phenol reagent.
    J Biol Chem. 1951 Nov;193(1):265-75 PMID: 14907713
  13. Studies on succinic dehydrogenase. VII. Valency state of the iron in beef heart succinic dehydrogenase.
    J Biol Chem. 1957 Dec;229(2):763-70 PMID: 13502338
  14. Repetitive extragenic palindromic sequences: a major component of the bacterial genome.
    Cell. 1984 Jul;37(3):1015-26 PMID: 6378385
  15. Iron and free radical in ribonucleotide reductase. Exchange of iron and Mössbauer spectroscopy of the protein B2 subunit of the Escherichia coli enzyme.
    J Biol Chem. 1973 Nov 10;248(21):7464-72 PMID: 4355582
  16. High resolution two-dimensional electrophoresis of proteins.
    J Biol Chem. 1975 May 25;250(10):4007-21 PMID: 236308
  17. Pleiotropic effects of a DNA adenine methylation mutation (dam-3) in Escherichia coli K12.
    Mutat Res. 1975 Apr;28(1):15-26 PMID: 167279
  18. Ribonucleoside diphosphate reductase from Escherichia coli. An immunological assay and a novel purification from an overproducing strain lysogenic for phage lambdadnrd.
    J Biol Chem. 1977 Sep 10;252(17):6132-8 PMID: 197082
  19. Purification of thioredoxin, thioredoxin reductase, and glutathione reductase by affinity chromatography.
    J Biol Chem. 1977 Sep 25;252(18):6367-72 PMID: 330529
  20. Ribonucleoside diphosphate reductase (Escherichia coli).
    Methods Enzymol. 1978;51:227-37 PMID: 357894
  21. The iron center in ribonucleotide reductase from Escherichia coli.
    J Biol Chem. 1980 Jul 25;255(14):6706-12 PMID: 6248531
  22. Construction and characterization of hybrid plasmids containing the Escherichia coli nrd region.
    J Bacteriol. 1980 Aug;143(2):561-8 PMID: 7009552
  23. Construction and characterization of new cloning vehicles. V. Mobilization and coding properties of pBR322 and several deletion derivatives including pBR327 and pBR328.
    Gene. 1981 Jan-Feb;13(1):25-35 PMID: 6263753
  24. Altered ribonucleotide reductase obtained by in vitro mutagenesis of cloned Escherichia coli DNA.
    Acta Chem Scand B. 1981;35(2):143-4 PMID: 7025538
  25. Structure of the tyrosyl radical in bacteriophage T4-induced ribonucleotide reductase.
    J Biol Chem. 1982 Jan 10;257(1):366-9 PMID: 6273437
  26. Characterization of the free radical of mammalian ribonucleotide reductase.
    J Biol Chem. 1982 May 25;257(10):5711-5 PMID: 6279610
  27. Induction of a new ribonucleotide reductase after infection of mouse L cells with pseudorabies virus.
    J Virol. 1982 Mar;41(3):893-900 PMID: 6284979
  28. A substrate radical intermediate in the reaction between ribonucleotide reductase from Escherichia coli and 2'-azido-2'-deoxynucleoside diphosphates.
    J Biol Chem. 1983 Jul 10;258(13):8060-7 PMID: 6305969
  29. Buffer gradient gels and 35S label as an aid to rapid DNA sequence determination.
    Proc Natl Acad Sci U S A. 1983 Jul;80(13):3963-5 PMID: 6575390
  30. Oligonucleotide-directed mutagenesis: a simple method using two oligonucleotide primers and a single-stranded DNA template.
    DNA. 1984 Dec;3(6):479-88 PMID: 6096101
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
1986-08-00
Pages
2037-40
Language
English
Region
England
NLM ID
8208664
PMCID
PMC1167075
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com