Abstract
The Zymomonas mobilis gene encoding phosphoglycerate kinase (EC 2.7.3.2), pgk, has been cloned into Escherichia coli and sequenced. It consists of 336 amino acids, including the N-terminal methionine, with a molecular weight of 41,384. This promoterless gene is located 225 base pairs downstream from the gap gene and is part of the gap operon. Previous studies have shown that the specific activities of glyceraldehyde-3-phosphate dehydrogenase and phosphoglycerate kinase do not change coordinately in Z. mobilis, although the two enzymes appear to be under the control of a common promoter. The translated amino acid sequence for the Z. mobilis phosphoglycerate kinase is less conserved than those of eucaryotic genes. A comparison of known sequences for phosphoglycerate kinase revealed a high degree of conservation of structure with 102 amino acid positions being retained by all. In general, the amino acid positions at the boundaries of beta-sheet and alpha-helical regions and those connecting these regions were more highly conserved than the amino acid positions within regions of secondary structure.
MeSH Terms
Amino Acid Sequence
Base Sequence
Cloning, Molecular
Codon/genetics
DNA Restriction Enzymes
Electrophoresis, Polyacrylamide Gel
Escherichia coli/genetics
Gene Expression Regulation
Genes, Bacterial
Glyceraldehyde-3-Phosphate Dehydrogenases/genetics
Gram-Negative Bacteria/enzymology,genetics
Molecular Sequence Data
Operon
Phosphoglycerate Kinase/genetics
Sequence Homology, Nucleic Acid
Transcription, Genetic
Chemicals
Codon
Glyceraldehyde-3-Phosphate Dehydrogenases
Phosphoglycerate Kinase
DNA Restriction Enzymes
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Conway T
Department of Microbiology and Cell Science, University of Florida, Gainesville 32611.
Ingram L O
References (26)
26 references, click to expand
-
Gene expression in Zymomonas mobilis: promoter structure and identification of membrane anchor sequences forming functional lacZ' fusion proteins.
J Bacteriol. 1987 Jun;169(6):2327-35
PMID: 3034853
-
Chromosomal mapping of mutations affecting glycerol and glucose catabolism in Pseudomonas aeruginosa PAO.
J Bacteriol. 1985 Jun;162(3):872-80
PMID: 3922955
-
Sequence, structure and activity of phosphoglycerate kinase: a possible hinge-bending enzyme.
Nature. 1979 Jun 28;279(5716):773-7
PMID: 450128
-
Glycolytic flux in Zymomonas mobilis: enzyme and metabolite levels during batch fermentation.
J Bacteriol. 1987 Aug;169(8):3726-36
PMID: 3611027
-
Isolation and properties of the glycolytic enzymes from Zymomonas mobilis. The five enzymes from glyceraldehyde-3-phosphate dehydrogenase through to pyruvate kinase.
Biochem J. 1986 Aug 15;238(1):275-81
PMID: 3026343
-
Linkage map of Escherichia coli K-12, edition 7.
Microbiol Rev. 1983 Jun;47(2):180-230
PMID: 6348505
-
Rapid similarity searches of nucleic acid and protein data banks.
Proc Natl Acad Sci U S A. 1983 Feb;80(3):726-30
PMID: 6572363
-
Topogenesis of microbody enzymes: a sequence comparison of the genes for the glycosomal (microbody) and cytosolic phosphoglycerate kinases of Trypanosoma brucei.
EMBO J. 1985 Dec 30;4(13B):3811-7
PMID: 3004970
-
Glyceraldehyde-3-phosphate dehydrogenase gene from Zymomonas mobilis: cloning, sequencing, and identification of promoter region.
J Bacteriol. 1987 Dec;169(12):5653-62
PMID: 3680173
-
Structure of the human phosphoglycerate kinase gene and the intron-mediated evolution and dispersal of the nucleotide-binding domain.
Proc Natl Acad Sci U S A. 1985 Oct;82(20):6965-9
PMID: 2995995
-
Codon selection in yeast.
J Biol Chem. 1982 Mar 25;257(6):3026-31
PMID: 7037777
-
Transcription and processing signals in the 3-phosphoglycerate kinase (PGK) gene from Aspergillus nidulans.
Gene. 1986;44(1):97-105
PMID: 3533726
-
A single amino acid substitution (Asp leads to Asn) in a phosphoglycerate kinase variant (PGK München) associated with enzyme deficiency.
J Biol Chem. 1980 Jul 10;255(13):6421-3
PMID: 7391028
-
Mutations of Bacteria from Virus Sensitivity to Virus Resistance.
Genetics. 1943 Nov;28(6):491-511
PMID: 17247100
-
Transcription of the phosphoglycerate kinase gene of Saccharomyces cerevisiae increases when fermentative cultures are stressed by heat-shock.
Eur J Biochem. 1986 Dec 15;161(3):525-31
PMID: 3539592
-
Yeast phosphoglycerate kinase: investigation of catalytic function by site-directed mutagenesis.
Biochem J. 1987 Jan 15;241(2):609-14
PMID: 3297036
-
Evolutionary conservation of the substrate-binding cleft of phosphoglycerate kinases.
FEBS Lett. 1986 Aug 18;204(2):313-7
PMID: 3525226
-
A convenient and adaptable package of computer programs for DNA and protein sequence management, analysis and homology determination.
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 2):643-55
PMID: 6320100
-
The complete amino acid sequence of yeast phosphoglycerate kinase.
Biochem J. 1983 Apr 1;211(1):199-218
PMID: 6347186
-
Cloning and sequencing of the alcohol dehydrogenase II gene from Zymomonas mobilis.
J Bacteriol. 1987 Jun;169(6):2591-7
PMID: 3584063
-
Expression Vector for Zymomonas mobilis.
Appl Environ Microbiol. 1987 Feb;53(2):235-41
PMID: 16347272
-
Phosphoglycerate kinase deficiency myopathy: biochemical and immunological studies of the mutant enzyme.
Muscle Nerve. 1984 Sep;7(7):542-51
PMID: 6544372
-
Yeast glyceraldehyde-3-phosphate dehydrogenase. Evidence that subunit cooperativity in catalysis can be controlled by the formation of a complex with phosphoglycerate kinase.
Eur J Biochem. 1985 May 15;149(1):67-72
PMID: 3888624
-
Promoter and nucleotide sequences of the Zymomonas mobilis pyruvate decarboxylase.
J Bacteriol. 1987 Mar;169(3):949-54
PMID: 3029037
-
ColE1 hybrid plasmids for Escherichia coli genes of glycolysis and the hexose monophosphate shunt.
J Bacteriol. 1979 Jan;137(1):502-6
PMID: 368027
-
Genome organization in Pseudomonas.
Annu Rev Microbiol. 1986;40:79-105
PMID: 3535656