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PMID: 2442148 Published · ppublish English Journal Article Review

Molecular genetics of the VDAC ion channel: structural model and sequence analysis.

Journal of bioenergetics and biomembranes ·Vol. 19 ·No. 4 ·1987-08-00 ·Pages 341-50

Forte M, Guy HR, Mannella CA

Abstract

The voltage-dependent anion-selective channel of the outer mitochondrial membrane provides a unique system in which to study the molecular basis of voltage gating of ion flow. We have cloned and sequenced a cDNA coding for this protein in yeast. From the derived amino acid sequence, we have generated a preliminary model for the secondary structure of the protein which suggests that the protein forms a "beta-barrel" type structure. Comparison of the VDAC amino acid sequence with that of the bacterial porins has indicated that the two classes of molecules appear to be unrelated.

MeSH Terms
Amino Acid Sequence Base Sequence Genes Genes, Fungal Ion Channels/physiology Membrane Proteins/genetics Mitochondria/physiology Porins Saccharomyces cerevisiae/genetics Voltage-Dependent Anion Channels
Chemicals
Ion Channels Membrane Proteins Porins Voltage-Dependent Anion Channels
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Forte M
Guy H R
Mannella C A
References (24)
24 references, click to expand
  1. Reconstitution in planar lipid bilayers of a voltage-dependent anion-selective channel obtained from paramecium mitochondria.
    J Membr Biol. 1976 Dec 28;30(2):99-120 PMID: 1011248
  2. Porin channel triplets merge into single outlets in Escherichia coli outer membranes.
    Nature. 1985 Oct 17-23;317(6038):643-5 PMID: 2997617
  3. Structure and mode of action of a voltage dependent anion-selective channel (VDAC) located in the outer mitochondrial membrane.
    Ann N Y Acad Sci. 1980;341:552-63 PMID: 6249159
  4. Molecular cloning and sequencing of cDNA for yeast porin, an outer mitochondrial membrane protein: a search for targeting signal in the primary structure.
    EMBO J. 1985 Mar;4(3):769-74 PMID: 2408884
  5. Purification and characterisation of a pore protein of the outer mitochondrial membrane from Neurospora crassa.
    Eur J Biochem. 1982 Apr;123(3):629-36 PMID: 6210532
  6. Import of proteins into mitochondria. In vitro studies on the biogenesis of the outer membrane.
    J Biol Chem. 1983 Mar 25;258(6):3427-30 PMID: 6339485
  7. Structural and functional evidence for multiple channel complexes in the outer membrane of Neurospora crassa mitochondria.
    Proc Natl Acad Sci U S A. 1983 Apr;80(8):2243-7 PMID: 6300902
  8. Rapid and sensitive protein similarity searches.
    Science. 1985 Mar 22;227(4693):1435-41 PMID: 2983426
  9. Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins.
    J Mol Biol. 1978 Mar 25;120(1):97-120 PMID: 642007
  10. Purification of a protein having pore forming activity from the rat liver mitochondrial outer membrane.
    Biochem J. 1982 Oct 15;208(1):77-82 PMID: 6297464
  11. Purification of VDAC (voltage-dependent anion-selective channel) from rat liver mitochondria.
    J Membr Biol. 1983;74(2):115-21 PMID: 6308259
  12. The uncoupling protein from brown fat mitochondria is related to the mitochondrial ADP/ATP carrier. Analysis of sequence homologies and of folding of the protein in the membrane.
    EMBO J. 1985 Sep;4(9):2369-76 PMID: 3000775
  13. Amino acid side-chain partition energies and distribution of residues in soluble proteins.
    Biophys J. 1985 Jan;47(1):61-70 PMID: 3978191
  14. A candidate for the permeability pathway of the outer mitochondrial membrane.
    Nature. 1979 Jun 14;279(5714):643-5 PMID: 450112
  15. Molecular model of the action potential sodium channel.
    Proc Natl Acad Sci U S A. 1986 Jan;83(2):508-12 PMID: 2417247
  16. A chemically synthesized pre-sequence of an imported mitochondrial protein can form an amphiphilic helix and perturb natural and artificial phospholipid bilayers.
    EMBO J. 1986 Jun;5(6):1327-34 PMID: 3015598
  17. One-step gene disruption in yeast.
    Methods Enzymol. 1983;101:202-11 PMID: 6310324
  18. Ultrastructure of a periodic protein layer in the outer membrane of Escherichia coli.
    J Cell Biol. 1977 Feb;72(2):292-301 PMID: 319099
  19. Mitochondrial targeting sequences may form amphiphilic helices.
    EMBO J. 1986 Jun;5(6):1335-42 PMID: 3015599
  20. In vitro synthesis and integration into mitochondria of porin, a major protein of the outer mitochondrial membrane of Saccharomyces cerevisiae.
    Proc Natl Acad Sci U S A. 1982 Dec;79(23):7102-6 PMID: 6296816
  21. A structural model of the acetylcholine receptor channel based on partition energy and helix packing calculations.
    Biophys J. 1984 Jan;45(1):249-61 PMID: 6324907
  22. Sequences required for delivery and localization of the ADP/ATP translocator to the mitochondrial inner membrane.
    Mol Cell Biol. 1986 Feb;6(2):626-34 PMID: 3023860
  23. Identification and characterization of the pore-forming protein in the outer membrane of rat liver mitochondria.
    Biochim Biophys Acta. 1982 Apr 7;686(2):204-14 PMID: 7082663
  24. Porin from bacterial and mitochondrial outer membranes.
    CRC Crit Rev Biochem. 1985;19(2):145-90 PMID: 2415299
Article Info
Journal
Journal of bioenergetics and biomembranes
Abbr.
J Bioenerg Biomembr
ISSN
0145-479X
Published
1987-08-00
Pages
341-50
Language
English
Region
United States
NLM ID
7701859
Subset
IM
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