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PMID: 2418438 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

RecA protein filaments can juxtapose DNA ends: an activity that may reflect a function in DNA repair.

Register JC, Griffith J

Abstract

To further characterize the role of RecA protein-DNA filaments in general recombination and DNA repair, we have examined interactions of these filaments with themselves following formation. When linear double-stranded DNA was incubated with RecA in the presence of Mg2+ and adenosine 5'-[gamma-thio]triphosphate, monomer-length (1n) nucleoprotein filaments were observed. Following continued incubation, filaments having 2n, 3n, ... lengths were observed, indicating that an end-to-end joining of the monomer-length filaments had occurred. When linear single-stranded DNA was covered by RecA protein under several conditions, the ends of the resulting filaments joined together rapidly, producing circular filaments. The end-to-end joining of single-stranded DNA-RecA filaments appeared to require that 3' DNA ends be juxtaposed with 5' DNA ends, because double-stranded DNA molecules having long single-stranded DNA tails with only 3' or 5' termini did not join end-to-end. However, when both 5' and 3' ends were present in the reaction, joining was observed. We suggest that this end-to-end joining activity may help explain the role of RecA protein in both the protection of damaged DNA ends and the repair of double-stranded DNA breaks.

MeSH Terms
DNA Repair DNA, Bacterial/metabolism DNA, Single-Stranded/metabolism Escherichia coli/physiology Microscopy, Electron RNA/metabolism Rec A Recombinases/metabolism
Chemicals
DNA, Bacterial DNA, Single-Stranded RNA Rec A Recombinases
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Register J C
Griffith J
References (36)
36 references, click to expand
  1. Characteristics of some multiply recombination-deficient strains of Escherichia coli.
    J Bacteriol. 1969 Oct;100(1):231-9 PMID: 4898990
  2. Isolation of altered recA polypeptides and interaction with ATP and DNA.
    J Biol Chem. 1985 Jan 25;260(2):949-55 PMID: 3881430
  3. EcoRI endonuclease. Physical and catalytic properties of the homogenous enzyme.
    J Biol Chem. 1976 Oct 10;251(19):5866-74 PMID: 786985
  4. Repair of DNA double-strand breaks in Escherichia coli, which requires recA function and the presence of a duplicate genome.
    J Mol Biol. 1977 Oct 15;116(1):81-98 PMID: 338918
  5. Electron microscope visualization of chromatin and other DNA-protein complexes.
    Annu Rev Biophys Bioeng. 1978;7:19-35 PMID: 78683
  6. Degradation of Escherichia coli DNA: evidence for limitation in vivo by protein X, the recA gene product.
    Mol Gen Genet. 1979 Jan 5;168(1):69-80 PMID: 372741
  7. E. coli recA protein-directed cleavage of phage lambda repressor requires polynucleotide.
    Nature. 1980 Jan 3;283(5742):26-30 PMID: 6444245
  8. Exonuclease III of Escherichia coli K-12, an AP endonuclease.
    Methods Enzymol. 1980;65(1):201-11 PMID: 6246343
  9. Amplification of single-strand DNA binding protein in Escherichia coli.
    Nucleic Acids Res. 1980 Jul 25;8(14):3215-27 PMID: 6449689
  10. Escherichia coli recA protein protects single-stranded DNA or gapped duplex DNA from degradation by RecBC DNase.
    J Biol Chem. 1981 Jul 25;256(14):7573-82 PMID: 6265452
  11. Binding of the recA protein of Escherichia coli to single- and double-stranded DNA.
    J Biol Chem. 1981 Aug 25;256(16):8835-44 PMID: 7021553
  12. recA protein of Escherichia coli promotes branch migration, a kinetically distinct phase of DNA strand exchange.
    Proc Natl Acad Sci U S A. 1981 Jun;78(6):3433-7 PMID: 7022448
  13. Visualization of SSB-ssDNA complexes active in the assembly of stable RecA-DNA filaments.
    Cold Spring Harb Symp Quant Biol. 1984;49:553-9 PMID: 6397310
  14. Molecular mechanisms of general genetic recombination: the DNA-binding sites of RecA protein.
    Cold Spring Harb Symp Quant Biol. 1984;49:571-80 PMID: 6397312
  15. The uvsX protein of bacteriophage T4 arranges single-stranded and double-stranded DNA into similar helical nucleoprotein filaments.
    J Biol Chem. 1985 Apr 10;260(7):4484-91 PMID: 3156858
  16. RecA protein rapidly crystallizes in the presence of spermidine: a valuable step in its purification and physical characterization.
    Biochemistry. 1985 Jan 1;24(1):158-62 PMID: 3888255
  17. Light scattering studies of the recA protein of Escherichia coli: relationship between free recA filaments and the recA X ssDNA complex.
    Biochemistry. 1985 Jan 29;24(3):760-7 PMID: 3888263
  18. Hexamine cobalt chloride promotes intermolecular ligation of blunt end DNA fragments by T4 DNA ligase.
    Nucleic Acids Res. 1985 Mar 25;13(6):1997-2008 PMID: 4000951
  19. 10 nm RecA protein filaments formed in the presence of Mg2+ and ATP gamma S may contain RNA.
    Mol Gen Genet. 1985;199(3):415-20 PMID: 2412090
  20. The direction of RecA protein assembly onto single strand DNA is the same as the direction of strand assimilation during strand exchange.
    J Biol Chem. 1985 Oct 5;260(22):12308-12 PMID: 3900072
  21. Repair of DNA double-strand breaks in Escherichia coli cells requires synthesis of proteins that can be induced by UV light.
    Proc Natl Acad Sci U S A. 1981 Jun;78(6):3450-3 PMID: 7022449
  22. Effect of recA protein on the DNAse activities of the recBC enzyme.
    J Biol Chem. 1981 Oct 25;256(20):10415-9 PMID: 7026559
  23. RecA protein-dependent proteolysis of bacteriophage lambda repressor Characterization of the reaction and stimulation by DNA-binding proteins.
    J Biol Chem. 1981 Nov 10;256(21):10883-8 PMID: 6457045
  24. Elongation of duplex DNA by recA protein.
    J Mol Biol. 1981 Sep 25;151(3):557-64 PMID: 7040675
  25. Visualization of recA protein and its association with DNA: a priming effect of single-strand-binding protein.
    Cell. 1982 Apr;28(4):747-56 PMID: 6212122
  26. Electron microscopic visualization of recA-DNA filaments: evidence for a cyclic extension of duplex DNA.
    Cell. 1982 Apr;28(4):757-65 PMID: 7046950
  27. The helicity of DNA in complexes with recA protein.
    Nature. 1982 Sep 9;299(5879):185-6 PMID: 7050731
  28. Homologous pairing and strand exchange in genetic recombination.
    Annu Rev Genet. 1982;16:405-37 PMID: 6297377
  29. Patterns of integration of DNA microinjected into cultured mammalian cells: evidence for homologous recombination between injected plasmid DNA molecules.
    Mol Cell Biol. 1982 Nov;2(11):1372-87 PMID: 6298598
  30. Macromolecular crowding allows blunt-end ligation by DNA ligases from rat liver or Escherichia coli.
    Proc Natl Acad Sci U S A. 1983 Oct;80(19):5852-6 PMID: 6351067
  31. The structure of recA protein-DNA filaments. 2 recA protein monomers unwind 17 base pairs of DNA by 11.5 degrees/base pair in the presence of adenosine 5'-O-(3-thiotriphosphate).
    J Biol Chem. 1983 Oct 25;258(20):12624-31 PMID: 6313668
  32. DNA binding protein from ovaries of the frog, Xenopus laevis which promotes concatenation of linear DNA.
    J Mol Biol. 1984 Jan 5;172(1):87-108 PMID: 6537981
  33. Duplex-duplex interactions catalyzed by RecA protein allow strand exchanges to pass double-strand breaks in DNA.
    Cell. 1984 Jun;37(2):683-91 PMID: 6327083
  34. Repair of DNA double-strand breaks in Escherichia coli K12 requires a functional recN product.
    Mol Gen Genet. 1984;195(1-2):267-74 PMID: 6092851
  35. Isolation and visualization of active presynaptic filaments of recA protein and single-stranded DNA.
    Proc Natl Acad Sci U S A. 1984 Nov;81(22):7026-30 PMID: 6594678
  36. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.
    Anal Biochem. 1976 May 7;72:248-54 PMID: 942051
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1986-02-00
Pages
624-8
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC322916
Subset
IM
Grants
NCI NIH HHS · CA16086 · United States
NIGMS NIH HHS · GM31819 · United States
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