Home LiteratureArticle Details
PMID: 23793099 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

BCAT1 promotes cell proliferation through amino acid catabolism in gliomas carrying wild-type IDH1.

Nature medicine ·Vol. 19 ·No. 7 ·2013-07-00 ·Pages 901-908

Tönjes M, Barbus S, Park YJ, Wang W, Schlotter M, Lindroth AM, Pleier SV, Bai AHC, Karra D, Piro RM, Felsberg J, Addington A, Lemke D, Weibrecht I, Hovestadt V, Rolli CG, Campos B, Turcan S, Sturm D, Witt H, Chan TA, Herold-Mende C, Kemkemer R, König R, Schmidt K, Hull WE, Pfister SM, Jugold M, Hutson SM, Plass C, Okun JG, Reifenberger G, Lichter P, Radlwimmer B

Abstract

Here we show that glioblastoma express high levels of branched-chain amino acid transaminase 1 (BCAT1), the enzyme that initiates the catabolism of branched-chain amino acids (BCAAs). Expression of BCAT1 was exclusive to tumors carrying wild-type isocitrate dehydrogenase 1 (IDH1) and IDH2 genes and was highly correlated with methylation patterns in the BCAT1 promoter region. BCAT1 expression was dependent on the concentration of α-ketoglutarate substrate in glioma cell lines and could be suppressed by ectopic overexpression of mutant IDH1 in immortalized human astrocytes, providing a link between IDH1 function and BCAT1 expression. Suppression of BCAT1 in glioma cell lines blocked the excretion of glutamate and led to reduced proliferation and invasiveness in vitro, as well as significant decreases in tumor growth in a glioblastoma xenograft model. These findings suggest a central role for BCAT1 in glioma pathogenesis, making BCAT1 and BCAA metabolism attractive targets for the development of targeted therapeutic approaches to treat patients with glioblastoma.

MeSH Terms
Amino Acids, Branched-Chain/metabolism Animals Brain Neoplasms/genetics,metabolism,pathology Cell Line, Tumor Cell Proliferation Female Glioma/genetics,metabolism,pathology HEK293 Cells Humans Isocitrate Dehydrogenase/genetics,physiology Metabolism/genetics Mice Mice, Nude Models, Biological Transaminases/genetics,metabolism,physiology
Chemicals
Amino Acids, Branched-Chain Isocitrate Dehydrogenase IDH1 protein, human BCAT1 protein, human Transaminases
Authors & Affiliations
34 authors, click to expand affiliations / ORCID
Tönjes Martje
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Barbus Sebastian
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Park Yoon Jung
Division of Epigenomics and Cancer Risk Factors, DKFZ, Heidelberg, Germany. | Department of Nutritional Science and Food Management, College of Health Science, Ewha Womans University, Seoul, South Korea.
Wang Wei
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Schlotter Magdalena
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Lindroth Anders M
Division of Epigenomics and Cancer Risk Factors, DKFZ, Heidelberg, Germany.
Pleier Sabrina V
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany. | Division of Pediatric Neurooncology, DKFZ, Heidelberg, Germany.
Bai Alfa H C
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Karra Daniela
Department of Neuropathology, Heinrich Heine University, Düsseldorf, Germany.
Piro Rosario M
Department of Bioinformatics and Functional Genomics, Institute of Pharmacy and Molecular Biotechnology and Bioquant, University of Heidelberg, Heidelberg, Germany. | Division of Theoretical Bioinformatics, DKFZ, Heidelberg, Germany.
Felsberg Jörg
Department of Neuropathology, Heinrich Heine University, Düsseldorf, Germany.
Addington Adele
Department of Human Nutrition, Foods and Exercise, Virginia Polytechnic Institute, Blacksburg, Virginia, USA.
Lemke Dieter
Clinical Cooperation Unit Neurooncology, DKFZ, Heidelberg, Germany.
Weibrecht Irene
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Hovestadt Volker
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Rolli Claudio G
Department of New Materials and Biosystems, Max Planck Institute for Intelligent Systems, Stuttgart, Germany.
Campos Benito
Division of Experimental Neurosurgery, University of Heidelberg, Heidelberg, Germany. | Department of Neurosurgery, University of Heidelberg, Heidelberg, Germany.
Turcan Sevin
Human Oncology and Pathogenesis Program, Memorial Sloan-Kettering Cancer Center, New York, New York, USA.
Sturm Dominik
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany. | Division of Pediatric Neurooncology, DKFZ, Heidelberg, Germany. | Department of Pediatric Oncology, Hematology and Immunology, Heidelberg University Hospital, Heidelberg, Germany.
Witt Hendrik
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany. | Division of Pediatric Neurooncology, DKFZ, Heidelberg, Germany. | Department of Pediatric Oncology, Hematology and Immunology, Heidelberg University Hospital, Heidelberg, Germany.
Chan Timothy A
Human Oncology and Pathogenesis Program, Memorial Sloan-Kettering Cancer Center, New York, New York, USA.
Herold-Mende Christel
Division of Experimental Neurosurgery, University of Heidelberg, Heidelberg, Germany. | Department of Neurosurgery, University of Heidelberg, Heidelberg, Germany.
Kemkemer Ralf
Department of New Materials and Biosystems, Max Planck Institute for Intelligent Systems, Stuttgart, Germany. | Reutlingen University of Applied Science, Reutlingen, Germany.
König Rainer
Department of Bioinformatics and Functional Genomics, Institute of Pharmacy and Molecular Biotechnology and Bioquant, University of Heidelberg, Heidelberg, Germany. | Division of Theoretical Bioinformatics, DKFZ, Heidelberg, Germany.
Schmidt Kathrin
Department of General Pediatrics, Division of Inborn Metabolic Diseases, University Children's Hospital, Heidelberg, Germany.
Hull William-Edmund
Core Facility, Molecular Structural Analysis, DKFZ, Heidelberg, Germany.
Pfister Stefan M
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany. | Division of Pediatric Neurooncology, DKFZ, Heidelberg, Germany. | Department of Pediatric Oncology, Hematology and Immunology, Heidelberg University Hospital, Heidelberg, Germany.
Jugold Manfred
Core Facility, Small Animal Imaging Center, DKFZ, Heidelberg, Germany.
Hutson Susan M
Department of Human Nutrition, Foods and Exercise, Virginia Polytechnic Institute, Blacksburg, Virginia, USA.
Plass Christoph
Division of Epigenomics and Cancer Risk Factors, DKFZ, Heidelberg, Germany.
Okun Jürgen G
Department of General Pediatrics, Division of Inborn Metabolic Diseases, University Children's Hospital, Heidelberg, Germany.
Reifenberger Guido
Department of Neuropathology, Heinrich Heine University, Düsseldorf, Germany. | German Cancer Consortium (DKTK), DKFZ, Heidelberg, Germany.
Lichter Peter
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Radlwimmer Bernhard
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
References (70)
70 references, click to expand
  1. Glioblastoma cells require glutamate dehydrogenase to survive impairments of glucose metabolism or Akt signaling.
    Cancer Res. 2009 Oct 15;69(20):7986-93 PMID: 19826036
  2. Glutamate release by primary brain tumors induces epileptic activity.
    Nat Med. 2011 Sep 11;17(10):1269-74 PMID: 21909104
  3. Beyond aerobic glycolysis: transformed cells can engage in glutamine metabolism that exceeds the requirement for protein and nucleotide synthesis.
    Proc Natl Acad Sci U S A. 2007 Dec 4;104(49):19345-50 PMID: 18032601
  4. An integrated genomic analysis of human glioblastoma multiforme.
    Science. 2008 Sep 26;321(5897):1807-12 PMID: 18772396
  5. Analysis of the IDH1 codon 132 mutation in brain tumors.
    Acta Neuropathol. 2008 Dec;116(6):597-602 PMID: 18985363
  6. Hotspot mutations in H3F3A and IDH1 define distinct epigenetic and biological subgroups of glioblastoma.
    Cancer Cell. 2012 Oct 16;22(4):425-37 PMID: 23079654
  7. Inhibition of glutaminase preferentially slows growth of glioma cells with mutant IDH1.
    Cancer Res. 2010 Nov 15;70(22):8981-7 PMID: 21045145
  8. A multigene predictor of outcome in glioblastoma.
    Neuro Oncol. 2010 Jan;12(1):49-57 PMID: 20150367
  9. Disruption of BCATm in mice leads to increased energy expenditure associated with the activation of a futile protein turnover cycle.
    Cell Metab. 2007 Sep;6(3):181-94 PMID: 17767905
  10. Type and frequency of IDH1 and IDH2 mutations are related to astrocytic and oligodendroglial differentiation and age: a study of 1,010 diffuse gliomas.
    Acta Neuropathol. 2009 Oct;118(4):469-74 PMID: 19554337
  11. Q's next: the diverse functions of glutamine in metabolism, cell biology and cancer.
    Oncogene. 2010 Jan 21;29(3):313-24 PMID: 19881548
  12. Profiling the effects of isocitrate dehydrogenase 1 and 2 mutations on the cellular metabolome.
    Proc Natl Acad Sci U S A. 2011 Feb 22;108(8):3270-5 PMID: 21289278
  13. Metabolite profiling identifies a key role for glycine in rapid cancer cell proliferation.
    Science. 2012 May 25;336(6084):1040-4 PMID: 22628656
  14. Leucine aminotransferase. II. Purification and characterization.
    J Biol Chem. 1966 Oct 10;241(19):4396-405 PMID: 5922965
  15. Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1.
    Cancer Cell. 2010 Jan 19;17(1):98-110 PMID: 20129251
  16. ECA39 is a novel distant metastasis-related biomarker in colorectal cancer.
    World J Gastroenterol. 2006 Sep 28;12(36):5884-9 PMID: 17007058
  17. Identification of a CpG island methylator phenotype that defines a distinct subgroup of glioma.
    Cancer Cell. 2010 May 18;17(5):510-22 PMID: 20399149
  18. Reductive glutamine metabolism by IDH1 mediates lipogenesis under hypoxia.
    Nature. 2011 Nov 20;481(7381):380-4 PMID: 22101433
  19. Identification of amplified genes from SV40 large T antigen-induced rat PNET cell lines by subtractive cDNA analysis and radiation hybrid mapping.
    Oncogene. 2001 Apr 12;20(16):2023-31 PMID: 11360186
  20. Simultaneous extraction of nucleic acids and proteins from tissue specimens by ultracentrifugation: A protocol using the high-salt protein fraction for quantitative proteome analysis.
    Proteomics. 2009 Nov;9(21):4985-90 PMID: 19810030
  21. Nutrition needs of mammalian cells in tissue culture.
    Science. 1955 Sep 16;122(3168):501-14 PMID: 13255879
  22. Intracerebral accumulation of glutaric and 3-hydroxyglutaric acids secondary to limited flux across the blood-brain barrier constitute a biochemical risk factor for neurodegeneration in glutaryl-CoA dehydrogenase deficiency.
    J Neurochem. 2006 May;97(3):899-910 PMID: 16573641
  23. Monoclonal antibody specific for IDH1 R132H mutation.
    Acta Neuropathol. 2009 Nov;118(5):599-601 PMID: 19798509
  24. Differential expression and prognostic significance of SOX genes in pediatric medulloblastoma and ependymoma identified by microarray analysis.
    Neuro Oncol. 2008 Oct;10(5):648-60 PMID: 18577562
  25. Biochemical findings in common inborn errors of metabolism.
    Am J Med Genet C Semin Med Genet. 2006 May 15;142C(2):64-76 PMID: 16602099
  26. A molecular model of human branched-chain amino acid metabolism.
    Am J Clin Nutr. 1998 Jul;68(1):72-81 PMID: 9665099
  27. Molecular signatures classify astrocytic gliomas by IDH1 mutation status.
    Int J Cancer. 2011 Mar 1;128(5):1095-103 PMID: 20473936
  28. Functional evidence for a nasopharyngeal carcinoma-related gene BCAT1 located at 12p12.
    Oncol Res. 2007;16(9):405-13 PMID: 18074675
  29. Transaminase of branched chain amino acids. I. Branched chain amino acids-alpha-ketoglutarate transaminase.
    J Biochem. 1966 Feb;59(2):160-9 PMID: 5943594
  30. Impact of tumor cell cytoskeleton organization on invasiveness and migration: a microchannel-based approach.
    PLoS One. 2010 Jan 15;5(1):e8726 PMID: 20090950
  31. Intrinsic gene expression profiles of gliomas are a better predictor of survival than histology.
    Cancer Res. 2009 Dec 1;69(23):9065-72 PMID: 19920198
  32. Phosphoglycerate dehydrogenase diverts glycolytic flux and contributes to oncogenesis.
    Nat Genet. 2011 Jul 31;43(9):869-74 PMID: 21804546
  33. A role for glutamate in growth and invasion of primary brain tumors.
    J Neurochem. 2008 Apr;105(2):287-95 PMID: 18284616
  34. Cancer-associated IDH1 mutations produce 2-hydroxyglutarate.
    Nature. 2009 Dec 10;462(7274):739-44 PMID: 19935646
  35. Glioblastoma subclasses can be defined by activity among signal transduction pathways and associated genomic alterations.
    PLoS One. 2009 Nov 13;4(11):e7752 PMID: 19915670
  36. Leukemic IDH1 and IDH2 mutations result in a hypermethylation phenotype, disrupt TET2 function, and impair hematopoietic differentiation.
    Cancer Cell. 2010 Dec 14;18(6):553-67 PMID: 21130701
  37. Structural determinants for branched-chain aminotransferase isozyme-specific inhibition by the anticonvulsant drug gabapentin.
    J Biol Chem. 2005 Nov 4;280(44):37246-56 PMID: 16141215
  38. Isocitrate dehydrogenase 1 and 2 mutations in cancer: alterations at a crossroads of cellular metabolism.
    J Natl Cancer Inst. 2010 Jul 7;102(13):932-41 PMID: 20513808
  39. Isozyme patterns of branched-chain amino acid transaminase in human tissues and tumors.
    Gan. 1977 Oct;68(5):663-7 PMID: 201538
  40. Quantitative high-throughput analysis of DNA methylation patterns by base-specific cleavage and mass spectrometry.
    Proc Natl Acad Sci U S A. 2005 Nov 1;102(44):15785-90 PMID: 16243968
  41. Myc regulates a transcriptional program that stimulates mitochondrial glutaminolysis and leads to glutamine addiction.
    Proc Natl Acad Sci U S A. 2008 Dec 2;105(48):18782-7 PMID: 19033189
  42. Branched-chain [corrected] amino acid metabolism: implications for establishing safe intakes.
    J Nutr. 2005 Jun;135(6 Suppl):1557S-64S PMID: 15930469
  43. PathWave: discovering patterns of differentially regulated enzymes in metabolic pathways.
    Bioinformatics. 2010 May 1;26(9):1225-31 PMID: 20335275
  44. Nitrogen shuttling between neurons and glial cells during glutamate synthesis.
    J Neurochem. 2001 Mar;76(6):1712-23 PMID: 11259489
  45. IDH1 mutation is sufficient to establish the glioma hypermethylator phenotype.
    Nature. 2012 Feb 15;483(7390):479-83 PMID: 22343889
  46. Reductive carboxylation supports growth in tumour cells with defective mitochondria.
    Nature. 2011 Nov 20;481(7381):385-8 PMID: 22101431
  47. IDH1(R132H) mutation increases murine haematopoietic progenitors and alters epigenetics.
    Nature. 2012 Aug 30;488(7413):656-9 PMID: 22763442
  48. Oncometabolite 2-hydroxyglutarate is a competitive inhibitor of α-ketoglutarate-dependent dioxygenases.
    Cancer Cell. 2011 Jan 18;19(1):17-30 PMID: 21251613
  49. D-2-hydroxyglutarate produced by mutant IDH1 perturbs collagen maturation and basement membrane function.
    Genes Dev. 2012 Sep 15;26(18):2038-49 PMID: 22925884
  50. Patients with IDH1 wild type anaplastic astrocytomas exhibit worse prognosis than IDH1-mutated glioblastomas, and IDH1 mutation status accounts for the unfavorable prognostic effect of higher age: implications for classification of gliomas.
    Acta Neuropathol. 2010 Dec;120(6):707-18 PMID: 21088844
  51. Branched-chain amino acid catabolism: unique segregation of pathway enzymes in organ systems and peripheral nerves.
    Am J Physiol Endocrinol Metab. 2004 Jan;286(1):E64-76 PMID: 12965870
  52. Otto Warburg's contributions to current concepts of cancer metabolism.
    Nat Rev Cancer. 2011 May;11(5):325-37 PMID: 21508971
  53. Differentiation therapy exerts antitumor effects on stem-like glioma cells.
    Clin Cancer Res. 2010 May 15;16(10):2715-28 PMID: 20442299
  54. Single-vector inducible lentiviral RNAi system for oncology target validation.
    Cell Cycle. 2009 Feb 1;8(3):498-504 PMID: 19177017
  55. Role of branched-chain aminotransferase isoenzymes and gabapentin in neurotransmitter metabolism.
    J Neurochem. 1998 Aug;71(2):863-74 PMID: 9681479
  56. Glioma-derived mutations in IDH1 dominantly inhibit IDH1 catalytic activity and induce HIF-1alpha.
    Science. 2009 Apr 10;324(5924):261-5 PMID: 19359588
  57. Functional genomics reveal that the serine synthesis pathway is essential in breast cancer.
    Nature. 2011 Aug 18;476(7360):346-50 PMID: 21760589
  58. Widespread neuronal expression of branched-chain aminotransferase in the CNS: implications for leucine/glutamate metabolism and for signaling by amino acids.
    J Neurochem. 2007 Mar;100(6):1458-68 PMID: 17348860
  59. IDH1 and IDH2 mutations in gliomas.
    N Engl J Med. 2009 Feb 19;360(8):765-73 PMID: 19228619
  60. Hypoxia promotes isocitrate dehydrogenase-dependent carboxylation of α-ketoglutarate to citrate to support cell growth and viability.
    Proc Natl Acad Sci U S A. 2011 Dec 6;108(49):19611-6 PMID: 22106302
  61. IDH1 mutations are present in the majority of common adult gliomas but rare in primary glioblastomas.
    Neuro Oncol. 2009 Aug;11(4):341-7 PMID: 19435942
  62. Overexpression and characterization of the human mitochondrial and cytosolic branched-chain aminotransferases.
    J Biol Chem. 1998 Feb 27;273(9):4982-9 PMID: 9478945
  63. The binding of detergents to lipophilic and hydrophilic proteins.
    J Biol Chem. 1972 Jun 10;247(11):3656-61 PMID: 4113126
  64. IDH mutations in glioma and acute myeloid leukemia.
    Trends Mol Med. 2010 Sep;16(9):387-97 PMID: 20692206
  65. Determination of metabolite and nucleotide concentrations in proliferating lymphocytes by 1H-NMR of acid extracts.
    Biochim Biophys Acta. 1990 Sep 1;1054(2):181-97 PMID: 2119233
  66. IDH mutation impairs histone demethylation and results in a block to cell differentiation.
    Nature. 2012 Feb 15;483(7390):474-8 PMID: 22343901
  67. Protein measurement with the Folin phenol reagent.
    J Biol Chem. 1951 Nov;193(1):265-75 PMID: 14907713
  68. MicroRNA-182 promotes leptomeningeal spread of non-sonic hedgehog-medulloblastoma.
    Acta Neuropathol. 2012 Apr;123(4):529-38 PMID: 22134538
  69. The case for regulating indispensable amino acid metabolism: the branched-chain alpha-keto acid dehydrogenase kinase-knockout mouse.
    Biochem J. 2006 Nov 15;400(1):e1-3 PMID: 17061958
  70. Branched chain aminotransferase isoenzymes. Purification and characterization of the rat brain isoenzyme.
    J Biol Chem. 1993 Feb 15;268(5):3092-8 PMID: 8381418
Article Info
Journal
Nature medicine
Abbr.
Nat Med
ISSN
1546-170X
Published
2013-07-00
Epub
2013-00-23
Pages
901-908
Language
English
Region
United States
NLM ID
9502015
PMCID
PMC4916649
Subset
IM
Grants
NCI NIH HHS · T32 CA160001 · United States
Corrections
CommentIn
CommentIn
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com