-
Global chromatin architecture reflects pluripotency and lineage commitment in the early mouse embryo.
PLoS One. 2010 May 07;5(5):e10531
PMID: 20479880
-
Radial arrangement of chromosome territories in human cell nuclei: a computer model approach based on gene density indicates a probabilistic global positioning code.
Biophys J. 2004 May;86(5):2803-12
PMID: 15111398
-
Polycomb group proteins: repression in 3D.
Trends Genet. 2011 Nov;27(11):454-64
PMID: 21794944
-
Critical DNA binding interactions of the insulator protein CTCF: a small number of zinc fingers mediate strong binding, and a single finger-DNA interaction controls binding at imprinted loci.
J Biol Chem. 2007 Nov 16;282(46):33336-33345
PMID: 17827499
-
Folding and organization of a contiguous chromosome region according to the gene distribution pattern in primary genomic sequence.
J Cell Biol. 2006 Jul 3;174(1):27-38
PMID: 16818717
-
Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions.
Nat Rev Genet. 2007 Feb;8(2):104-15
PMID: 17230197
-
Transcription factories and nuclear organization of the genome.
Cold Spring Harb Symp Quant Biol. 2010;75:501-6
PMID: 21467135
-
Topological domains in mammalian genomes identified by analysis of chromatin interactions.
Nature. 2012 Apr 11;485(7398):376-80
PMID: 22495300
-
Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription.
Genes Dev. 2004 May 15;18(10):1119-30
PMID: 15155579
-
Subchromosomal positioning of the epidermal differentiation complex (EDC) in keratinocyte and lymphoblast interphase nuclei.
Exp Cell Res. 2002 Jan 15;272(2):163-75
PMID: 11777341
-
The fractal globule as a model of chromatin architecture in the cell.
Chromosome Res. 2011 Jan;19(1):37-51
PMID: 21274616
-
Chromatin domains and the interchromatin compartment form structurally defined and functionally interacting nuclear networks.
Chromosome Res. 2006;14(7):707-33
PMID: 17115328
-
Role of the nuclear lamina in genome organization and gene expression.
Cold Spring Harb Symp Quant Biol. 2010;75:517-24
PMID: 21209388
-
Comprehensive mapping of long-range interactions reveals folding principles of the human genome.
Science. 2009 Oct 9;326(5950):289-93
PMID: 19815776
-
Thermodynamic pathways to genome spatial organization in the cell nucleus.
Biophys J. 2009 Mar 18;96(6):2168-77
PMID: 19289043
-
Evidence for the organization of chromatin in megabase pair-sized loops arranged along a random walk path in the human G0/G1 interphase nucleus.
J Cell Biol. 1995 Sep;130(6):1239-49
PMID: 7559748
-
Chromatin higher-order structure and dynamics.
Cold Spring Harb Perspect Biol. 2010 May;2(5):a000596
PMID: 20452954
-
Diffusion-driven looping provides a consistent framework for chromatin organization.
PLoS One. 2010 Aug 25;5(8):e12218
PMID: 20811620
-
[The role of topological limitations in the kinetics of homopolymer collapse and self-assembly of biopolymers].
Biofizika. 1988 Mar-Apr;33(2):247-53
PMID: 3390477
-
Large-scale chromatin organization of the major histocompatibility complex and other regions of human chromosome 6 and its response to interferon in interphase nuclei.
J Cell Sci. 2000 May;113 ( Pt 9):1565-76
PMID: 10751148
-
Compartmentalization of interphase chromosomes observed in simulation and experiment.
J Mol Biol. 1999 Jan 22;285(3):1053-65
PMID: 9887267
-
Random loop model for long polymers.
Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Nov;76(5 Pt 1):051805
PMID: 18233679
-
Spatially confined folding of chromatin in the interphase nucleus.
Proc Natl Acad Sci U S A. 2009 Mar 10;106(10):3812-7
PMID: 19234129
-
Chromosome territories, nuclear architecture and gene regulation in mammalian cells.
Nat Rev Genet. 2001 Apr;2(4):292-301
PMID: 11283701
-
Spatial partitioning of the regulatory landscape of the X-inactivation centre.
Nature. 2012 Apr 11;485(7398):381-5
PMID: 22495304
-
A random-walk/giant-loop model for interphase chromosomes.
Proc Natl Acad Sci U S A. 1995 Mar 28;92(7):2710-4
PMID: 7708711
-
Genome architectures revealed by tethered chromosome conformation capture and population-based modeling.
Nat Biotechnol. 2011 Dec 25;30(1):90-8
PMID: 22198700
-
Intermingling of chromosome territories in interphase suggests role in translocations and transcription-dependent associations.
PLoS Biol. 2006 May;4(5):e138
PMID: 16623600
-
A thermodynamic switch for chromosome colocalization.
Genetics. 2008 May;179(1):717-21
PMID: 18493085
-
The organization of replication and transcription.
Science. 1999 Jun 11;284(5421):1790-5
PMID: 10364545
-
Beyond the sequence: cellular organization of genome function.
Cell. 2007 Feb 23;128(4):787-800
PMID: 17320514
-
Regional specialization in human nuclei: visualization of discrete sites of transcription by RNA polymerase III.
EMBO J. 1999 Apr 15;18(8):2241-53
PMID: 10205177
-
Hotspots of transcription factor colocalization in the genome of Drosophila melanogaster.
Proc Natl Acad Sci U S A. 2006 Aug 8;103(32):12027-32
PMID: 16880385
-
Packing of the polynucleosome chain in interphase chromosomes: evidence for a contribution of crowding and entropic forces.
Semin Cell Dev Biol. 2007 Oct;18(5):668-75
PMID: 17904880
-
The 3D structure of the immunoglobulin heavy-chain locus: implications for long-range genomic interactions.
Cell. 2008 Apr 18;133(2):265-79
PMID: 18423198
-
Three-dimensional folding and functional organization principles of the Drosophila genome.
Cell. 2012 Feb 3;148(3):458-72
PMID: 22265598