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PMID: 22916005 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, U.S. Gov't, Non-P.H.S.

Assessing the relative stability of dimer interfaces in g protein-coupled receptors.

PLoS computational biology ·Vol. 8 ·No. 8 ·2012-00-00 ·Pages e1002649

Johnston JM, Wang H, Provasi D, Filizola M

Abstract

Considerable evidence has accumulated in recent years suggesting that G protein-coupled receptors (GPCRs) associate in the plasma membrane to form homo- and/or heteromers. Nevertheless, the stoichiometry, fraction and lifetime of such receptor complexes in living cells remain topics of intense debate. Motivated by experimental data suggesting differing stabilities for homomers of the cognate human β1- and β2-adrenergic receptors, we have carried out approximately 160 microseconds of biased molecular dynamics simulations to calculate the dimerization free energy of crystal structure-based models of these receptors, interacting at two interfaces that have often been implicated in GPCR association under physiological conditions. Specifically, results are presented for simulations of coarse-grained (MARTINI-based) and atomistic representations of each receptor, in homodimeric configurations with either transmembrane helices TM1/H8 or TM4/3 at the interface, in an explicit lipid bilayer. Our results support a definite contribution to the relative stability of GPCR dimers from both interface sequence and configuration. We conclude that β1- and β2-adrenergic receptor homodimers with TM1/H8 at the interface are more stable than those involving TM4/3, and that this might be reconciled with experimental studies by considering a model of oligomerization in which more stable TM1 homodimers diffuse through the membrane, transiently interacting with other protomers at interfaces involving other TM helices.

MeSH Terms
Dimerization Humans Lipid Bilayers Molecular Dynamics Simulation Molecular Structure Receptors, G-Protein-Coupled/chemistry
Chemicals
Lipid Bilayers Receptors, G-Protein-Coupled
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Johnston Jennifer M
Department of Structural and Chemical Biology, Mount Sinai School of Medicine, New York, New York, United States of America.
Wang Hao
Provasi Davide
Filizola Marta
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Article Info
Journal
PLoS computational biology
Abbr.
PLoS Comput Biol
ISSN
1553-7358
Published
2012-00-00
Epub
2012-00-16
Pages
e1002649
Language
English
Region
United States
NLM ID
101238922
PMCID
PMC3420924
Subset
IM
Grants
NIMH NIH HHS · R21 MH091360 · United States
NIMH NIH HHS · MH091360 · United States
NIDA NIH HHS · R01 DA020032 · United States
NIDA NIH HHS · DA026434 · United States
NIDA NIH HHS · K02 DA026434 · United States
NIDA NIH HHS · DA020032 · United States
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