-
"Mini-mental state". A practical method for grading the cognitive state of patients for the clinician.
J Psychiatr Res. 1975 Nov;12(3):189-98
PMID: 1202204
-
The fecal microbiota of irritable bowel syndrome patients differs significantly from that of healthy subjects.
Gastroenterology. 2007 Jul;133(1):24-33
PMID: 17631127
-
Homeostasis and inflammation in the intestine.
Cell. 2010 Mar 19;140(6):859-70
PMID: 20303876
-
An irritable bowel syndrome subtype defined by species-specific alterations in faecal microbiota.
Gut. 2012 Jul;61(7):997-1006
PMID: 22180058
-
The inflammatory status of old age can be nurtured from the intestinal environment.
Curr Opin Clin Nutr Metab Care. 2008 Jan;11(1):13-20
PMID: 18090652
-
High-fat diet determines the composition of the murine gut microbiome independently of obesity.
Gastroenterology. 2009 Nov;137(5):1716-24.e1-2
PMID: 19706296
-
Human nutrition, the gut microbiome and the immune system.
Nature. 2011 Jun 15;474(7351):327-36
PMID: 21677749
-
The microbiology of butyrate formation in the human colon.
FEMS Microbiol Lett. 2002 Dec 17;217(2):133-9
PMID: 12480096
-
QIIME allows analysis of high-throughput community sequencing data.
Nat Methods. 2010 May;7(5):335-6
PMID: 20383131
-
Inflamm-aging. An evolutionary perspective on immunosenescence.
Ann N Y Acad Sci. 2000 Jun;908:244-54
PMID: 10911963
-
Dietary intake patterns are reflected in metabolomic profiles: potential role in dietary assessment studies.
Am J Clin Nutr. 2011 Feb;93(2):314-21
PMID: 21177801
-
Through ageing, and beyond: gut microbiota and inflammatory status in seniors and centenarians.
PLoS One. 2010 May 17;5(5):e10667
PMID: 20498852
-
The Mini Nutritional Assessment--its history, today's practice, and future perspectives.
Nutr Clin Pract. 2008 Aug-Sep;23(4):388-96
PMID: 18682590
-
FUNCTIONAL EVALUATION: THE BARTHEL INDEX.
Md State Med J. 1965 Feb;14:61-5
PMID: 14258950
-
Associations between dietary habits and body mass index with gut microbiota composition and fecal water genotoxicity: an observational study in African American and Caucasian American volunteers.
Nutr J. 2009 Oct 21;8:49
PMID: 19845958
-
The Functional Independence Measure: a comparative validity and reliability study.
Disabil Rehabil. 1995 Jan;17(1):10-4
PMID: 7858276
-
Wild bootstrap for quantile regression.
Biometrika. 2011 Dec;98(4):995-999
PMID: 23049133
-
How to measure comorbidity. a critical review of available methods.
J Clin Epidemiol. 2003 Mar;56(3):221-9
PMID: 12725876
-
A human gut microbial gene catalogue established by metagenomic sequencing.
Nature. 2010 Mar 4;464(7285):59-65
PMID: 20203603
-
Probabilistic principal component analysis for metabolomic data.
BMC Bioinformatics. 2010 Nov 23;11:571
PMID: 21092268
-
Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans.
Science. 2011 May 20;332(6032):970-4
PMID: 21596990
-
Microbial ecology: human gut microbes associated with obesity.
Nature. 2006 Dec 21;444(7122):1022-3
PMID: 17183309
-
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy.
Appl Environ Microbiol. 2007 Aug;73(16):5261-7
PMID: 17586664
-
Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data.
ISME J. 2010 Jan;4(1):17-27
PMID: 19710709
-
Exploring prokaryotic taxonomy.
Int J Syst Evol Microbiol. 2004 Jan;54(Pt 1):7-13
PMID: 14742453
-
Metabolomics reveals metabolic biomarkers of Crohn's disease.
PLoS One. 2009 Jul 28;4(7):e6386
PMID: 19636438
-
Linking long-term dietary patterns with gut microbial enterotypes.
Science. 2011 Oct 7;334(6052):105-8
PMID: 21885731
-
Sarcopenia: European consensus on definition and diagnosis: Report of the European Working Group on Sarcopenia in Older People.
Age Ageing. 2010 Jul;39(4):412-23
PMID: 20392703
-
Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults.
Environ Microbiol. 2009 Jul;11(7):1736-51
PMID: 19508560
-
Sociodemographic, health and lifestyle predictors of poor diets.
Public Health Nutr. 2011 Dec;14(12):2166-75
PMID: 21729473
-
Age related changes in gut physiology and nutritional status.
Gut. 1996 Mar;38(3):306-9
PMID: 8675079
-
Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa.
Proc Natl Acad Sci U S A. 2010 Aug 17;107(33):14691-6
PMID: 20679230
-
A new index to measure healthy food diversity better reflects a healthy diet than traditional measures.
J Nutr. 2007 Mar;137(3):647-51
PMID: 17311954
-
Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs.
Genome Res. 2004 Jun;14(6):1147-59
PMID: 15140833
-
PyNAST: a flexible tool for aligning sequences to a template alignment.
Bioinformatics. 2010 Jan 15;26(2):266-7
PMID: 19914921
-
UniFrac: a new phylogenetic method for comparing microbial communities.
Appl Environ Microbiol. 2005 Dec;71(12):8228-35
PMID: 16332807
-
Dominant and diet-responsive groups of bacteria within the human colonic microbiota.
ISME J. 2011 Feb;5(2):220-30
PMID: 20686513
-
FastTree 2--approximately maximum-likelihood trees for large alignments.
PLoS One. 2010 Mar 10;5(3):e9490
PMID: 20224823
-
Predicting a human gut microbiota's response to diet in gnotobiotic mice.
Science. 2011 Jul 1;333(6038):101-4
PMID: 21596954
-
Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases.
Proc Natl Acad Sci U S A. 2007 Aug 21;104(34):13780-5
PMID: 17699621
-
Fecal microbiota composition and frailty.
Appl Environ Microbiol. 2005 Oct;71(10):6438-42
PMID: 16204576
-
Enterotypes of the human gut microbiome.
Nature. 2011 May 12;473(7346):174-80
PMID: 21508958
-
Gut flora metabolism of phosphatidylcholine promotes cardiovascular disease.
Nature. 2011 Apr 7;472(7341):57-63
PMID: 21475195
-
MetaGene: prokaryotic gene finding from environmental genome shotgun sequences.
Nucleic Acids Res. 2006;34(19):5623-30
PMID: 17028096
-
The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice.
Sci Transl Med. 2009 Nov 11;1(6):6ra14
PMID: 20368178
-
Comparative analysis of pyrosequencing and a phylogenetic microarray for exploring microbial community structures in the human distal intestine.
PLoS One. 2009 Aug 20;4(8):e6669
PMID: 19693277
-
Composition, variability, and temporal stability of the intestinal microbiota of the elderly.
Proc Natl Acad Sci U S A. 2011 Mar 15;108 Suppl 1:4586-91
PMID: 20571116