Home LiteratureArticle Details
PMID: 226979 Published · ppublish English Journal Article

Nicking-closing activity associated with bacteriophage lambda int gene product.

Kikuchi Y, Nash HA

Abstract

Integrative recombination of bacteriophage lambda requires the action of the protein Int, the product of the phage int gene. In this paper we show that highly purified Int relaxes supercoiled DNA. The association of this nicking-closing activity with Int is shown by: (i) the cosedimentation of nicking-closing and recombination activities of purified Int, (ii) the parallel inactivation of the two activities in purified Int by both heat and a specific antiserum, and (iii) the alteration of both activities in crude extracts of a strain expressing a mutant int gene. The nicking-closing activity of Int functions in the absence of divalent cations and in the absence of an apparent source of chemical energy. The activity displays no obvious sequence specificity and is inhibited by Mg2+, spermidine, and single-stranded DNA. Int relaxes positive as well as negative supercoils. We present a model for the mechanism of strand exchange that describes how the nicking-closing activity of Int might be used during recombination.

MeSH Terms
Bacteriophage lambda/enzymology,genetics DNA Topoisomerases, Type I/metabolism DNA, Circular/metabolism DNA, Superhelical/metabolism Genes Genes, Viral Magnesium/pharmacology Recombination, Genetic/drug effects Topoisomerase I Inhibitors
Chemicals
DNA, Circular DNA, Superhelical Topoisomerase I Inhibitors DNA Topoisomerases, Type I Magnesium
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Kikuchi Y
Nash H A
References (23)
23 references, click to expand
  1. Proteins that affect DNA conformation.
    Annu Rev Biochem. 1978;47:449-79 PMID: 209728
  2. Restriction assay for integrative recombination of bacteriophage lambda DNA in vitro: requirement for closed circular DNA substrate.
    Proc Natl Acad Sci U S A. 1976 Oct;73(10):3524-8 PMID: 1068464
  3. Integrative recombination of bacteriophage lambda: requirement for supertwisted DNA in vivo and characterization of int.
    Cold Spring Harb Symp Quant Biol. 1979;43 Pt 2:1099-109 PMID: 226309
  4. Renaturation of complementary single-stranded DNA circles: complete rewinding facilitated by the DNA untwisting enzyme.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5328-32 PMID: 202951
  5. Integrative recombination of bacteriophage lambda: in vitro study of the intermolecular reaction.
    Cold Spring Harb Symp Quant Biol. 1979;43 Pt 2:1111-4 PMID: 158463
  6. Genetic recombination: strand transfer and mismatch repair.
    Annu Rev Biochem. 1978;47:847-80 PMID: 150254
  7. Strand exchange in site-specific recombination.
    Proc Natl Acad Sci U S A. 1979 Mar;76(3):1363-7 PMID: 375237
  8. Energy coupling in DNA gyrase and the mechanism of action of novobiocin.
    Proc Natl Acad Sci U S A. 1978 Oct;75(10):4838-42 PMID: 368801
  9. The bacteriophage lambda int gene product. A filter assay for genetic recombination, purification of int, and specific binding to DNA.
    J Biol Chem. 1978 Oct 25;253(20):7149-57 PMID: 359544
  10. Involement of supertwisted DNA in integrative recombination of bacteriophage lambda.
    J Mol Biol. 1978 May 25;121(3):375-92 PMID: 353288
  11. In vitro system from Escherichia coli that catalyzes generalized genetic recombination.
    Proc Natl Acad Sci U S A. 1978 Aug;75(8):3698-702 PMID: 358195
  12. Integration and excision of bacteriophage lambda.
    Curr Top Microbiol Immunol. 1977;78:171-99 PMID: 340148
  13. Construction and characterization of new cloning vehicles. II. A multipurpose cloning system.
    Gene. 1977;2(2):95-113 PMID: 344137
  14. Nalidixic acid resistance: a second genetic character involved in DNA gyrase activity.
    Proc Natl Acad Sci U S A. 1977 Nov;74(11):4772-6 PMID: 337300
  15. Viral integration and excision: structure of the lambda att sites.
    Science. 1977 Sep 16;197(4309):1147-60 PMID: 331474
  16. Lambdoid phages that simplify the recovery of in vitro recombinants.
    Mol Gen Genet. 1977 Jan 7;150(1):53-61 PMID: 319344
  17. Regulation of integration by coliphage lambda: activation of int transcription by the cII and cIII proteins.
    Virology. 1979 Jan 30;92(2):542-56 PMID: 425325
  18. On the role of the bacteriophage lambda int gene product in site specific recombination.
    J Mol Biol. 1977 Nov 5;116(3):627-31 PMID: 592396
  19. A genetic analysis of the att-int-xis region of coliphage lambda.
    J Mol Biol. 1977 Apr;111(2):97-120 PMID: 859185
  20. Stepwise relaxation of supercoiled SV40 DNA.
    Cold Spring Harb Symp Quant Biol. 1975;39 Pt 1:199-208 PMID: 169060
  21. Lysogenization and curing by int-constitutive mutants of phage lambda.
    Virology. 1974 Jul;60(1):157-65 PMID: 4841175
  22. Integrative recombination of bacteriophage lambda DNA in vitro.
    Proc Natl Acad Sci U S A. 1975 Mar;72(3):1072-6 PMID: 1055366
  23. Models of specifically paired like (homologous) nucleic acid structures.
    J Mol Biol. 1971 Jan 28;55(2):293-8 PMID: 5548611
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1979-08-00
Pages
3760-4
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC383913
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com