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PMID: 20878950 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Inherited genetic markers discovered to date are able to identify a significant number of men at considerably elevated risk for prostate cancer.

The Prostate ·Vol. 71 ·No. 4 ·2011-03-01 ·Pages 421-30

Sun J, Kader AK, Hsu FC, Kim ST, Zhu Y, Turner AR, Jin T, Zhang Z, Adolfsson J, Wiklund F, Zheng SL, Isaacs WB, Grönberg H, Xu J

Abstract

Prostate cancer (PCa) risk-associated single-nucleotide polymorphisms (SNPs) are continuously being discovered. Their ability to identify men at high risk and the impact of increasing numbers of SNPs on predictive performance are not well understood. Absolute risk for PCa was estimated in a population-based case-control study in Sweden (2,899 cases and 1,722 controls) using family history and three sets of sequentially discovered PCa risk-associated SNPs. Their performance in predicting PCa was assessed by positive predictive values (PPV) and sensitivity. SNPs and family history were able to differentiate individual risk for PCa and identify men at higher risk; ∼18% and ∼8% of men in the study had 20-year (55-74 years) absolute risks that were twofold (0.24) or threefold (0.36) greater than the population median risk (0.12), respectively. When predictive performances were compared at absolute risk cutoffs of 0.12, 0.24, or 0.36, PPV increased considerably (∼20%, ∼30%, and ∼37%, respectively) while sensitivity decreased considerably (∼55%, ∼20%, and ∼10%, respectively). In contrast, when increasing numbers of SNPs (5, 11, and 28 SNPs) were used in risk prediction, PPV approached a constant value while sensitivity increased steadily. SNPs discovered to date are suitable for risk prediction while additional SNPs discovered in the future may identify more subjects at higher risk. Men identified as high risk by SNP-based testing may be targeted for PCa screening or chemoprevention. The clinical impact on improving the effectiveness of these interventions can be and should be assessed.

MeSH Terms
Aged Genetic Markers Humans Male Middle Aged Polymorphism, Single Nucleotide Prostatic Neoplasms/etiology,genetics Risk
Chemicals
Genetic Markers
Authors & Affiliations
14 authors, click to expand affiliations / ORCID
Sun Jielin
Center for Cancer Genomics, Wake Forest University School of Medicine, Winston-Salem, North Carolina 27157, USA.
Kader A Karim
Hsu Fang-Chi
Kim Seong-Tae
Zhu Yi
Turner Aubrey R
Jin Tao
Zhang Zheng
Adolfsson Jan
Wiklund Fredrik
Zheng S Lilly
Isaacs William B
Grönberg Henrik
Xu Jianfeng
References (29)
29 references, click to expand
  1. Effect of dutasteride on the detection of prostate cancer in men with benign prostatic hyperplasia.
    Urology. 2004 Sep;64(3):537-41; discussion 542-3 PMID: 15351586
  2. Mortality results from a randomized prostate-cancer screening trial.
    N Engl J Med. 2009 Mar 26;360(13):1310-9 PMID: 19297565
  3. Screening and prostate-cancer mortality in a randomized European study.
    N Engl J Med. 2009 Mar 26;360(13):1320-8 PMID: 19297566
  4. Individual and cumulative effect of prostate cancer risk-associated variants on clinicopathologic variables in 5,895 prostate cancer patients.
    Prostate. 2009 Aug 1;69(11):1195-205 PMID: 19434657
  5. Environmental and heritable factors in the causation of cancer--analyses of cohorts of twins from Sweden, Denmark, and Finland.
    N Engl J Med. 2000 Jul 13;343(2):78-85 PMID: 10891514
  6. Multiple newly identified loci associated with prostate cancer susceptibility.
    Nat Genet. 2008 Mar;40(3):316-21 PMID: 18264097
  7. Genetic risk prediction--are we there yet?
    N Engl J Med. 2009 Apr 23;360(17):1701-3 PMID: 19369656
  8. The influence of finasteride on the development of prostate cancer.
    N Engl J Med. 2003 Jul 17;349(3):215-24 PMID: 12824459
  9. Identification of seven new prostate cancer susceptibility loci through a genome-wide association study.
    Nat Genet. 2009 Oct;41(10):1116-21 PMID: 19767753
  10. Comparing the areas under two or more correlated receiver operating characteristic curves: a nonparametric approach.
    Biometrics. 1988 Sep;44(3):837-45 PMID: 3203132
  11. A common variant associated with prostate cancer in European and African populations.
    Nat Genet. 2006 Jun;38(6):652-8 PMID: 16682969
  12. Genome-wide association and replication studies identify four variants associated with prostate cancer susceptibility.
    Nat Genet. 2009 Oct;41(10):1122-6 PMID: 19767754
  13. Estimation of absolute risk for prostate cancer using genetic markers and family history.
    Prostate. 2009 Oct 1;69(14):1565-72 PMID: 19562736
  14. Cancer statistics, 2009.
    CA Cancer J Clin. 2009 Jul-Aug;59(4):225-49 PMID: 19474385
  15. Genome-wide association study identifies a second prostate cancer susceptibility variant at 8q24.
    Nat Genet. 2007 May;39(5):631-7 PMID: 17401366
  16. Multiple loci identified in a genome-wide association study of prostate cancer.
    Nat Genet. 2008 Mar;40(3):310-5 PMID: 18264096
  17. Two genome-wide association studies of aggressive prostate cancer implicate putative prostate tumor suppressor gene DAB2IP.
    J Natl Cancer Inst. 2007 Dec 19;99(24):1836-44 PMID: 18073375
  18. Personalized genetic prediction: too limited, too expensive, or too soon?
    Ann Intern Med. 2009 Jan 20;150(2):139-41 PMID: 19153414
  19. Cumulative association of five genetic variants with prostate cancer.
    N Engl J Med. 2008 Feb 28;358(9):910-9 PMID: 18199855
  20. Analysis of recently identified prostate cancer susceptibility loci in a population-based study: associations with family history and clinical features.
    Clin Cancer Res. 2009 May 1;15(9):3231-7 PMID: 19366831
  21. Two variants on chromosome 17 confer prostate cancer risk, and the one in TCF2 protects against type 2 diabetes.
    Nat Genet. 2007 Aug;39(8):977-83 PMID: 17603485
  22. Genome-wide association study of prostate cancer identifies a second risk locus at 8q24.
    Nat Genet. 2007 May;39(5):645-9 PMID: 17401363
  23. Use of 5-alpha-reductase inhibitors for prostate cancer chemoprevention: American Society of Clinical Oncology/American Urological Association 2008 Clinical Practice Guideline.
    J Clin Oncol. 2009 Mar 20;27(9):1502-16 PMID: 19252137
  24. Cost-effectiveness of prostate cancer chemoprevention: a quality of life-years analysis.
    Cancer. 2008 Mar 1;112(5):1058-65 PMID: 18186497
  25. Limitations of the odds ratio in gauging the performance of a diagnostic, prognostic, or screening marker.
    Am J Epidemiol. 2004 May 1;159(9):882-90 PMID: 15105181
  26. Common sequence variants on 2p15 and Xp11.22 confer susceptibility to prostate cancer.
    Nat Genet. 2008 Mar;40(3):281-3 PMID: 18264098
  27. Inherited genetic variant predisposes to aggressive but not indolent prostate cancer.
    Proc Natl Acad Sci U S A. 2010 Feb 2;107(5):2136-40 PMID: 20080650
  28. Identification of a new prostate cancer susceptibility locus on chromosome 8q24.
    Nat Genet. 2009 Oct;41(10):1055-7 PMID: 19767755
  29. Genome-wide association studies in cancer.
    Hum Mol Genet. 2008 Oct 15;17(R2):R109-15 PMID: 18852198
Article Info
Journal
The Prostate
Abbr.
Prostate
ISSN
1097-0045
Published
2011-03-01
Epub
2010-00-28
Pages
421-30
Language
English
Region
United States
NLM ID
8101368
PMCID
PMC3025084
Subset
IM
Grants
NCI NIH HHS · R01 CA140262 · United States
NCI NIH HHS · R01CA129684 · United States
NCI NIH HHS · R01CA133009 · United States
NCI NIH HHS · RC2CA148463 · United States
NCI NIH HHS · R01CA140262 · United States
NCI NIH HHS · R01 CA129684-03 · United States
NCI NIH HHS · R01 CA129684 · United States
NCI NIH HHS · R01 CA140262-03 · United States
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