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PMID: 20453848 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Dynamics of single mRNP nucleocytoplasmic transport and export through the nuclear pore in living cells.

Nature cell biology ·Vol. 12 ·No. 6 ·2010-06-00 ·Pages 543-52

Mor A, Suliman S, Ben-Yishay R, Yunger S, Brody Y, Shav-Tal Y

Abstract

The flow of genetic information in eukaryotic cells occurs through the nucleocytoplasmic translocation of mRNAs. Knowledge of in vivo messenger RNA export kinetics remains poor in comparison with that of protein transport. We have established a mammalian system that allowed the real-time visualization and quantification of large single mRNA-protein complexes (mRNPs) during export. The in vivo dynamics of bulk mRNP transport and export, from transcription to the nuclear pore complex (NPC), occurred within a 5-40 minute time frame, with no NPC pile-up. mRNP export was rapid (about 0.5 s) and kinetically faster than nucleoplasmic diffusion. Export inhibition demonstrated that mRNA-NPC interactions were independent of ongoing export. Nucleoplasmic transport dynamics of intron-containing and intronless mRNAs were similar, yet an intron did increase export efficiency. Here we provide visualization and analysis at the single mRNP level of the various steps in nuclear gene expression and the inter-chromatin tracks through which mRNPs diffuse, and demonstrate the kinetics of mRNP-NPC interactions and translocation.

MeSH Terms
Active Transport, Cell Nucleus/genetics Animals Biological Transport/genetics Cell Nucleus/genetics,metabolism Cells/metabolism Chromosomes/metabolism Introns Mammals/genetics,metabolism Nuclear Pore/genetics,metabolism Protein Transport/genetics RNA, Messenger/genetics,metabolism Ribonucleoproteins/metabolism
Chemicals
RNA, Messenger Ribonucleoproteins messenger ribonucleoprotein
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Mor Amir
The Mina & Everard Goodman Faculty of Life Sciences & Institute of Nanotechnology, Bar-Ilan University, Ramat Gan 52900, Israel.
Suliman Shimrit
Ben-Yishay Rakefet
Yunger Sharon
Brody Yehuda
Shav-Tal Yaron
References (53)
53 references, click to expand
  1. On the localization and transport of specific adenoviral mRNA-sequences in the late infected HeLa cell.
    Nucleic Acids Res. 1982 Oct 11;10(19):6131-45 PMID: 6128726
  2. Macromolecular mobility inside the cell nucleus.
    Trends Cell Biol. 2002 Nov;12(11):491-5 PMID: 12446102
  3. Assembly and transport of a premessenger RNP particle.
    Proc Natl Acad Sci U S A. 2001 Jun 19;98(13):7012-7 PMID: 11416180
  4. Kinetic analysis of translocation through nuclear pore complexes.
    EMBO J. 2001 Mar 15;20(6):1320-30 PMID: 11250898
  5. Visualization of gene activity in living cells.
    Nat Cell Biol. 2000 Dec;2(12):871-8 PMID: 11146650
  6. A nuclear export signal in hnRNP A1: a signal-mediated, temperature-dependent nuclear protein export pathway.
    Cell. 1995 Nov 3;83(3):415-22 PMID: 8521471
  7. A reaction-diffusion model to study RNA motion by quantitative fluorescence recovery after photobleaching.
    Biophys J. 2007 Apr 15;92(8):2694-703 PMID: 17259280
  8. Crossing the nuclear envelope: hierarchical regulation of nucleocytoplasmic transport.
    Science. 2007 Nov 30;318(5855):1412-6 PMID: 18048681
  9. Visualizing nuclear export of different classes of RNA by electron microscopy.
    RNA. 1997 May;3(5):498-513 PMID: 9149231
  10. Photobleaching microscopy reveals the dynamics of mRNA-binding proteins inside live cell nuclei.
    Prog Mol Subcell Biol. 2004;35:119-34 PMID: 15113082
  11. Dynamics of single mRNPs in nuclei of living cells.
    Science. 2004 Jun 18;304(5678):1797-800 PMID: 15205532
  12. Chromatin domains and the interchromatin compartment form structurally defined and functionally interacting nuclear networks.
    Chromosome Res. 2006;14(7):707-33 PMID: 17115328
  13. Functional EGFP-dystrophin fusion proteins for gene therapy vector development.
    Protein Eng. 2000 Sep;13(9):611-5 PMID: 11054455
  14. Exporting RNA from the nucleus to the cytoplasm.
    Nat Rev Mol Cell Biol. 2007 Oct;8(10):761-73 PMID: 17786152
  15. High resolution analysis of interphase chromosome domains.
    J Cell Sci. 2000 Jul;113 ( Pt 14):2585-93 PMID: 10862716
  16. The nuclear pore complex: nucleocytoplasmic transport and beyond.
    Nat Rev Mol Cell Biol. 2003 Oct;4(10):757-66 PMID: 14570049
  17. Single-particle tracking: applications to membrane dynamics.
    Annu Rev Biophys Biomol Struct. 1997;26:373-99 PMID: 9241424
  18. Splicing is required for rapid and efficient mRNA export in metazoans.
    Proc Natl Acad Sci U S A. 1999 Dec 21;96(26):14937-42 PMID: 10611316
  19. The signal sequence coding region promotes nuclear export of mRNA.
    PLoS Biol. 2007 Dec;5(12):e322 PMID: 18052610
  20. From birth to death: the complex lives of eukaryotic mRNAs.
    Science. 2005 Sep 2;309(5740):1514-8 PMID: 16141059
  21. Autonomy and robustness of translocation through the nuclear pore complex: a single-molecule study.
    J Cell Biol. 2008 Oct 6;183(1):77-86 PMID: 18824568
  22. Towards reconciling structure and function in the nuclear pore complex.
    Histochem Cell Biol. 2008 Feb;129(2):105-16 PMID: 18228033
  23. Very mild muscular dystrophy associated with the deletion of 46% of dystrophin.
    Nature. 1990 Jan 11;343(6254):180-2 PMID: 2404210
  24. Translocation of a specific premessenger ribonucleoprotein particle through the nuclear pore studied with electron microscope tomography.
    Cell. 1992 May 15;69(4):605-13 PMID: 1586943
  25. The functional architecture of the nucleus as analysed by ultrastructural cytochemistry.
    Histochem Cell Biol. 2004 Aug;122(2):83-93 PMID: 15300441
  26. In vivo kinetics of mRNA splicing and transport in mammalian cells.
    Mol Cell Biol. 2002 Oct;22(19):6706-18 PMID: 12215528
  27. From silencing to gene expression: real-time analysis in single cells.
    Cell. 2004 Mar 5;116(5):683-98 PMID: 15006351
  28. Nuclear transport of single molecules: dwell times at the nuclear pore complex.
    J Cell Biol. 2005 Jan 17;168(2):233-43 PMID: 15657394
  29. Nuclear export of different classes of RNA is mediated by specific factors.
    J Cell Biol. 1994 Mar;124(5):627-35 PMID: 7509815
  30. Mechanism of mRNA transport in the nucleus.
    Proc Natl Acad Sci U S A. 2005 Nov 22;102(47):17008-13 PMID: 16284251
  31. Stepwise RNP assembly at the site of H/ACA RNA transcription in human cells.
    J Cell Biol. 2006 Apr 24;173(2):207-18 PMID: 16618814
  32. Discontinuous movement of mRNP particles in nucleoplasmic regions devoid of chromatin.
    Proc Natl Acad Sci U S A. 2008 Dec 23;105(51):20291-6 PMID: 19074261
  33. In vivo analysis of the stability and transport of nuclear poly(A)+ RNA.
    J Cell Biol. 1994 Aug;126(4):877-99 PMID: 7519622
  34. Nuclear import time and transport efficiency depend on importin beta concentration.
    J Cell Biol. 2006 Sep 25;174(7):951-61 PMID: 16982803
  35. Identification and characterization of a nuclear pore complex protein.
    Cell. 1986 Jun 6;45(5):699-709 PMID: 3518946
  36. Export of mRNA from microinjected nuclei of Xenopus laevis oocytes.
    J Cell Biol. 1992 Jul;118(1):1-9 PMID: 1618896
  37. In vivo dynamics of RNA polymerase II transcription.
    Nat Struct Mol Biol. 2007 Sep;14(9):796-806 PMID: 17676063
  38. Localization of ASH1 mRNA particles in living yeast.
    Mol Cell. 1998 Oct;2(4):437-45 PMID: 9809065
  39. Permeability measurements with closed vesicles from rat liver nuclear envelopes.
    Proc Natl Acad Sci U S A. 1987 Jun;84(11):3540-4 PMID: 3473467
  40. The path of RNA through nuclear pores: apparent entry from the sides into specialized pores.
    J Cell Sci. 2000 Jan;113 Pt 2:291-302 PMID: 10633080
  41. Imaging of single-molecule translocation through nuclear pore complexes.
    Proc Natl Acad Sci U S A. 2004 Aug 31;101(35):12887-92 PMID: 15306682
  42. Further evidence on the nuclear origin and transfer to the cytoplasm of polyadenylic acid sequences in mammalian cell RNA.
    J Mol Biol. 1973 Apr 15;75(3):515-32 PMID: 4125135
  43. Characterisation of the passive permeability barrier of nuclear pore complexes.
    EMBO J. 2009 Sep 2;28(17):2541-53 PMID: 19680228
  44. Metastable network model of protein transport through nuclear pores.
    Biophys J. 2004 Apr;86(4):2008-16 PMID: 15041643
  45. Movement of nuclear poly(A) RNA throughout the interchromatin space in living cells.
    Curr Biol. 1999 Mar 25;9(6):285-91 PMID: 10209094
  46. Globin RNA precursor molecules: biosynthesis and process in erythroid cells.
    Cell. 1977 Jul;11(3):641-50 PMID: 884738
  47. The path of transcripts from extra-nucleolar synthetic sites to nuclear pores: transcripts in transit are concentrated in discrete structures containing SR proteins.
    J Cell Sci. 1998 Aug;111 ( Pt 15):2269-82 PMID: 9664048
  48. Splicing promotes rapid and efficient mRNA export in mammalian cells.
    Proc Natl Acad Sci U S A. 2008 Mar 4;105(9):3386-91 PMID: 18287003
  49. Studies on protein kinases involved in regulation of nucleocytoplasmic mRNA transport.
    Biochem J. 1988 Jun 15;252(3):777-90 PMID: 2844156
  50. Systematic kinetic analysis of mitotic dis- and reassembly of the nuclear pore in living cells.
    J Cell Biol. 2008 Mar 10;180(5):857-65 PMID: 18316408
  51. Regulation of mRNP dynamics along the export pathway.
    FEBS Lett. 2008 Jun 18;582(14):1987-96 PMID: 18394429
  52. Gene gating: a hypothesis.
    Proc Natl Acad Sci U S A. 1985 Dec;82(24):8527-9 PMID: 3866238
  53. Rapid translocation of NTF2 through the nuclear pore of isolated nuclei and nuclear envelopes.
    EMBO Rep. 2002 Sep;3(9):887-92 PMID: 12189172
Article Info
Journal
Nature cell biology
Abbr.
Nat Cell Biol
ISSN
1476-4679
Published
2010-06-00
Epub
2010-00-09
Pages
543-52
Language
English
Region
England
NLM ID
100890575
Subset
IM
Corrections
CommentIn
CommentIn
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