-
Are rare variants responsible for susceptibility to complex diseases?
Am J Hum Genet. 2001 Jul;69(1):124-37
PMID: 11404818
-
HapMap tagSNP transferability in multiple populations: general guidelines.
Genomics. 2008 Jul;92(1):41-51
PMID: 18482828
-
The genome-wide patterns of variation expose significant substructure in a founder population.
Am J Hum Genet. 2008 Dec;83(6):787-94
PMID: 19061986
-
msHOT: modifying Hudson's ms simulator to incorporate crossover and gene conversion hotspots.
Bioinformatics. 2007 Feb 15;23(4):520-1
PMID: 17150995
-
A genomewide single-nucleotide-polymorphism panel for Mexican American admixture mapping.
Am J Hum Genet. 2007 Jun;80(6):1014-23
PMID: 17557415
-
On transferability of genome-wide tagSNPs.
Genet Epidemiol. 2008 Feb;32(2):89-97
PMID: 17896344
-
Common vs. rare allele hypotheses for complex diseases.
Curr Opin Genet Dev. 2009 Jun;19(3):212-9
PMID: 19481926
-
Genetic variation and population structure in native Americans.
PLoS Genet. 2007 Nov;3(11):e185
PMID: 18039031
-
Fregene: simulation of realistic sequence-level data in populations and ascertained samples.
BMC Bioinformatics. 2008 Sep 08;9:364
PMID: 18778480
-
Linkage disequilibrium and association mapping.
Annu Rev Genomics Hum Genet. 2008;9:129-42
PMID: 18505378
-
Coalescent-based association mapping and fine mapping of complex trait loci.
Genetics. 2005 Feb;169(2):1071-92
PMID: 15489534
-
Variants in KCNQ1 are associated with susceptibility to type 2 diabetes mellitus.
Nat Genet. 2008 Sep;40(9):1092-7
PMID: 18711367
-
The genetic structure and history of Africans and African Americans.
Science. 2009 May 22;324(5930):1035-44
PMID: 19407144
-
Out of Africa: modern human origins special feature: explaining worldwide patterns of human genetic variation using a coalescent-based serial founder model of migration outward from Africa.
Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16057-62
PMID: 19706453
-
Estimating local ancestry in admixed populations.
Am J Hum Genet. 2008 Feb;82(2):290-303
PMID: 18252211
-
Ascertainment bias in studies of human genome-wide polymorphism.
Genome Res. 2005 Nov;15(11):1496-502
PMID: 16251459
-
Reconstructing Indian population history.
Nature. 2009 Sep 24;461(7263):489-94
PMID: 19779445
-
The impact of divergence time on the nature of population structure: an example from Iceland.
PLoS Genet. 2009 Jun;5(6):e1000505
PMID: 19503599
-
Genomewide association studies--illuminating biologic pathways.
N Engl J Med. 2009 Apr 23;360(17):1699-701
PMID: 19369661
-
Admixture mapping of white cell count: genetic locus responsible for lower white blood cell count in the Health ABC and Jackson Heart studies.
Am J Hum Genet. 2008 Jan;82(1):81-7
PMID: 18179887
-
Meta-analysis of the association between SNPs in TCF7L2 and type 2 diabetes in East Asian population.
Diabetes Res Clin Pract. 2009 Aug;85(2):139-46
PMID: 19482368
-
Haplotypes of transcription factor 7-like 2 (TCF7L2) gene and its upstream region are associated with type 2 diabetes and age of onset in Mexican Americans.
Diabetes. 2007 Feb;56(2):389-93
PMID: 17259383
-
Human population structure and genetic association studies.
Pharmacogenomics. 2003 Jul;4(4):431-41
PMID: 12831322
-
Bayesian analysis of haplotypes for linkage disequilibrium mapping.
Genome Res. 2001 Oct;11(10):1716-24
PMID: 11591648
-
Mapping by admixture linkage disequilibrium: advances, limitations and guidelines.
Nat Rev Genet. 2005 Aug;6(8):623-32
PMID: 16012528
-
Psoriasis genome-wide association study identifies susceptibility variants within LCE gene cluster at 1q21.
Nat Genet. 2009 Feb;41(2):205-10
PMID: 19169255
-
SNPs in KCNQ1 are associated with susceptibility to type 2 diabetes in East Asian and European populations.
Nat Genet. 2008 Sep;40(9):1098-102
PMID: 18711366
-
Meta-analysis in genome-wide association studies.
Pharmacogenomics. 2009 Feb;10(2):191-201
PMID: 19207020
-
Population genetic analysis of ascertained SNP data.
Hum Genomics. 2004 Mar;1(3):218-24
PMID: 15588481
-
Investigation of the fine structure of European populations with applications to disease association studies.
Eur J Hum Genet. 2008 Dec;16(12):1413-29
PMID: 19020537
-
African genetic diversity: implications for human demographic history, modern human origins, and complex disease mapping.
Annu Rev Genomics Hum Genet. 2008;9:403-33
PMID: 18593304
-
Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes.
Nat Genet. 2008 May;40(5):638-45
PMID: 18372903
-
Alpha-T-catenin (CTNNA3) gene was identified as a risk variant for toluene diisocyanate-induced asthma by genome-wide association analysis.
Clin Exp Allergy. 2009 Feb;39(2):203-12
PMID: 19187332
-
Genetic variants associated with complex human diseases show wide variation across multiple populations.
Public Health Genomics. 2010;13(2):72-9
PMID: 19439916
-
A general population-genetic model for the production by population structure of spurious genotype-phenotype associations in discrete, admixed or spatially distributed populations.
Genetics. 2006 Jul;173(3):1665-78
PMID: 16582435
-
Refining the impact of TCF7L2 gene variants on type 2 diabetes and adaptive evolution.
Nat Genet. 2007 Feb;39(2):218-25
PMID: 17206141
-
Association of transcription factor 7-like 2 (TCF7L2) variants with type 2 diabetes in a Finnish sample.
Diabetes. 2006 Sep;55(9):2649-53
PMID: 16936217
-
The APOE-epsilon4 allele and the risk of Alzheimer disease among African Americans, whites, and Hispanics.
JAMA. 1998 Mar 11;279(10):751-5
PMID: 9508150
-
Admixture mapping as a tool in gene discovery.
Curr Opin Genet Dev. 2007 Jun;17(3):177-81
PMID: 17466511
-
Reconstructing genetic ancestry blocks in admixed individuals.
Am J Hum Genet. 2006 Jul;79(1):1-12
PMID: 16773560
-
Genetic mapping in human disease.
Science. 2008 Nov 7;322(5903):881-8
PMID: 18988837
-
A genomewide single-nucleotide-polymorphism panel with high ancestry information for African American admixture mapping.
Am J Hum Genet. 2006 Oct;79(4):640-9
PMID: 16960800
-
Missing data imputation and haplotype phase inference for genome-wide association studies.
Hum Genet. 2008 Dec;124(5):439-50
PMID: 18850115
-
The relationship between imputation error and statistical power in genetic association studies in diverse populations.
Am J Hum Genet. 2009 Nov;85(5):692-8
PMID: 19853241
-
Confronting ethnicity-specific disease risk.
Nat Genet. 2006 Jan;38(1):13-5
PMID: 16380723
-
Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium.
Am J Hum Genet. 2004 Jan;74(1):106-20
PMID: 14681826
-
Potential etiologic and functional implications of genome-wide association loci for human diseases and traits.
Proc Natl Acad Sci U S A. 2009 Jun 9;106(23):9362-7
PMID: 19474294
-
Using population mixtures to optimize the utility of genomic databases: linkage disequilibrium and association study design in India.
Ann Hum Genet. 2008 Jul;72(Pt 4):535-46
PMID: 18513279
-
Design and analysis of admixture mapping studies.
Am J Hum Genet. 2004 May;74(5):965-78
PMID: 15088268
-
Evaluating coverage of genome-wide association studies.
Nat Genet. 2006 Jun;38(6):659-62
PMID: 16715099
-
Methodological challenges of genome-wide association analysis in Africa.
Nat Rev Genet. 2010 Feb;11(2):149-60
PMID: 20084087
-
The allele frequency spectrum in genome-wide human variation data reveals signals of differential demographic history in three large world populations.
Genetics. 2004 Jan;166(1):351-72
PMID: 15020430
-
Admixture mapping for hypertension loci with genome-scan markers.
Nat Genet. 2005 Feb;37(2):177-81
PMID: 15665825
-
Genome-wide association studies: implications for multiethnic samples.
Hum Mol Genet. 2008 Oct 15;17(R2):R151-5
PMID: 18852204
-
A human genome diversity cell line panel.
Science. 2002 Apr 12;296(5566):261-2
PMID: 11954565
-
What can genome-wide association studies tell us about the genetics of common disease?
PLoS Genet. 2008 Feb;4(2):e33
PMID: 18454206
-
Population genetics models of common diseases.
Curr Opin Genet Dev. 2006 Dec;16(6):630-6
PMID: 17055247
-
On the allelic spectrum of human disease.
Trends Genet. 2001 Sep;17(9):502-10
PMID: 11525833
-
Admixture mapping of an allele affecting interleukin 6 soluble receptor and interleukin 6 levels.
Am J Hum Genet. 2007 Apr;80(4):716-26
PMID: 17357077
-
Genome-wide association study identifies NRG1 as a susceptibility locus for Hirschsprung's disease.
Proc Natl Acad Sci U S A. 2009 Feb 24;106(8):2694-9
PMID: 19196962
-
Genome-wide association study of electrocardiographic conduction measures in an isolated founder population: Kosrae.
Heart Rhythm. 2009 May;6(5):634-41
PMID: 19389651
-
Use of weighted reference panels based on empirical estimates of ancestry for capturing untyped variation.
Hum Genet. 2009 Apr;125(3):295-303
PMID: 19184111
-
Power consequences of linkage disequilibrium variation between populations.
Genet Epidemiol. 2009 Feb;33(2):128-35
PMID: 18814308
-
Common genetic variation and human traits.
N Engl J Med. 2009 Apr 23;360(17):1696-8
PMID: 19369660
-
A haplotype map of the human genome.
Nature. 2005 Oct 27;437(7063):1299-320
PMID: 16255080
-
Replication of genetic associations as pseudoreplication due to shared genealogy.
Genet Epidemiol. 2009 Sep;33(6):479-87
PMID: 19191270
-
Common variants in the TCF7L2 gene are strongly associated with type 2 diabetes mellitus in the Indian population.
Diabetologia. 2007 Jan;50(1):63-7
PMID: 17093941
-
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
PLoS Genet. 2009 Feb;5(2):e1000365
PMID: 19197348
-
Common and rare variants in multifactorial susceptibility to common diseases.
Nat Genet. 2008 Jun;40(6):695-701
PMID: 18509313
-
Review and evaluation of methods correcting for population stratification with a focus on underlying statistical principles.
Hum Hered. 2008;66(2):67-86
PMID: 18382087
-
Next generation disparities in human genomics: concerns and remedies.
Trends Genet. 2009 Nov;25(11):489-94
PMID: 19836853
-
Linkage disequilibrium--understanding the evolutionary past and mapping the medical future.
Nat Rev Genet. 2008 Jun;9(6):477-85
PMID: 18427557
-
Genotype imputation.
Annu Rev Genomics Hum Genet. 2009;10:387-406
PMID: 19715440
-
A large-scale genome-wide association study of Asian populations uncovers genetic factors influencing eight quantitative traits.
Nat Genet. 2009 May;41(5):527-34
PMID: 19396169
-
Population stratification and spurious allelic association.
Lancet. 2003 Feb 15;361(9357):598-604
PMID: 12598158
-
Genes mirror geography within Europe.
Nature. 2008 Nov 6;456(7218):98-101
PMID: 18758442
-
Linkage disequilibrium: what history has to tell us.
Trends Genet. 2002 Feb;18(2):83-90
PMID: 11818140
-
Analysis of genomic diversity in Mexican Mestizo populations to develop genomic medicine in Mexico.
Proc Natl Acad Sci U S A. 2009 May 26;106(21):8611-6
PMID: 19433783
-
Fast "coalescent" simulation.
BMC Genet. 2006 Mar 15;7:16
PMID: 16539698
-
Genome-wide association studies: potential next steps on a genetic journey.
Hum Mol Genet. 2008 Oct 15;17(R2):R156-65
PMID: 18852205
-
Inference of locus-specific ancestry in closely related populations.
Bioinformatics. 2009 Jun 15;25(12):i213-21
PMID: 19477991
-
Association mapping and significance estimation via the coalescent.
Am J Hum Genet. 2008 Dec;83(6):675-83
PMID: 19026399
-
GENOME: a rapid coalescent-based whole genome simulator.
Bioinformatics. 2007 Jun 15;23(12):1565-7
PMID: 17459963
-
Variant of transcription factor 7-like 2 (TCF7L2) gene confers risk of type 2 diabetes.
Nat Genet. 2006 Mar;38(3):320-3
PMID: 16415884
-
Geographic patterns of genome admixture in Latin American Mestizos.
PLoS Genet. 2008 Mar 21;4(3):e1000037
PMID: 18369456
-
Possible ancestral structure in human populations.
PLoS Genet. 2006 Jul;2(7):e105
PMID: 16895447
-
The road to genome-wide association studies.
Nat Rev Genet. 2008 Apr;9(4):314-8
PMID: 18283274
-
A flexible forward simulator for populations subject to selection and demography.
Bioinformatics. 2008 Dec 1;24(23):2786-7
PMID: 18842601
-
Genome-wide patterns of population structure and admixture in West Africans and African Americans.
Proc Natl Acad Sci U S A. 2010 Jan 12;107(2):786-91
PMID: 20080753
-
Sensitive detection of chromosomal segments of distinct ancestry in admixed populations.
PLoS Genet. 2009 Jun;5(6):e1000519
PMID: 19543370
-
The genetic structure of Pacific Islanders.
PLoS Genet. 2008 Jan;4(1):e19
PMID: 18208337
-
Polymorphisms identified through genome-wide association studies and their associations with type 2 diabetes in Chinese, Malays, and Asian-Indians in Singapore.
J Clin Endocrinol Metab. 2010 Jan;95(1):390-7
PMID: 19892838
-
Correlation between genetic and geographic structure in Europe.
Curr Biol. 2008 Aug 26;18(16):1241-8
PMID: 18691889
-
Calibrating a coalescent simulation of human genome sequence variation.
Genome Res. 2005 Nov;15(11):1576-83
PMID: 16251467
-
Practical considerations for imputation of untyped markers in admixed populations.
Genet Epidemiol. 2010 Apr;34(3):258-65
PMID: 19918757
-
A second generation human haplotype map of over 3.1 million SNPs.
Nature. 2007 Oct 18;449(7164):851-61
PMID: 17943122
-
Ascertainment bias in estimates of average heterozygosity.
Am J Hum Genet. 1996 May;58(5):1033-41
PMID: 8651264
-
Leveraging genetic variability across populations for the identification of causal variants.
Am J Hum Genet. 2010 Jan;86(1):23-33
PMID: 20085711
-
Practical aspects of imputation-driven meta-analysis of genome-wide association studies.
Hum Mol Genet. 2008 Oct 15;17(R2):R122-8
PMID: 18852200
-
Admixture mapping identifies 8q24 as a prostate cancer risk locus in African-American men.
Proc Natl Acad Sci U S A. 2006 Sep 19;103(38):14068-73
PMID: 16945910
-
Genetic structure of human populations.
Science. 2002 Dec 20;298(5602):2381-5
PMID: 12493913
-
Genomewide association studies and human disease.
N Engl J Med. 2009 Apr 23;360(17):1759-68
PMID: 19369657
-
Approximating the coalescent with recombination.
Philos Trans R Soc Lond B Biol Sci. 2005 Jul 29;360(1459):1387-93
PMID: 16048782
-
A worldwide survey of haplotype variation and linkage disequilibrium in the human genome.
Nat Genet. 2006 Nov;38(11):1251-60
PMID: 17057719
-
Genome-wide association studies for complex traits: consensus, uncertainty and challenges.
Nat Rev Genet. 2008 May;9(5):356-69
PMID: 18398418
-
Worldwide population differentiation at disease-associated SNPs.
BMC Med Genomics. 2008 Jun 04;1:22
PMID: 18533027
-
Will admixture mapping work to find disease genes?
Philos Trans R Soc Lond B Biol Sci. 2005 Aug 29;360(1460):1605-7
PMID: 16096110
-
Genetic risk prediction--are we there yet?
N Engl J Med. 2009 Apr 23;360(17):1701-3
PMID: 19369656
-
Statistical evaluation of alternative models of human evolution.
Proc Natl Acad Sci U S A. 2007 Nov 6;104(45):17614-9
PMID: 17978179
-
Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa.
Proc Natl Acad Sci U S A. 2005 Nov 1;102(44):15942-7
PMID: 16243969
-
Personal genomes: The case of the missing heritability.
Nature. 2008 Nov 6;456(7218):18-21
PMID: 18987709
-
Clines, clusters, and the effect of study design on the inference of human population structure.
PLoS Genet. 2005 Dec;1(6):e70
PMID: 16355252
-
Genotype, haplotype and copy-number variation in worldwide human populations.
Nature. 2008 Feb 21;451(7181):998-1003
PMID: 18288195
-
Overcoming the winner's curse: estimating penetrance parameters from case-control data.
Am J Hum Genet. 2007 Apr;80(4):605-15
PMID: 17357068
-
Mapping trait loci by use of inferred ancestral recombination graphs.
Am J Hum Genet. 2006 Nov;79(5):910-22
PMID: 17033967
-
Finding the missing heritability of complex diseases.
Nature. 2009 Oct 8;461(7265):747-53
PMID: 19812666
-
A HapMap harvest of insights into the genetics of common disease.
J Clin Invest. 2008 May;118(5):1590-605
PMID: 18451988
-
Mapping human genetic diversity in Asia.
Science. 2009 Dec 11;326(5959):1541-5
PMID: 20007900
-
Rare variants create synthetic genome-wide associations.
PLoS Biol. 2010 Jan 26;8(1):e1000294
PMID: 20126254
-
Fine-scale mapping of disease loci via shattered coalescent modeling of genealogies.
Am J Hum Genet. 2002 Mar;70(3):686-707
PMID: 11836651
-
A common MYBPC3 (cardiac myosin binding protein C) variant associated with cardiomyopathies in South Asia.
Nat Genet. 2009 Feb;41(2):187-91
PMID: 19151713
-
Prospects for admixture mapping of complex traits.
Am J Hum Genet. 2005 Jan;76(1):1-7
PMID: 15540159
-
Association analysis of 6,736 U.K. subjects provides replication and confirms TCF7L2 as a type 2 diabetes susceptibility gene with a substantial effect on individual risk.
Diabetes. 2006 Sep;55(9):2640-4
PMID: 16936215
-
Human genetic variation and its contribution to complex traits.
Nat Rev Genet. 2009 Apr;10(4):241-51
PMID: 19293820
-
Mathematical properties of the r2 measure of linkage disequilibrium.
Theor Popul Biol. 2008 Aug;74(1):130-7
PMID: 18572214
-
Implications of biogeography of human populations for 'race' and medicine.
Nat Genet. 2004 Nov;36(11 Suppl):S21-7
PMID: 15507999
-
Non-replication of association studies: "pseudo-failures" to replicate?
Genet Med. 2007 Jun;9(6):325-31
PMID: 17575498
-
Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes.
Proc Natl Acad Sci U S A. 2005 Dec 20;102(51):18508-13
PMID: 16352722
-
Allele frequencies and the r2 measure of linkage disequilibrium: impact on design and interpretation of association studies.
Twin Res Hum Genet. 2005 Apr;8(2):87-94
PMID: 15901470
-
A high-density admixture map for disease gene discovery in african americans.
Am J Hum Genet. 2004 May;74(5):1001-13
PMID: 15088270
-
A genomewide admixture map for Latino populations.
Am J Hum Genet. 2007 Jun;80(6):1024-36
PMID: 17503322
-
Fast and flexible simulation of DNA sequence data.
Genome Res. 2009 Jan;19(1):136-42
PMID: 19029539
-
Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies.
Genetics. 2003 Aug;164(4):1567-87
PMID: 12930761
-
Genotype-imputation accuracy across worldwide human populations.
Am J Hum Genet. 2009 Feb;84(2):235-50
PMID: 19215730
-
SNP imputation in association studies.
Nat Biotechnol. 2009 Apr;27(4):349-51
PMID: 19352374
-
Exploring population genetic models with recombination using efficient forward-time simulations.
Genetics. 2008 Apr;178(4):2417-27
PMID: 18430959