Home LiteratureArticle Details
PMID: 1975093 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Molecular mechanisms underlying the expression of the human HOX-5.1 gene.

Nucleic acids research ·Vol. 18 ·No. 15 ·1990-08-11 ·Pages 4361-8

Cianetti L, Di Cristofaro A, Zappavigna V, Bottero L, Boccoli G, Testa U, Russo G, Boncinelli E, Peschle C

Abstract

The complex mechanisms underlying homeobox genes expression involve regulation at transcriptional, post-transcriptional and translational levels. The multiple transcripts of the human HOX-5.1 gene are expressed differentially in tissue- and stage-specific patterns during embryogenesis, and differentially induced by retinoic acid (RA) in human embryonal carcinoma (EC) NT2/D1 cells. We have sequenced 6.3 Kb of the genomic region containing the HOX-5.1 gene and analyzed its mechanisms of expression. Two alternative promoters underlie the transcription of two classes of HOX-5.1-specific mRNAs. These classes differ in tissue and subcellular distribution, induction by RA, structure of the 5'-UT region and mRNA stability: these features are compatible with a differential function of the two classes of transcripts in embryogenesis.

MeSH Terms
Amino Acid Sequence Base Sequence Blotting, Northern Cell Line Embryo, Mammalian/metabolism Embryonal Carcinoma Stem Cells Gene Expression Regulation Genes, Homeobox Humans Molecular Sequence Data Neoplastic Stem Cells Promoter Regions, Genetic Protein Biosynthesis Restriction Mapping Ribonucleases/metabolism Transcription, Genetic Tretinoin/pharmacology
Chemicals
Tretinoin Ribonucleases
Authors & Affiliations
9 authors, click to expand affiliations / ORCID
Cianetti L
Department of Hematology and Oncology, Istituto Superiore di Sanità, Rome, Italy.
Di Cristofaro A
Zappavigna V
Bottero L
Boccoli G
Testa U
Russo G
Boncinelli E
Peschle C
References (36)
36 references, click to expand
  1. Organization of human homeobox genes.
    Hum Reprod. 1988 Oct;3(7):880-6 PMID: 2903172
  2. Differential utilization of the same reading frame in a Xenopus homeobox gene encodes two related proteins sharing the same DNA-binding specificity.
    EMBO J. 1988 Jul;7(7):2139-49 PMID: 2901347
  3. Transgenic mice overexpressing the mouse homoeobox-containing gene Hox-1.4 exhibit abnormal gut development.
    Nature. 1989 Feb 2;337(6206):464-7 PMID: 2563568
  4. The murine and Drosophila homeobox gene complexes have common features of organization and expression.
    Cell. 1989 May 5;57(3):367-78 PMID: 2566383
  5. Craniofacial abnormalities induced by ectopic expression of the homeobox gene Hox-1.1 in transgenic mice.
    Cell. 1989 Jul 28;58(2):337-47 PMID: 2568891
  6. The structural and functional organization of the murine HOX gene family resembles that of Drosophila homeotic genes.
    EMBO J. 1989 May;8(5):1497-505 PMID: 2569969
  7. Differential expression of human HOX-2 genes along the anterior-posterior axis in embryonic central nervous system.
    Differentiation. 1989 Jun;40(3):191-7 PMID: 2570724
  8. Mouse homeo-genes within a subfamily, Hox-1.4, -2.6 and -5.1, display similar anteroposterior domains of expression in the embryo, but show stage- and tissue-dependent differences in their regulation.
    Development. 1989 Sep;107(1):131-41 PMID: 2576400
  9. The mouse Hox-1.4 gene: primary structure, evidence for promoter activity and expression during development.
    Development. 1989 Oct;107(2):343-59 PMID: 2576648
  10. Region-specific enhancers near two mammalian homeo box genes define adjacent rostrocaudal domains in the central nervous system.
    Genes Dev. 1990 Feb;4(2):180-9 PMID: 1970971
  11. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  12. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease.
    Biochemistry. 1979 Nov 27;18(24):5294-9 PMID: 518835
  13. A catalogue of splice junction sequences.
    Nucleic Acids Res. 1982 Jan 22;10(2):459-72 PMID: 7063411
  14. Cell-surface antigens of a clonal human embryonal carcinoma cell line: morphological and antigenic differentiation in culture.
    Int J Cancer. 1982 May 15;29(5):523-31 PMID: 7095898
  15. Pluripotent embryonal carcinoma clones derived from the human teratocarcinoma cell line Tera-2. Differentiation in vivo and in vitro.
    Lab Invest. 1984 Feb;50(2):147-62 PMID: 6694356
  16. Retinoic acid induces neuronal differentiation of a cloned human embryonal carcinoma cell line in vitro.
    Dev Biol. 1984 Jun;103(2):285-93 PMID: 6144603
  17. Poly(pyrimidine) . poly(purine) synthetic DNAs containing 5-methylcytosine form stable triplexes at neutral pH.
    Nucleic Acids Res. 1984 Aug 24;12(16):6603-14 PMID: 6473110
  18. Transcription termination and 3' processing: the end is in site!
    Cell. 1985 Jun;41(2):349-59 PMID: 2580642
  19. Supercoil sequencing: a fast and simple method for sequencing plasmid DNA.
    DNA. 1985 Apr;4(2):165-70 PMID: 3996185
  20. Truncation of exon 1 from the c-myc gene results in prolonged c-myc mRNa stability.
    EMBO J. 1985 Dec 30;4(13B):3727-33 PMID: 4092694
  21. A conserved AU sequence from the 3' untranslated region of GM-CSF mRNA mediates selective mRNA degradation.
    Cell. 1986 Aug 29;46(5):659-67 PMID: 3488815
  22. Differentiation of TERA-2 human embryonal carcinoma cells into neurons and HCMV permissive cells. Induction by agents other than retinoic acid.
    Differentiation. 1986;31(2):119-26 PMID: 3017799
  23. Determinants of messenger RNA stability.
    Cell. 1987 Jan 16;48(1):5-6 PMID: 2431794
  24. Differential and stage-related expression in embryonic tissues of a new human homoeobox gene.
    Nature. 1986 Dec 18-31;324(6098):664-8 PMID: 2879245
  25. Homeotic genes and the homeobox.
    Annu Rev Genet. 1986;20:147-73 PMID: 2880555
  26. Homeo boxes in the study of development.
    Science. 1987 Jun 5;236(4806):1245-52 PMID: 2884726
  27. Two human homeobox genes, c1 and c8: structure analysis and expression in embryonic development.
    Proc Natl Acad Sci U S A. 1987 Jul;84(14):4914-8 PMID: 2885844
  28. Mapping of gene transcripts by nuclease protection assays and cDNA primer extension.
    Methods Enzymol. 1987;152:611-32 PMID: 2821358
  29. Translational control in homoeobox mRNAs?
    Nature. 1987 Dec 24-31;330(6150):701-2 PMID: 2892138
  30. Open reading frames and translational control.
    Nature. 1988 Mar 10;332(6160):117-8 PMID: 2894611
  31. Divergent homeo box proteins recognize similar DNA sequences in Drosophila.
    Nature. 1988 Apr 28;332(6167):858-61 PMID: 2895896
  32. Activation of four homeobox gene clusters in human embryonal carcinoma cells induced to differentiate by retinoic acid.
    Differentiation. 1988;37(1):73-9 PMID: 2898410
  33. At least three human homeoboxes on chromosome 12 belong to the same transcription unit.
    Nucleic Acids Res. 1988 Jun 24;16(12):5379-90 PMID: 2898768
  34. Hox-5.1 defines a homeobox-containing gene locus on mouse chromosome 2.
    Proc Natl Acad Sci U S A. 1988 Jul;85(13):4760-4 PMID: 2898782
  35. The sequence specificity of homeodomain-DNA interaction.
    Cell. 1988 Sep 23;54(7):1081-90 PMID: 3046753
  36. Expression of homeo box genes during mouse development: a review.
    Genes Dev. 1988 Jul;2(7):773-82 PMID: 2905315
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1990-08-11
Pages
4361-8
Language
English
Region
England
NLM ID
0411011
PMCID
PMC331252
Subset
IM
Databases
GENBANK
X17360
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com