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PMID: 19509174 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Targeting DNA methylation.

Issa JP, Kantarjian HM

Abstract

Two nucleoside inhibitors of DNA methylation, azacitidine and decitabine, are now standard of care for the treatment of the myelodysplastic syndrome, a deadly form of leukemia. These old drugs, developed as cytotoxic agents and nearly abandoned decades ago were resurrected by the renewed interest in DNA methylation. They have now provided proof of principle for epigenetic therapy, the final chapter in the long saga to provide legitimacy to the field of epigenetics in cancer. But challenges remain; we don't understand precisely how or why the drugs work or stop working after an initial response. Extending these promising findings to solid tumors faces substantial hurdles from drug uptake to clinical trial design. We do not know yet how to select patients for this therapy and how to move it from life extension to cure. The epigenetic potential of DNA methylation inhibitors may be limited by other epigenetic mechanisms that are also worth exploring as therapeutic targets. But the idea of stably changing gene expression in vivo has transformative potential in cancer therapy and beyond.

MeSH Terms
Antimetabolites, Antineoplastic/therapeutic use Azacitidine/analogs & derivatives,chemistry,therapeutic use Clinical Trials as Topic DNA Methylation/drug effects DNA Modification Methylases/antagonists & inhibitors Decitabine Epigenesis, Genetic/drug effects Humans Myelodysplastic Syndromes/drug therapy,genetics Neoplasms/drug therapy,genetics
Chemicals
Antimetabolites, Antineoplastic Decitabine DNA Modification Methylases Azacitidine
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Issa Jean-Pierre J
Department of Leukemia and Center for Cancer Epigenetics, University of Texas MD Anderson Cancer Center, Houston, Texas 77030, USA. jissa@mdanderson.org
Kantarjian Hagop M
References (58)
58 references, click to expand
  1. Effect of cytarabine and decitabine in combination in human leukemic cell lines.
    Clin Cancer Res. 2007 Jul 15;13(14):4225-32 PMID: 17634552
  2. Delivery of 5-aza-2'-deoxycytidine to cells using oligodeoxynucleotides.
    Cancer Res. 2007 Jul 1;67(13):6400-8 PMID: 17616700
  3. Survival advantage with decitabine versus intensive chemotherapy in patients with higher risk myelodysplastic syndrome: comparison with historical experience.
    Cancer. 2007 Mar 15;109(6):1133-7 PMID: 17315156
  4. Combined DNA methyltransferase and histone deacetylase inhibition in the treatment of myeloid neoplasms.
    Cancer Res. 2006 Jun 15;66(12):6361-9 PMID: 16778214
  5. Safety and clinical activity of the combination of 5-azacytidine, valproic acid, and all-trans retinoic acid in acute myeloid leukemia and myelodysplastic syndrome.
    Blood. 2007 Oct 1;110(7):2302-8 PMID: 17596541
  6. Epigenetic therapy of cancer: past, present and future.
    Nat Rev Drug Discov. 2006 Jan;5(1):37-50 PMID: 16485345
  7. Phase I and pharmacodynamic trial of the DNA methyltransferase inhibitor decitabine and carboplatin in solid tumors.
    J Clin Oncol. 2007 Oct 10;25(29):4603-9 PMID: 17925555
  8. Increased cytosine DNA-methyltransferase activity during colon cancer progression.
    J Natl Cancer Inst. 1993 Aug 4;85(15):1235-40 PMID: 8331684
  9. Efficacy of azacitidine compared with that of conventional care regimens in the treatment of higher-risk myelodysplastic syndromes: a randomised, open-label, phase III study.
    Lancet Oncol. 2009 Mar;10(3):223-32 PMID: 19230772
  10. Chromatin modifications and their function.
    Cell. 2007 Feb 23;128(4):693-705 PMID: 17320507
  11. Lessons from hereditary colorectal cancer.
    Cell. 1996 Oct 18;87(2):159-70 PMID: 8861899
  12. Randomized controlled trial of azacitidine in patients with the myelodysplastic syndrome: a study of the cancer and leukemia group B.
    J Clin Oncol. 2002 May 15;20(10):2429-40 PMID: 12011120
  13. Myelodysplastic syndromes.
    Hematology Am Soc Hematol Educ Program. 2004;:297-317 PMID: 15561689
  14. Toxicity of 5-aza-2'-deoxycytidine to mammalian cells is mediated primarily by covalent trapping of DNA methyltransferase rather than DNA demethylation.
    Proc Natl Acad Sci U S A. 1994 Dec 6;91(25):11797-801 PMID: 7527544
  15. DNA methylation changes after 5-aza-2'-deoxycytidine therapy in patients with leukemia.
    Cancer Res. 2006 May 15;66(10):5495-503 PMID: 16707479
  16. An elaborate pathway required for Ras-mediated epigenetic silencing.
    Nature. 2007 Oct 25;449(7165):1073-7 PMID: 17960246
  17. Cancer DNA methylation: molecular mechanisms and clinical implications.
    Clin Cancer Res. 2009 Jun 15;15(12):3927-37 PMID: 19509173
  18. Phase II study of low-dose decitabine in patients with chronic myelogenous leukemia resistant to imatinib mesylate.
    J Clin Oncol. 2005 Jun 10;23(17):3948-56 PMID: 15883410
  19. Phase I trial of sequential low-dose 5-aza-2'-deoxycytidine plus high-dose intravenous bolus interleukin-2 in patients with melanoma or renal cell carcinoma.
    Clin Cancer Res. 2006 Aug 1;12(15):4619-27 PMID: 16899610
  20. DNMT1 and DNMT3b cooperate to silence genes in human cancer cells.
    Nature. 2002 Apr 4;416(6880):552-6 PMID: 11932749
  21. Reprogramming of a melanoma genome by nuclear transplantation.
    Genes Dev. 2004 Aug 1;18(15):1875-85 PMID: 15289459
  22. Epigenetic changes in solid and hematopoietic tumors.
    Semin Oncol. 2005 Oct;32(5):521-30 PMID: 16210093
  23. An epigenetic approach to the treatment of advanced MDS; the experience with the DNA demethylating agent 5-aza-2'-deoxycytidine (decitabine) in 177 patients.
    Ann Hematol. 2005 Dec;84 Suppl 1:9-17 PMID: 16211386
  24. Stability and flexibility of epigenetic gene regulation in mammalian development.
    Nature. 2007 May 24;447(7143):425-32 PMID: 17522676
  25. A pilot pharmacokinetic study of oral azacitidine.
    Leukemia. 2008 Sep;22(9):1680-4 PMID: 18548103
  26. Decitabine improves patient outcomes in myelodysplastic syndromes: results of a phase III randomized study.
    Cancer. 2006 Apr 15;106(8):1794-803 PMID: 16532500
  27. Nuclear cloning and epigenetic reprogramming of the genome.
    Science. 2001 Aug 10;293(5532):1093-8 PMID: 11498580
  28. Cancer genes and the pathways they control.
    Nat Med. 2004 Aug;10(8):789-99 PMID: 15286780
  29. Concentrations of the DNA methyltransferase inhibitor 5-fluoro-2'-deoxycytidine (FdCyd) and its cytotoxic metabolites in plasma of patients treated with FdCyd and tetrahydrouridine (THU).
    Cancer Chemother Pharmacol. 2008 Jul;62(2):363-8 PMID: 17899082
  30. Synergy of demethylation and histone deacetylase inhibition in the re-expression of genes silenced in cancer.
    Nat Genet. 1999 Jan;21(1):103-7 PMID: 9916800
  31. A phase I biological study of MG98, an oligodeoxynucleotide antisense to DNA methyltransferase 1, in patients with high-risk myelodysplasia and acute myeloid leukemia.
    Clin Cancer Res. 2008 Apr 15;14(8):2444-9 PMID: 18413836
  32. The epigenomics of cancer.
    Cell. 2007 Feb 23;128(4):683-92 PMID: 17320506
  33. Results of a randomized study of 3 schedules of low-dose decitabine in higher-risk myelodysplastic syndrome and chronic myelomonocytic leukemia.
    Blood. 2007 Jan 1;109(1):52-7 PMID: 16882708
  34. Demethylation of a hypermethylated P15/INK4B gene in patients with myelodysplastic syndrome by 5-Aza-2'-deoxycytidine (decitabine) treatment.
    Blood. 2002 Oct 15;100(8):2957-64 PMID: 12351408
  35. Induction of hypomethylation and molecular response after decitabine therapy in patients with chronic myelomonocytic leukemia.
    Blood. 2008 Feb 15;111(4):2382-4 PMID: 18055864
  36. Epigenetic reprogramming in mammalian development.
    Science. 2001 Aug 10;293(5532):1089-93 PMID: 11498579
  37. Phase I study of epigenetic modulation with 5-azacytidine and valproic acid in patients with advanced cancers.
    Clin Cancer Res. 2008 Oct 1;14(19):6296-301 PMID: 18829512
  38. Phase 1 study of low-dose prolonged exposure schedules of the hypomethylating agent 5-aza-2'-deoxycytidine (decitabine) in hematopoietic malignancies.
    Blood. 2004 Mar 1;103(5):1635-40 PMID: 14604977
  39. Multiple new phenotypes induced in 10T1/2 and 3T3 cells treated with 5-azacytidine.
    Cell. 1979 Aug;17(4):771-9 PMID: 90553
  40. DNA methylation as a therapeutic target in cancer.
    Clin Cancer Res. 2007 Mar 15;13(6):1634-7 PMID: 17363514
  41. Cellular differentiation, cytidine analogs and DNA methylation.
    Cell. 1980 May;20(1):85-93 PMID: 6156004
  42. Functional diversity of DNA methyltransferase inhibitors in human cancer cell lines.
    Cancer Res. 2006 Mar 1;66(5):2794-800 PMID: 16510601
  43. Changes in DNA methylation in neoplasia: pathophysiology and therapeutic implications.
    Ann Intern Med. 2001 Apr 3;134(7):573-86 PMID: 11281740
  44. Low-dose decitabine versus best supportive care in elderly patients with intermediate- or high-risk myelodysplastic syndrome (MDS) ineligible for intensive chemotherapy: final results of the randomized phase III study of the European Organisation for Research and Treatment of Cancer Leukemia Group and the German MDS Study Group.
    J Clin Oncol. 2011 May 20;29(15):1987-96 PMID: 21483003
  45. DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome.
    Nature. 2008 Nov 6;456(7218):66-72 PMID: 18987736
  46. Phase 1/2 study of the combination of 5-aza-2'-deoxycytidine with valproic acid in patients with leukemia.
    Blood. 2006 Nov 15;108(10):3271-9 PMID: 16882711
  47. Specific activation of microRNA-127 with downregulation of the proto-oncogene BCL6 by chromatin-modifying drugs in human cancer cells.
    Cancer Cell. 2006 Jun;9(6):435-43 PMID: 16766263
  48. Rational combinations using HDAC inhibitors.
    Clin Cancer Res. 2009 Jun 15;15(12):3970-7 PMID: 19509171
  49. Gene silencing in cancer by histone H3 lysine 27 trimethylation independent of promoter DNA methylation.
    Nat Genet. 2008 Jun;40(6):741-50 PMID: 18488029
  50. Phase I study of decitabine alone or in combination with valproic acid in acute myeloid leukemia.
    J Clin Oncol. 2007 Sep 1;25(25):3884-91 PMID: 17679729
  51. Low-dose 5-aza-2'-deoxycytidine, a DNA hypomethylating agent, for the treatment of high-risk myelodysplastic syndrome: a multicenter phase II study in elderly patients.
    J Clin Oncol. 2000 Mar;18(5):956-62 PMID: 10694544
  52. Comparison of biological effects of non-nucleoside DNA methylation inhibitors versus 5-aza-2'-deoxycytidine.
    Mol Cancer Ther. 2005 Oct;4(10):1515-20 PMID: 16227400
  53. Decitabine--bedside to bench.
    Crit Rev Oncol Hematol. 2007 Feb;61(2):140-52 PMID: 17023173
  54. Mechanisms of resistance to 5-aza-2'-deoxycytidine in human cancer cell lines.
    Blood. 2009 Jan 15;113(3):659-67 PMID: 18931345
  55. Dissecting direct reprogramming through integrative genomic analysis.
    Nature. 2008 Jul 3;454(7200):49-55 PMID: 18509334
  56. Differential mRNA expression of the human DNA methyltransferases (DNMTs) 1, 3a and 3b during the G(0)/G(1) to S phase transition in normal and tumor cells.
    Nucleic Acids Res. 2000 May 15;28(10):2108-13 PMID: 10773079
  57. The genomic landscapes of human breast and colorectal cancers.
    Science. 2007 Nov 16;318(5853):1108-13 PMID: 17932254
  58. DNA methylation patterns and epigenetic memory.
    Genes Dev. 2002 Jan 1;16(1):6-21 PMID: 11782440
Article Info
Journal
Clinical cancer research : an official journal of the American Association for Cancer Research
Abbr.
Clin Cancer Res
ISSN
1557-3265
Published
2009-06-15
Epub
2009-00-09
Pages
3938-46
Language
English
Region
United States
NLM ID
9502500
PMCID
PMC2732562
Subset
IM
Grants
NCI NIH HHS · P50 CA100632-070006 · United States
NCI NIH HHS · P50 CA100632-06S1 · United States
NCI NIH HHS · P50 CA100632-060006 · United States
NCI NIH HHS · P50 CA100632-05 · United States
NCI NIH HHS · P50 CA100632-060001 · United States
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NCI NIH HHS · R01 CA098006-03S1 · United States
NCI NIH HHS · P50 CA100632-04 · United States
NCI NIH HHS · P01 CA108631-030003 · United States
NCI NIH HHS · P50 CA100632-03 · United States
NCI NIH HHS · P50 CA100632-079004 · United States
NCI NIH HHS · P50 CA100632-07 · United States
NCI NIH HHS · R01 CA105346-02 · United States
NCI NIH HHS · R01 CA105346-01 · United States
NCI NIH HHS · P50 CA100632 · United States
NCI NIH HHS · R01 CA098006-04 · United States
NCI NIH HHS · R01 CA098006-03 · United States
NCI NIH HHS · P50 CA100632-010007 · United States
NCI NIH HHS · P50 CA100632-07S1 · United States
NCI NIH HHS · P01 CA108631-020003 · United States
NCI NIH HHS · R01 CA105346 · United States
NCI NIH HHS · P01 CA108631 · United States
NCI NIH HHS · P50 CA100632-06 · United States
NCI NIH HHS · CA100632 · United States
NCI NIH HHS · P01 CA108631-01A10003 · United States
NCI NIH HHS · R01 CA098006-02 · United States
NCI NIH HHS · R01 CA105346-04 · United States
NCI NIH HHS · CA105346 · United States
NCI NIH HHS · R01 CA098006 · United States
NCI NIH HHS · P50 CA100632-069004 · United States
NCI NIH HHS · P50 CA100632-070001 · United States
NCI NIH HHS · CA098006 · United States
NCI NIH HHS · CA108631 · United States
NCI NIH HHS · R01 CA098006-05 · United States
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