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PMID: 19383354 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

CAMK1D amplification implicated in epithelial-mesenchymal transition in basal-like breast cancer.

Molecular oncology ·Vol. 2 ·No. 4 ·2008-12-00 ·Pages 327-39

Bergamaschi A, Kim YH, Kwei KA, La Choi Y, Bocanegra M, Langerød A, Han W, Noh DY, Huntsman DG, Jeffrey SS, Børresen-Dale AL, Pollack JR

Abstract

Breast cancer exhibits clinical and molecular heterogeneity, where expression profiling studies have identified five major molecular subtypes. The basal-like subtype, expressing basal epithelial markers and negative for estrogen receptor (ER), progesterone receptor (PR) and HER2, is associated with higher overall levels of DNA copy number alteration (CNA), specific CNAs (like gain on chromosome 10p), and poor prognosis. Discovering the molecular genetic basis of tumor subtypes may provide new opportunities for therapy. To identify the driver oncogene on 10p associated with basal-like tumors, we analyzed genomic profiles of 172 breast carcinomas. The smallest shared region of gain spanned just seven genes at 10p13, including calcium/calmodulin-dependent protein kinase ID (CAMK1D), functioning in intracellular signaling but not previously linked to cancer. By microarray, CAMK1D was overexpressed when amplified, and by immunohistochemistry exhibited elevated expression in invasive carcinomas compared to carcinoma in situ. Engineered overexpression of CAMK1D in non-tumorigenic breast epithelial cells led to increased cell proliferation, and molecular and phenotypic alterations indicative of epithelial-mesenchymal transition (EMT), including loss of cell-cell adhesions and increased cell migration and invasion. Our findings identify CAMK1D as a novel amplified oncogene linked to EMT in breast cancer, and as a potential therapeutic target with particular relevance to clinically unfavorable basal-like tumors.

MeSH Terms
Breast Neoplasms/pathology Calcium-Calmodulin-Dependent Protein Kinase Type 1/analysis,genetics Cell Adhesion/genetics Cell Proliferation Chromosomes, Human, Pair 10/genetics Epithelial Cells/pathology Female Gene Amplification Humans Immunohistochemistry Mesenchymal Stem Cells/classification,pathology Neoplasm Invasiveness/genetics Oligonucleotide Array Sequence Analysis
Chemicals
CAMK1D protein, human Calcium-Calmodulin-Dependent Protein Kinase Type 1
Authors & Affiliations
12 authors, click to expand affiliations / ORCID
Bergamaschi Anna
Department of Genetics, Institute for Cancer Research, Rikshospitalet-Radiumhospitalet Medical Center, Oslo, Norway.
Kim Young H
Kwei Kevin A
La Choi Yoon
Bocanegra Melanie
Langerød Anita
Han Wonshik
Noh Dong-Young
Huntsman David G
Jeffrey Stefanie S
Børresen-Dale Anne-Lise
Pollack Jonathan R
References (41)
41 references, click to expand
  1. Influence of TP53 gene alterations and c-erbB-2 expression on the response to treatment with doxorubicin in locally advanced breast cancer.
    Cancer Res. 2001 Mar 15;61(6):2505-12 PMID: 11289122
  2. SIRAC: Supervised Identification of Regions of Aberration in aCGH datasets.
    BMC Bioinformatics. 2007 Oct 30;8:422 PMID: 17971227
  3. Utilizing prognostic and predictive factors in breast cancer.
    Curr Treat Options Oncol. 2005 Mar;6(2):147-59 PMID: 15717996
  4. Tissue microarray analysis of neuroendocrine differentiation and its prognostic significance in breast cancer.
    Hum Pathol. 2003 Oct;34(10):1001-8 PMID: 14608533
  5. Carcinoma invasion and metastasis: a role for epithelial-mesenchymal transition?
    Cancer Res. 2005 Jul 15;65(14):5991-5; discussion 5995 PMID: 16024595
  6. Characterization of the role of CaMKI-like kinase (CKLiK) in human granulocyte function.
    Blood. 2005 Aug 1;106(3):1076-83 PMID: 15840691
  7. Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors.
    Proc Natl Acad Sci U S A. 2002 Oct 1;99(20):12963-8 PMID: 12297621
  8. Identification and characterization of novel components of a Ca2+/calmodulin-dependent protein kinase cascade in HeLa cells.
    FEBS Lett. 2003 Aug 28;550(1-3):57-63 PMID: 12935886
  9. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.
    Methods. 2001 Dec;25(4):402-8 PMID: 11846609
  10. Inducible regulatory elements in the human cyclin D1 promoter.
    Oncogene. 1994 Apr;9(4):1295-304 PMID: 8134134
  11. Gene expression profiling and histopathological characterization of triple-negative/basal-like breast carcinomas.
    Breast Cancer Res. 2007;9(5):R65 PMID: 17910759
  12. Distinct patterns of DNA copy number alteration are associated with different clinicopathological features and gene-expression subtypes of breast cancer.
    Genes Chromosomes Cancer. 2006 Nov;45(11):1033-40 PMID: 16897746
  13. Different gene expression patterns in invasive lobular and ductal carcinomas of the breast.
    Mol Biol Cell. 2004 Jun;15(6):2523-36 PMID: 15034139
  14. Repeated observation of breast tumor subtypes in independent gene expression data sets.
    Proc Natl Acad Sci U S A. 2003 Jul 8;100(14):8418-23 PMID: 12829800
  15. The Ca-calmodulin-dependent protein kinase cascade.
    Trends Biochem Sci. 1999 Jun;24(6):232-6 PMID: 10366852
  16. Evidence of progenitor cells of glandular and myoepithelial cell lineages in the human adult female breast epithelium: a new progenitor (adult stem) cell concept.
    Cell Prolif. 2003 Oct;36 Suppl 1:73-84 PMID: 14521517
  17. Molecular portraits of human breast tumours.
    Nature. 2000 Aug 17;406(6797):747-52 PMID: 10963602
  18. Ca(2+)/CaM-dependent kinases: from activation to function.
    Annu Rev Pharmacol Toxicol. 2001;41:471-505 PMID: 11264466
  19. Discovery and validation of breast cancer subtypes.
    BMC Genomics. 2006 Sep 11;7:231 PMID: 16965636
  20. A comparison of gene expression signatures from breast tumors and breast tissue derived cell lines.
    Dis Markers. 2001;17(2):99-109 PMID: 11673656
  21. NCBI Reference Sequence project: update and current status.
    Nucleic Acids Res. 2003 Jan 1;31(1):34-7 PMID: 12519942
  22. The Stanford Microarray Database: implementation of new analysis tools and open source release of software.
    Nucleic Acids Res. 2007 Jan;35(Database issue):D766-70 PMID: 17182626
  23. TP53 gene mutations predict the response to neoadjuvant treatment with 5-fluorouracil and mitomycin in locally advanced breast cancer.
    Clin Cancer Res. 2003 Nov 15;9(15):5582-8 PMID: 14654539
  24. Calcium/calmodulin-dependent kinase I and calcium/calmodulin-dependent kinase kinase participate in the control of cell cycle progression in MCF-7 human breast cancer cells.
    Cancer Res. 2005 Jun 15;65(12):5408-16 PMID: 15958590
  25. Epithelial-mesenchymal transitions in tumour progression.
    Nat Rev Cancer. 2002 Jun;2(6):442-54 PMID: 12189386
  26. Regulation of cyclin D1/Cdk4 complexes by calcium/calmodulin-dependent protein kinase I.
    J Biol Chem. 2004 Apr 9;279(15):15411-9 PMID: 14754892
  27. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.
    Proc Natl Acad Sci U S A. 2005 Oct 25;102(43):15545-50 PMID: 16199517
  28. CAMK1D amplification implicated in epithelial-mesenchymal transition in basal-like breast cancer.
    Mol Oncol. 2008 Dec;2(4):327-39 PMID: 19383354
  29. CREB: a stimulus-induced transcription factor activated by a diverse array of extracellular signals.
    Annu Rev Biochem. 1999;68:821-61 PMID: 10872467
  30. TP53 mutation status and gene expression profiles are powerful prognostic markers of breast cancer.
    Breast Cancer Res. 2007;9(3):R30 PMID: 17504517
  31. Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications.
    Proc Natl Acad Sci U S A. 2001 Sep 11;98(19):10869-74 PMID: 11553815
  32. Rational therapeutic intervention in cancer: kinases as drug targets.
    Curr Opin Genet Dev. 2002 Feb;12(1):111-5 PMID: 11790564
  33. Genomic and transcriptional aberrations linked to breast cancer pathophysiologies.
    Cancer Cell. 2006 Dec;10(6):529-41 PMID: 17157792
  34. GSEA-P: a desktop application for Gene Set Enrichment Analysis.
    Bioinformatics. 2007 Dec 1;23(23):3251-3 PMID: 17644558
  35. Identification and characterization of CKLiK, a novel granulocyte Ca(++)/calmodulin-dependent kinase.
    Blood. 2000 Nov 1;96(9):3215-23 PMID: 11050006
  36. Genome-wide analysis of DNA copy-number changes using cDNA microarrays.
    Nat Genet. 1999 Sep;23(1):41-6 PMID: 10471496
  37. Pieces of the puzzle: expressed sequence tags and the catalog of human genes.
    J Mol Med (Berl). 1997 Oct;75(10):694-8 PMID: 9382993
  38. A method for calling gains and losses in array CGH data.
    Biostatistics. 2005 Jan;6(1):45-58 PMID: 15618527
  39. Race, breast cancer subtypes, and survival in the Carolina Breast Cancer Study.
    JAMA. 2006 Jun 7;295(21):2492-502 PMID: 16757721
  40. Cancer statistics, 2007.
    CA Cancer J Clin. 2007 Jan-Feb;57(1):43-66 PMID: 17237035
  41. Novel patterns of genome rearrangement and their association with survival in breast cancer.
    Genome Res. 2006 Dec;16(12):1465-79 PMID: 17142309
Article Info
Journal
Molecular oncology
Abbr.
Mol Oncol
ISSN
1878-0261
Published
2008-12-00
Epub
2008-00-02
Pages
327-39
Language
English
Region
United States
NLM ID
101308230
PMCID
PMC2653212
Subset
IM
Grants
NCI NIH HHS · R01 CA112016 · United States
NCI NIH HHS · T32 CA009302 · United States
NCI NIH HHS · R01 CA097139-05 · United States
NCI NIH HHS · R01 CA097139 · United States
NCI NIH HHS · CA112016 · United States
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