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PMID: 19141474 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

The A- and B-type nuclear lamin networks: microdomains involved in chromatin organization and transcription.

Genes & development ·Vol. 22 ·No. 24 ·2008-12-15 ·Pages 3409-21

Shimi T, Pfleghaar K, Kojima S, Pack CG, Solovei I, Goldman AE, Adam SA, Shumaker DK, Kinjo M, Cremer T, Goldman RD

Abstract

The nuclear lamins function in the regulation of replication, transcription, and epigenetic modifications of chromatin. However, the mechanisms responsible for these lamin functions are poorly understood. We demonstrate that A- and B-type lamins form separate, but interacting, stable meshworks in the lamina and have different mobilities in the nucleoplasm as determined by fluorescence correlation spectroscopy (FCS). Silencing lamin B1 (LB1) expression dramatically increases the lamina meshwork size and the mobility of nucleoplasmic lamin A (LA). The changes in lamina mesh size are coupled to the formation of LA/C-rich nuclear envelope blebs deficient in LB2. Comparative genomic hybridization (CGH) analyses of microdissected blebs, fluorescence in situ hybridization (FISH), and immunofluorescence localization of modified histones demonstrate that gene-rich euchromatin associates with the LA/C blebs. Enrichment of hyperphosphorylated RNA polymerase II (Pol II) and histone marks for active transcription suggest that blebs are transcriptionally active. However, in vivo labeling of RNA indicates that transcription is decreased, suggesting that the LA/C-rich microenvironment induces promoter proximal stalling of Pol II. We propose that different lamins are organized into separate, but interacting, microdomains and that LB1 is essential for their organization. Our evidence suggests that the organization and regulation of chromatin are influenced by interconnections between these lamin microdomains.

MeSH Terms
Chromatin/genetics,metabolism Cytoskeletal Proteins/genetics DNA Polymerase II/metabolism Gene Expression Regulation Gene Silencing HeLa Cells Humans Lamin Type A/genetics Nuclear Lamina/metabolism
Chemicals
CKAP2 protein, human Chromatin Cytoskeletal Proteins LMNA protein, human Lamin Type A DNA Polymerase II
Authors & Affiliations
11 authors, click to expand affiliations / ORCID
Shimi Takeshi
Department of Cell and Molecular Biology, Northwestern University, Feinberg School of Medicine, Chicago, Illinois 60611, USA.
Pfleghaar Katrin
Kojima Shin-ichiro
Pack Chan-Gi
Solovei Irina
Goldman Anne E
Adam Stephen A
Shumaker Dale K
Kinjo Masataka
Cremer Thomas
Goldman Robert D
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Article Info
Journal
Genes & development
Abbr.
Genes Dev
ISSN
0890-9369
Published
2008-12-15
Pages
3409-21
Language
English
Region
United States
NLM ID
8711660
PMCID
PMC2607069
Subset
IM
Grants
NIA NIH HHS · R01 AG023776 · United States
NCI NIH HHS · R01 CA031760 · United States
NCI NIH HHS · R01CA31760 · United States
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