Abstract
Yeast cell biologists use a variety of fluorescent protein tags for determining protein localization and for measuring protein dynamics using fluorescence recovery after photobleaching (FRAP). Although many modern fluorescent proteins, such as those with photoactivatable and photoconvertible characteristics, have been developed, none has been exploited for studies in budding yeast. We describe here the construction of yeast-tagging vectors containing photoactivatable green fluorescent protein (PA-GFP) for analysis of protein behaviour. We tagged two yeast proteins, Erg6p and Num1p, with PA-GFP and demonstrated specific photoactivation of the fusion proteins in live cells. Fluorescence intensity measurements showed that a short 5 s exposure to 413 nm light is sufficient to produce the maximum level of activated GFP fluorescence. Local photoactivation of cortical Num1p-PA-GFP showed movement of the marked proteins, providing new insights into the behaviour of Num1p at the cell cortex. Since photoactivation can be achieved using standard mercury arc illumination, the PA-GFP tag represents a convenient and economical way to determine protein dynamics in the cell. Thus, the tagging modules should facilitate protein-tracking studies in a wide variety of cell biological processes in yeast.
MeSH Terms
Calcium-Binding Proteins/analysis,genetics,metabolism
Cloning, Molecular
Cytoskeletal Proteins
DNA, Fungal/chemistry,genetics
Fluorescence
Green Fluorescent Proteins/analysis,genetics,metabolism
Methyltransferases/analysis,genetics,metabolism
Microscopy, Confocal
Plasmids/genetics
Polymerase Chain Reaction
Recombinant Proteins/analysis,genetics,metabolism
Saccharomyces cerevisiae/genetics,metabolism
Saccharomyces cerevisiae Proteins/analysis,genetics,metabolism
Chemicals
Calcium-Binding Proteins
Cytoskeletal Proteins
DNA, Fungal
NUM1 protein, S cerevisiae
Recombinant Proteins
Saccharomyces cerevisiae Proteins
Green Fluorescent Proteins
Methyltransferases
delta 24-sterol methyltransferase
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Vorvis Christina
Biology Department, University of Massachusetts at Amherst, 221 Morrill South, 611 North Pleasant Street, Amherst, MA 01003, USA.
Markus Steven M
Lee Wei-Lih
References (22)
22 references, click to expand
-
Global analysis of protein localization in budding yeast.
Nature. 2003 Oct 16;425(6959):686-91
PMID: 14562095
-
Cloning of the late genes in the ergosterol biosynthetic pathway of Saccharomyces cerevisiae--a review.
Lipids. 1995 Mar;30(3):221-6
PMID: 7791529
-
Peripheral, non-centrosome-associated microtubules contribute to spindle formation in centrosome-containing cells.
Curr Biol. 2003 Oct 28;13(21):1894-9
PMID: 14588246
-
The role of the lissencephaly protein Pac1 during nuclear migration in budding yeast.
J Cell Biol. 2003 Feb 3;160(3):355-64
PMID: 12566428
-
Cortical Num1p interacts with the dynein intermediate chain Pac11p and cytoplasmic microtubules in budding yeast.
J Cell Biol. 2001 Jan 22;152(2):251-62
PMID: 11266443
-
Global analysis of protein expression in yeast.
Nature. 2003 Oct 16;425(6959):737-41
PMID: 14562106
-
Epitope tagging of yeast genes using a PCR-based strategy: more tags and improved practical routines.
Yeast. 1999 Jul;15(10B):963-72
PMID: 10407276
-
Prophase microtubule arrays undergo flux-like behavior in mammalian cells.
Mol Biol Cell. 2007 Oct;18(10):3993-4002
PMID: 17671163
-
Proteomic analysis of the yeast mitochondrial outer membrane reveals accumulation of a subclass of preproteins.
Mol Biol Cell. 2006 Mar;17(3):1436-50
PMID: 16407407
-
Selective photolabeling of proteins using photoactivatable GFP.
Methods. 2004 Apr;32(4):445-50
PMID: 15003607
-
The yeast gene ERG6 is required for normal membrane function but is not essential for biosynthesis of the cell-cycle-sparking sterol.
Mol Cell Biol. 1989 Aug;9(8):3447-56
PMID: 2677674
-
Mutations in LIS1 (ERG6) gene confer increased sodium and lithium uptake in Saccharomyces cerevisiae.
Biochim Biophys Acta. 1994 Jul 13;1193(1):107-17
PMID: 8038180
-
A guide to choosing fluorescent proteins.
Nat Methods. 2005 Dec;2(12):905-9
PMID: 16299475
-
Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae.
Yeast. 1998 Jul;14(10):953-61
PMID: 9717241
-
EosFP, a fluorescent marker protein with UV-inducible green-to-red fluorescence conversion.
Proc Natl Acad Sci U S A. 2004 Nov 9;101(45):15905-10
PMID: 15505211
-
Biochemical and physiological effects of sterol alterations in yeast--a review.
Lipids. 1995 Mar;30(3):227-30
PMID: 7791530
-
Tracking intracellular protein movements using photoswitchable fluorescent proteins PS-CFP2 and Dendra2.
Nat Protoc. 2007;2(8):2024-32
PMID: 17703215
-
A photoactivatable GFP for selective photolabeling of proteins and cells.
Science. 2002 Sep 13;297(5588):1873-7
PMID: 12228718
-
Fluorescent proteins for photoactivation experiments.
Methods Cell Biol. 2008;85:45-61
PMID: 18155458
-
Yeast mitochondrial division and distribution require the cortical num1 protein.
Dev Cell. 2007 Mar;12(3):363-75
PMID: 17336903
-
Yeast Num1p associates with the mother cell cortex during S/G2 phase and affects microtubular functions.
J Cell Biol. 1995 Nov;131(4):1003-14
PMID: 7490278
-
The cortical protein Num1p is essential for dynein-dependent interactions of microtubules with the cortex.
J Cell Biol. 2000 Dec 11;151(6):1337-44
PMID: 11121446