Home LiteratureArticle Details
PMID: 1871128 Published · ppublish English Journal Article

Identification and purification of a factor that binds to the Mlu I cell cycle box of yeast DNA replication genes.

Verma R, Patapoutian A, Gordon CB, Campbell JL

Abstract

In Saccharomyces cerevisiae, the genes encoding at least 10 enzymes involved in DNA replication are periodically expressed in the late G1 and S phases of the cell cycle. All of these genes have one copy or more of the sequence ACGCGT, which conforms to the recognition site for the Mlu I restriction endonuclease. For the CDC21, CDC9, and POL1 genes, the Mlu I site has been shown to be absolutely required for periodic transcription. Using nuclear extracts fractionated by conventional and oligonucleotide affinity chromatography, we have purified a 17-kDa protein that recognizes the Mlu I motif. Synthetic oligonucleotides containing mutated Mlu I sites do not bind the protein. In contrast, synthetic oligonucleotides derived from the CDC2, CDC6, and CDC21 genes, which are expressed with the same timing as POL1, bind purified protein efficiently.

MeSH Terms
Bacterial Proteins Base Sequence Carrier Proteins/isolation & purification,metabolism Cell Cycle/genetics Cell Nucleus/physiology DNA Polymerase I/genetics DNA Replication Deoxyribonuclease I Deoxyribonucleases, Type II Site-Specific Fungal Proteins/genetics Genes, Fungal Molecular Sequence Data Oligonucleotide Probes Restriction Mapping Saccharomyces cerevisiae/cytology,genetics,metabolism Transcription, Genetic
Chemicals
Bacterial Proteins Carrier Proteins Fungal Proteins Oligonucleotide Probes DNA Polymerase I endodeoxyribonuclease MluI Deoxyribonuclease I Deoxyribonucleases, Type II Site-Specific
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Verma R
Braun Laboratories, California Institute of Technology, Pasaden 91125.
Patapoutian A
Gordon C B
Campbell J L
References (29)
29 references, click to expand
  1. The CDC8 transcript is cell cycle regulated in yeast and is expressed coordinately with CDC9 and CDC21 at a point preceding histone transcription.
    Exp Cell Res. 1987 Jul;171(1):223-31 PMID: 3305044
  2. Cell cycle-dependent expression of thymidylate synthase in Saccharomyces cerevisiae.
    Mol Cell Biol. 1984 Dec;4(12):2858-64 PMID: 6396509
  3. Affinity purification of sequence-specific DNA binding proteins.
    Proc Natl Acad Sci U S A. 1986 Aug;83(16):5889-93 PMID: 3461465
  4. A repetitive DNA sequence that confers cell-cycle START (CDC28)-dependent transcription of the HO gene in yeast.
    Cell. 1985 Aug;42(1):225-35 PMID: 3893742
  5. Protein kinase activity associated with the product of the yeast cell division cycle gene CDC28.
    Proc Natl Acad Sci U S A. 1985 Jun;82(12):4055-9 PMID: 3889921
  6. Molecular cloning, structure and expression of the yeast proliferating cell nuclear antigen gene.
    Nucleic Acids Res. 1990 Jan 25;18(2):261-5 PMID: 1970160
  7. Regulation of cell cycle-dependent gene expression in yeast.
    J Biol Chem. 1990 Aug 25;265(24):14057-60 PMID: 2201678
  8. Two genes differentially regulated in the cell cycle and by DNA-damaging agents encode alternative regulatory subunits of ribonucleotide reductase.
    Genes Dev. 1990 May;4(5):740-51 PMID: 2199320
  9. The isolation of new DNA synthesis mutants in the yeast Saccharomyces cerevisiae.
    Mol Gen Genet. 1982;186(3):439-44 PMID: 6750322
  10. A gel electrophoresis method for quantifying the binding of proteins to specific DNA regions: application to components of the Escherichia coli lactose operon regulatory system.
    Nucleic Acids Res. 1981 Jul 10;9(13):3047-60 PMID: 6269071
  11. Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis.
    Nucleic Acids Res. 1981 Dec 11;9(23):6505-25 PMID: 6275366
  12. Molecular analysis of a cell lineage.
    Nature. 1983 Apr 21;302(5910):670-6 PMID: 6339953
  13. Coordination of growth with cell division in the yeast Saccharomyces cerevisiae.
    Exp Cell Res. 1977 Mar 1;105(1):79-98 PMID: 320023
  14. Ribonucleotide reductase activity during the cell cycle of Saccharomyces cerevisiae.
    Arch Biochem Biophys. 1973 Sep;158(1):177-84 PMID: 4580840
  15. Characterization of a short, cis-acting DNA sequence which conveys cell cycle stage-dependent transcription in Saccharomyces cerevisiae.
    Mol Cell Biol. 1991 Jan;11(1):329-37 PMID: 1986229
  16. A cell cycle-responsive transcriptional control element and a negative control element in the gene encoding DNA polymerase alpha in Saccharomyces cerevisiae.
    Proc Natl Acad Sci U S A. 1991 Jul 15;88(14):6058-62 PMID: 2068085
  17. The CDC7 protein of Saccharomyces cerevisiae is a phosphoprotein that contains protein kinase activity.
    Proc Natl Acad Sci U S A. 1991 May 1;88(9):3574-8 PMID: 2023904
  18. Coordination of expression of DNA synthesis genes in budding yeast by a cell-cycle regulated trans factor.
    Nature. 1991 Mar 21;350(6315):247-50 PMID: 2005980
  19. CDC6 mRNA fluctuates periodically in the yeast cell cycle.
    J Biol Chem. 1990 Nov 15;265(32):19904-9 PMID: 2246267
  20. Transcriptional regulation of the cell cycle-dependent thymidylate synthase gene of Saccharomyces cerevisiae.
    Mol Cell Biol. 1988 Nov;8(11):4616-24 PMID: 3062362
  21. Affinity labeling of the active center and ribonucleoside triphosphate binding site of yeast DNA primase.
    J Biol Chem. 1989 Feb 5;264(4):2189-94 PMID: 2644256
  22. The nucleotide sequence of the PRI1 gene related to DNA primase in Saccharomyces cerevisiae.
    Nucleic Acids Res. 1987 Oct 12;15(19):7975-89 PMID: 3313275
  23. Regulation of CDC9, the Saccharomyces cerevisiae gene that encodes DNA ligase.
    Mol Cell Biol. 1985 Jan;5(1):226-35 PMID: 3885010
  24. The nucleotide sequence of the DNA ligase gene (CDC9) from Saccharomyces cerevisiae: a gene which is cell-cycle regulated and induced in response to DNA damage.
    Nucleic Acids Res. 1985 Dec 9;13(23):8323-37 PMID: 3909103
  25. Use of a protein-blotting procedure and a specific DNA probe to identify nuclear proteins that recognize the promoter region of the transferrin receptor gene.
    Proc Natl Acad Sci U S A. 1985 Oct;82(20):6741-4 PMID: 2995982
  26. Purification and characterization of proteins that bind to yeast ARSs.
    J Biol Chem. 1988 Nov 25;263(33):17270-7 PMID: 3053706
  27. DNA polymerase I gene of Saccharomyces cerevisiae: nucleotide sequence, mapping of a temperature-sensitive mutation, and protein homology with other DNA polymerases.
    Proc Natl Acad Sci U S A. 1988 Jun;85(11):3772-6 PMID: 3287376
  28. Isolation, DNA sequence and regulation of a new cell division cycle gene from the yeast Saccharomyces cerevisiae.
    Yeast. 1989 Nov-Dec;5(6):509-24 PMID: 2694679
  29. Cell cycle control of the yeast HO gene: cis- and trans-acting regulators.
    Cell. 1987 Feb 13;48(3):389-97 PMID: 3542227
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1991-08-15
Pages
7155-9
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC52252
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com