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PMID: 18682362 Published · ppublish English Journal Article Review

Microfluidic single-cell analysis of intracellular compounds.

Journal of the Royal Society, Interface ·Vol. 5 Suppl 2 ·2008-10-06 ·Pages S139-50

Chao TC, Ros A

Abstract

Biological analyses traditionally probe cell ensembles in the range of 103-106 cells, thereby completely averaging over relevant individual cell responses, such as differences in cell proliferation, responses to external stimuli or disease onset. In past years, this fact has been realized and increasing interest has evolved for single-cell analytical methods, which could give exciting new insights into genomics, proteomics, transcriptomics and systems biology. Microfluidic or lab-on-a-chip devices are the method of choice for single-cell analytical tools as they allow the integration of a variety of necessary process steps involved in single-cell analysis, such as selection, navigation, positioning or lysis of single cells as well as separation and detection of cellular analytes. Along with this advantageous integration, microfluidic devices confine single cells in compartments near their intrinsic volume, thus minimizing dilution effects and increasing detection sensitivity. This review overviews the developments and achievements of microfluidic single-cell analysis of intracellular compounds in the past few years, from proof-of-principle devices to applications demonstrating a high biological relevance.

MeSH Terms
Amino Acids/analysis Cell Fractionation Cell Separation Cells/chemistry DNA/analysis Electric Impedance Electroporation Fluorescent Dyes/analysis Microfluidic Analytical Techniques Proteins/analysis RNA/analysis
Chemicals
Amino Acids Fluorescent Dyes Proteins RNA DNA
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Chao Tzu-Chiao
Department of Chemistry and Biochemistry, Arizona State University, Box 871604, Tempe, AZ 85287-1604, USA.
Ros Alexandra
References (67)
67 references, click to expand
  1. Recent advances in capillary electrophoretic analysis of individual cells.
    Anal Bioanal Chem. 2007 Jan;387(1):51-7 PMID: 16912862
  2. Microfluidic device for cell capture and impedance measurement.
    Biomed Microdevices. 2007 Oct;9(5):737-43 PMID: 17508285
  3. Dielectric spectroscopy in a micromachined flow cytometer: theoretical and practical considerations.
    Lab Chip. 2004 Jun;4(3):241-51 PMID: 15159786
  4. High-sensitivity laser-induced fluorescence detection of native proteins in capillary electrophoresis.
    J Chromatogr. 1992 Mar 20;595(1-2):319-25 PMID: 1577911
  5. Single-cell electroporation arrays with real-time monitoring and feedback control.
    Lab Chip. 2007 Apr;7(4):457-62 PMID: 17389961
  6. Single-cell chemical lysis in picoliter-scale closed volumes using a microfabricated device.
    Anal Chem. 2004 Oct 15;76(20):6137-43 PMID: 15481964
  7. Dynamics of single-cell gene expression.
    Mol Syst Biol. 2006;2:64 PMID: 17130866
  8. Real-time monitoring of intracellular calcium dynamic mobilization of a single cardiomyocyte in a microfluidic chip pertaining to drug discovery.
    Electrophoresis. 2007 Dec;28(24):4723-33 PMID: 18072214
  9. Microfluidic device for single-cell analysis.
    Anal Chem. 2003 Jul 15;75(14):3581-6 PMID: 14570213
  10. Micro total analysis systems. 2. Analytical standard operations and applications.
    Anal Chem. 2002 Jun 15;74(12):2637-52 PMID: 12090654
  11. Micro total analysis systems. Recent developments.
    Anal Chem. 2004 Jun 15;76(12):3373-85 PMID: 15193114
  12. Impedance spectroscopy using maximum length sequences: application to single cell analysis.
    Rev Sci Instrum. 2007 May;78(5):054301 PMID: 17552843
  13. Mass spectrometric imaging of peptide release from neuronal cells within microfluidic devices.
    Lab Chip. 2007 Nov;7(11):1454-60 PMID: 17960271
  14. Detection of DNA fragmentation in a single apoptotic cardiomyocyte by electrophoresis on a microfluidic device.
    Electrophoresis. 2003 Nov;24(21):3778-83 PMID: 14613205
  15. Sonoporation of suspension cells with a single cavitation bubble in a microfluidic confinement.
    Lab Chip. 2007 Dec;7(12):1666-72 PMID: 18030385
  16. Microtechnologies and nanotechnologies for single-cell analysis.
    Curr Opin Biotechnol. 2004 Feb;15(1):44-9 PMID: 15102465
  17. Chemical analysis of single mammalian cells with microfluidics. Strategies for culturing, sorting, trapping, and lysing cells and separating their contents on chips.
    Anal Chem. 2007 Apr 1;79(7):2614-21 PMID: 17476726
  18. A microfluidic processor for gene expression profiling of single human embryonic stem cells.
    Lab Chip. 2008 Jan;8(1):68-74 PMID: 18094763
  19. Microfluidic selection and retention of a single cardiac myocyte, on-chip dye loading, cell contraction by chemical stimulation, and quantitative fluorescent analysis of intracellular calcium.
    Anal Chem. 2005 Jul 15;77(14):4315-22 PMID: 16013841
  20. Characterization of cellular chemical dynamics using combined microfluidic and Raman techniques.
    Anal Bioanal Chem. 2008 Feb;390(3):833-40 PMID: 17849101
  21. Improved native UV laser induced fluorescence detection for single cell analysis in poly(dimethylsiloxane) microfluidic devices.
    J Chromatogr A. 2006 Oct 20;1130(2):195-200 PMID: 16814305
  22. Single-cell analysis by capillary electrophoresis.
    Anal Bioanal Chem. 2003 Jan;375(1):28-9 PMID: 12520431
  23. Picomolar analysis of proteins using electrophoretically mediated microanalysis and capillary electrophoresis with laser-induced fluorescence detection.
    Anal Chem. 1998 Nov 1;70(21):4546-8 PMID: 9823714
  24. Bacterial chromosome extraction and isolation.
    Lab Chip. 2002 Nov;2(4):207-12 PMID: 15100812
  25. Capillary electrophoresis of single mammalian cells.
    Electrophoresis. 2004 May;25(9):1181-7 PMID: 15174037
  26. Nanoliter reactors improve multiple displacement amplification of genomes from single cells.
    PLoS Genet. 2007 Sep;3(9):1702-8 PMID: 17892324
  27. Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth.
    Proc Natl Acad Sci U S A. 2007 Jul 17;104(29):11889-94 PMID: 17620602
  28. Single-cell manipulation and analysis using microfluidic devices.
    Anal Bioanal Chem. 2007 Jan;387(1):9-12 PMID: 16955261
  29. Microfluidic systems in proteomics.
    Electrophoresis. 2003 Nov;24(21):3533-62 PMID: 14613180
  30. Integrating whole transcriptome assays on a lab-on-a-chip for single cell gene profiling.
    Lab Chip. 2008 Mar;8(3):443-50 PMID: 18305863
  31. Microfluidic devices fabricated in poly(dimethylsiloxane) for biological studies.
    Electrophoresis. 2003 Nov;24(21):3563-76 PMID: 14613181
  32. Novel multi-depth microfluidic chip for single cell analysis.
    J Chromatogr A. 2006 Jun 9;1117(2):228-33 PMID: 16620849
  33. Impedance spectroscopy flow cytometry: on-chip label-free cell differentiation.
    Cytometry A. 2005 Jun;65(2):124-32 PMID: 15825181
  34. Impedimetric and optical interrogation of single cells in a microfluidic device for real-time viability and chemical response assessment.
    Biosens Bioelectron. 2008 Jan 18;23(6):845-51 PMID: 17933506
  35. Single-cell analysis by electrochemical detection with a microfluidic device.
    J Chromatogr A. 2005 Jan 21;1063(1-2):227-33 PMID: 15700475
  36. Monolithic microfabricated valves and pumps by multilayer soft lithography.
    Science. 2000 Apr 7;288(5463):113-6 PMID: 10753110
  37. Microfabrication and microfluidics for tissue engineering: state of the art and future opportunities.
    Lab Chip. 2004 Apr;4(2):98-103 PMID: 15052347
  38. Dynamic single-cell analysis for quantitative biology.
    Anal Chem. 2006 Dec 1;78(23):7918-25 PMID: 17186633
  39. Bioanalysis in structured microfluidic systems.
    Electrophoresis. 2006 Jul;27(13):2651-8 PMID: 16817165
  40. Microfluidic digital PCR enables multigene analysis of individual environmental bacteria.
    Science. 2006 Dec 1;314(5804):1464-7 PMID: 17138901
  41. On-line concentration and separation of proteins by capillary electrophoresis using polymer solutions.
    Anal Chem. 2000 Oct 15;72(20):4805-11 PMID: 11055693
  42. Quantitative chemical analysis of single cells.
    Annu Rev Biophys Biomol Struct. 2000;29:239-63 PMID: 10940249
  43. Chemical cytometry on a picoliter-scale integrated microfluidic chip.
    Proc Natl Acad Sci U S A. 2004 Aug 31;101(35):12809-13 PMID: 15328405
  44. Gene transfer and protein dynamics in stem cells using single cell electroporation in a microfluidic device.
    Lab Chip. 2008 Jan;8(1):62-7 PMID: 18094762
  45. A nanoliter-scale nucleic acid processor with parallel architecture.
    Nat Biotechnol. 2004 Apr;22(4):435-9 PMID: 15024389
  46. Micro-separation toward systems biology.
    J Chromatogr A. 2006 Feb 17;1106(1-2):19-28 PMID: 16236294
  47. Single cell manipulation, analytics, and label-free protein detection in microfluidic devices for systems nanobiology.
    Electrophoresis. 2005 Oct;26(19):3689-96 PMID: 16152668
  48. Microfabricated system for parallel single-cell capillary electrophoresis.
    Anal Chem. 2004 Sep 1;76(17):4983-9 PMID: 15373432
  49. A single cell electroporation chip.
    Lab Chip. 2005 Jan;5(1):38-43 PMID: 15616738
  50. Counting low-copy number proteins in a single cell.
    Science. 2007 Jan 5;315(5808):81-4 PMID: 17204646
  51. Integration of single cell injection, cell lysis, separation and detection of intracellular constituents on a microfluidic chip.
    Lab Chip. 2004 Feb;4(1):47-52 PMID: 15007440
  52. Determination of reactive oxygen species in single human erythrocytes using microfluidic chip electrophoresis.
    Anal Bioanal Chem. 2005 Aug;382(7):1472-6 PMID: 15997375
  53. Simultaneous determination of glutathione and reactive oxygen species in individual cells by microchip electrophoresis.
    Electrophoresis. 2005 Dec;26(24):4759-66 PMID: 16278919
  54. Capillary zone electrophoresis with electrochemical detection in 12.7 microns diameter columns.
    Anal Chem. 1988 Sep 15;60(18):1972-5 PMID: 3228199
  55. Microfluidic single-cell mRNA isolation and analysis.
    Anal Chem. 2006 May 1;78(9):3084-9 PMID: 16642997
  56. Single-cell enzyme concentrations, kinetics, and inhibition analysis using high-density hydrodynamic cell isolation arrays.
    Anal Chem. 2006 Jul 15;78(14):4925-30 PMID: 16841912
  57. Micro total analysis systems. 1. Introduction, theory, and technology.
    Anal Chem. 2002 Jun 15;74(12):2623-36 PMID: 12090653
  58. Micromachined impedance spectroscopy flow cytometer for cell analysis and particle sizing.
    Lab Chip. 2001 Sep;1(1):76-82 PMID: 15100895
  59. Optical and electrochemical detection techniques for cell-based microfluidic systems.
    Anal Bioanal Chem. 2006 Mar;384(6):1259-68 PMID: 16795144
  60. Microfluidic device for electric field-driven single-cell capture and activation.
    Anal Chem. 2005 Nov 1;77(21):6935-41 PMID: 16255592
  61. Electrophoresis-assisted single-cell electroporation for efficient intracellular delivery.
    Biomed Microdevices. 2008 Feb;10(1):113-6 PMID: 17828458
  62. Analysis of single mammalian cells on-chip.
    Lab Chip. 2007 Apr;7(4):423-40 PMID: 17389958
  63. Microcolumn separations and the analysis of single cells.
    Science. 1989 Oct 6;246(4926):57-63 PMID: 2675314
  64. Microfluidic devices for the high-throughput chemical analysis of cells.
    Anal Chem. 2003 Nov 1;75(21):5646-55 PMID: 14588001
  65. Subnanomolar detection limit for sodium dodecyl sulfate-capillary gel electrophoresis using a fluorogenic, noncovalent dye.
    Electrophoresis. 1998 Sep;19(12):2169-74 PMID: 9761199
  66. Soft Lithography.
    Angew Chem Int Ed Engl. 1998 Mar 16;37(5):550-575 PMID: 29711088
  67. Electrophoretic cell manipulation and electrochemical gene-function analysis based on a yeast two-hybrid system in a microfluidic device.
    Anal Chem. 2008 May 15;80(10):3722-7 PMID: 18363337
Article Info
Journal
Journal of the Royal Society, Interface
Abbr.
J R Soc Interface
ISSN
1742-5689
Published
2008-10-06
Pages
S139-50
Language
English
Region
England
NLM ID
101217269
PMCID
PMC2706030
Subset
IM
Analysis Services
Analysis Services

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