Home LiteratureArticle Details
PMID: 1830649 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Genetic depletion indicates a late role for U5 snRNP during in vitro spliceosome assembly.

Nucleic acids research ·Vol. 19 ·No. 14 ·1991-07-25 ·Pages 3857-60

Séraphin B, Abovich N, Rosbash M

Abstract

The pre-mRNA splicing pathway is highly conserved from yeast (S. cerevisiae) to mammals. Of the four snRNPs involved in splicing three (U1, U2 and U4/U6) have been shown to be essential for in vitro splicing. To examine the remaining snRNP, we utilized our previously described genetic procedures (Seraphin and Rosbash, 1989) to prepare yeast extracts depleted of U5 snRNP. The results show that U5 snRNP is necessary for both steps of pre- mRNA splicing and for proper spliceosome assembly, i.e., addition of the U4/U5/U6 triple snRNP. The prior steps of U1 and U2 snRNP addition occur normally in the absence of U5 snRNP.

Related Genes
U5
MeSH Terms
Blotting, Northern Centrifugation Genetic Complementation Test RNA Precursors/metabolism RNA Splicing RNA, Fungal/metabolism Ribonucleoproteins/genetics,physiology Ribonucleoproteins, Small Nuclear Saccharomyces cerevisiae/genetics
Chemicals
RNA Precursors RNA, Fungal Ribonucleoproteins Ribonucleoproteins, Small Nuclear
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Séraphin B
Howard Hughes Medical Institute, Department of Biology, Brandeis University, Waltham, MA 02254.
Abovich N
Rosbash M
References (34)
34 references, click to expand
  1. The yeast branchpoint sequence is not required for the formation of a stable U1 snRNA-pre-mRNA complex and is recognized in the absence of U2 snRNA.
    EMBO J. 1991 May;10(5):1209-16 PMID: 1827069
  2. The 5' terminus of the RNA moiety of U1 small nuclear ribonucleoprotein particles is required for the splicing of messenger RNA precursors.
    Cell. 1984 Aug;38(1):299-307 PMID: 6235919
  3. Universally conserved and yeast-specific U1 snRNA sequences are important but not essential for U1 snRNP function.
    Genes Dev. 1990 Oct;4(10):1766-74 PMID: 2147421
  4. The yeast PRP6 gene encodes a U4/U6 small nuclear ribonucleoprotein particle (snRNP) protein, and the PRP9 gene encodes a protein required for U2 snRNP binding.
    Mol Cell Biol. 1990 Dec;10(12):6417-25 PMID: 2147224
  5. Sequence-specific affinity selection of mammalian splicing complexes.
    Nucleic Acids Res. 1990 Dec 25;18(24):7373-9 PMID: 2147994
  6. Multiple interactions between the splicing substrate and small nuclear ribonucleoproteins in spliceosomes.
    Mol Cell Biol. 1987 Jan;7(1):281-93 PMID: 2951586
  7. Multiple factors including the small nuclear ribonucleoproteins U1 and U2 are necessary for pre-mRNA splicing in vitro.
    Cell. 1985 Oct;42(3):725-36 PMID: 2996774
  8. The 3' splice site of pre-messenger RNA is recognized by a small nuclear ribonucleoprotein.
    Science. 1985 Dec 20;230(4732):1344-9 PMID: 2933810
  9. Spliceosome assembly involves the binding and release of U4 small nuclear ribonucleoprotein.
    Proc Natl Acad Sci U S A. 1988 Jan;85(2):411-5 PMID: 2963332
  10. Affinity chromatography of splicing complexes: U2, U5, and U4 + U6 small nuclear ribonucleoprotein particles in the spliceosome.
    Science. 1986 Sep 19;233(4770):1294-9 PMID: 3638792
  11. Pre-mRNA splicing.
    Annu Rev Genet. 1986;20:671-708 PMID: 2880558
  12. Cloning of the RNA8 gene of Saccharomyces cerevisiae, detection of the RNA8 protein, and demonstration that it is essential for nuclear pre-mRNA splicing.
    Mol Cell Biol. 1988 Mar;8(3):1067-75 PMID: 2835658
  13. An early hierarchic role of U1 small nuclear ribonucleoprotein in spliceosome assembly.
    Science. 1988 Nov 18;242(4881):1028-35 PMID: 2973660
  14. Different small nuclear ribonucleoprotein particles are involved in different steps of splicing complex formation.
    Cold Spring Harb Symp Quant Biol. 1987;52:287-98 PMID: 2969789
  15. Spliceosomal snRNAs.
    Annu Rev Genet. 1988;22:387-419 PMID: 2977088
  16. Spliceosome assembly in yeast.
    Genes Dev. 1987 Nov;1(9):1014-27 PMID: 2962902
  17. Identification of a yeast snRNP protein and detection of snRNP-snRNP interactions.
    Cell. 1987 Dec 24;51(6):1019-26 PMID: 2961458
  18. U2 as well as U1 small nuclear ribonucleoproteins are involved in premessenger RNA splicing.
    Cell. 1985 Oct;42(3):737-50 PMID: 2996775
  19. Interactions between small nuclear ribonucleoprotein particles in formation of spliceosomes.
    Cell. 1987 Jun 19;49(6):763-74 PMID: 2953438
  20. An ordered pathway of snRNP binding during mammalian pre-mRNA splicing complex assembly.
    EMBO J. 1987 Aug;6(8):2415-24 PMID: 2959470
  21. A U1 snRNA:pre-mRNA base pairing interaction is required early in yeast spliceosome assembly but does not uniquely define the 5' cleavage site.
    EMBO J. 1988 Aug;7(8):2533-8 PMID: 3056718
  22. Early commitment of yeast pre-mRNA to the spliceosome pathway.
    Mol Cell Biol. 1988 Sep;8(9):3755-60 PMID: 3065622
  23. Antisense probing of the human U4/U6 snRNP with biotinylated 2'-OMe RNA oligonucleotides.
    Cell. 1989 Nov 3;59(3):531-9 PMID: 2478298
  24. Pre-mRNA splicing in vitro requires intact U4/U6 small nuclear ribonucleoprotein.
    Cell. 1986 Aug 29;46(5):697-704 PMID: 2427202
  25. In vitro assembly of yeast U6 snRNP: a functional assay.
    Genes Dev. 1989 Dec;3(12B):2137-50 PMID: 2560755
  26. In vitro reconstitution of functional yeast U2 snRNPs.
    Genes Dev. 1989 Dec;3(12B):2124-36 PMID: 2560754
  27. U5 small nuclear ribonucleoprotein: RNA structure analysis and ATP-dependent interaction with U4/U6.
    Mol Cell Biol. 1989 Aug;9(8):3350-9 PMID: 2552294
  28. Evidence from complementation assays in vitro that U5 snRNP is required for both steps of mRNA splicing.
    EMBO J. 1989 Oct;8(10):3105-12 PMID: 2531074
  29. Identification of functional U1 snRNA-pre-mRNA complexes committed to spliceosome assembly and splicing.
    Cell. 1989 Oct 20;59(2):349-58 PMID: 2529976
  30. PRP4: a protein of the yeast U4/U6 small nuclear ribonucleoprotein particle.
    Mol Cell Biol. 1989 Sep;9(9):3710-9 PMID: 2528687
  31. An essential yeast snRNA with a U5-like domain is required for splicing in vivo.
    Cell. 1987 Jun 5;49(5):613-24 PMID: 3555841
  32. Electrophoresis of ribonucleoproteins reveals an ordered assembly pathway of yeast splicing complexes.
    Nature. 1986 Nov 27-Dec 3;324(6095):341-5 PMID: 3537805
  33. Specific small nuclear RNAs are associated with yeast spliceosomes.
    Cell. 1986 Jun 20;45(6):869-77 PMID: 3518951
  34. Mutations in yeast U5 snRNA alter the specificity of 5' splice-site cleavage.
    Cell. 1991 Apr 5;65(1):115-23 PMID: 2013092
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1991-07-25
Pages
3857-60
Language
English
Region
England
NLM ID
0411011
PMCID
PMC328474
Subset
IM
Grants
NIGMS NIH HHS · GM23549 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com