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PMID: 18177895 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Role of intrinsic flexibility in signal transduction mediated by the cell cycle regulator, p27 Kip1.

Journal of molecular biology ·Vol. 376 ·No. 3 ·2008-02-22 ·Pages 827-38

Galea CA, Nourse A, Wang Y, Sivakolundu SG, Heller WT, Kriwacki RW

Abstract

p27(Kip1) (p27), which controls eukaryotic cell division through interactions with cyclin-dependent kinases (Cdks), integrates and transduces promitogenic signals from various nonreceptor tyrosine kinases by orchestrating its own phosphorylation, ubiquitination and degradation. Intrinsic flexibility allows p27 to act as a "conduit" for sequential signaling mediated by tyrosine and threonine phosphorylation and ubiquitination. While the structural features of the Cdk/cyclin-binding domain of p27 are understood, how the C-terminal regulatory domain coordinates multistep signaling leading to p27 degradation is poorly understood. We show that the 100-residue p27 C-terminal domain is extended and flexible when p27 is bound to Cdk2/cyclin A. We propose that the intrinsic flexibility of p27 provides a molecular basis for the sequential signal transduction conduit that regulates p27 degradation and cell division. Other intrinsically unstructured proteins possessing multiple sites of posttranslational modification may participate in similar signaling conduits.

MeSH Terms
Cyclin A/metabolism Cyclin-Dependent Kinase 2/metabolism Cyclin-Dependent Kinase Inhibitor p27 Intracellular Signaling Peptides and Proteins/chemistry,metabolism Models, Molecular Nuclear Magnetic Resonance, Biomolecular Phosphorylation Signal Transduction
Chemicals
CDKN1B protein, human Cyclin A Intracellular Signaling Peptides and Proteins Cyclin-Dependent Kinase Inhibitor p27 CDK2 protein, human Cyclin-Dependent Kinase 2
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Galea Charles A
Department of Structural Biology, St. Jude Children's Research Hospital, 332 North Lauderdale St., Memphis, TN 38105, USA.
Nourse Amanda
Wang Yuefeng
Sivakolundu Sivashankar G
Heller William T
Kriwacki Richard W
References (37)
37 references, click to expand
  1. Translational control of p27Kip1 accumulation during the cell cycle.
    Science. 1996 Mar 29;271(5257):1861-4 PMID: 8596954
  2. 1H, 13C, and 15N NMR backbone assignments and secondary structure of human interferon-gamma.
    Biochemistry. 1992 Sep 8;31(35):8180-90 PMID: 1525157
  3. Further insights into calmodulin-myosin light chain kinase interaction from solution scattering and shape restoration.
    Biochemistry. 2003 Sep 16;42(36):10579-88 PMID: 12962481
  4. p27, a novel inhibitor of G1 cyclin-Cdk protein kinase activity, is related to p21.
    Cell. 1994 Jul 15;78(1):67-74 PMID: 8033213
  5. p27Kip1, a cyclin-Cdk inhibitor, links transforming growth factor-beta and contact inhibition to cell cycle arrest.
    Genes Dev. 1994 Jan;8(1):9-22 PMID: 8288131
  6. Regulation of the cdk inhibitor p27 and its deregulation in cancer.
    J Cell Physiol. 2000 Apr;183(1):10-7 PMID: 10699961
  7. NMRPipe: a multidimensional spectral processing system based on UNIX pipes.
    J Biomol NMR. 1995 Nov;6(3):277-93 PMID: 8520220
  8. Molecular dissection of the interaction between p27 and Kip1 ubiquitylation-promoting complex, the ubiquitin ligase that regulates proteolysis of p27 in G1 phase.
    J Biol Chem. 2005 May 6;280(18):17694-700 PMID: 15746103
  9. MOLMOL: a program for display and analysis of macromolecular structures.
    J Mol Graph. 1996 Feb;14(1):51-5, 29-32 PMID: 8744573
  10. Role of the ubiquitin-proteasome pathway in regulating abundance of the cyclin-dependent kinase inhibitor p27.
    Science. 1995 Aug 4;269(5224):682-5 PMID: 7624798
  11. Crystal structure of the p27Kip1 cyclin-dependent-kinase inhibitor bound to the cyclin A-Cdk2 complex.
    Nature. 1996 Jul 25;382(6589):325-31 PMID: 8684460
  12. Regulation of p27 degradation and S-phase progression by Ro52 RING finger protein.
    Mol Cell Biol. 2006 Aug;26(16):5994-6004 PMID: 16880511
  13. Structural basis of the Cks1-dependent recognition of p27(Kip1) by the SCF(Skp2) ubiquitin ligase.
    Mol Cell. 2005 Oct 7;20(1):9-19 PMID: 16209941
  14. Docking interactions in protein kinase and phosphatase networks.
    Curr Opin Struct Biol. 2006 Dec;16(6):676-85 PMID: 17079133
  15. Self-assembled colloidal crystals from ZrO2 nanoparticles.
    J Phys Chem B. 2006 Oct 5;110(39):19456-60 PMID: 17004805
  16. Building hydrodynamic bead-shell models for rigid bioparticles of arbitrary shape.
    Biophys Chem. 2001 Dec 25;94(3):265-74 PMID: 11804736
  17. Inhibitors of the Cip/Kip family.
    Curr Top Microbiol Immunol. 1998;227:25-41 PMID: 9479824
  18. CDK inhibitors: positive and negative regulators of G1-phase progression.
    Genes Dev. 1999 Jun 15;13(12):1501-12 PMID: 10385618
  19. Disordered p27Kip1 exhibits intrinsic structure resembling the Cdk2/cyclin A-bound conformation.
    J Mol Biol. 2005 Nov 11;353(5):1118-28 PMID: 16214166
  20. Solution NMR studies of an intrinsically unstructured protein within a dilute, 75 kDa eukaryotic protein assembly; probing the practical limits for efficiently assigning polypeptide backbone resonances.
    Chembiochem. 2005 Dec;6(12):2242-6 PMID: 16270364
  21. Functional consequences of preorganized helical structure in the intrinsically disordered cell-cycle inhibitor p27(Kip1).
    Biochemistry. 2002 Jan 22;41(3):752-9 PMID: 11790096
  22. A two-state allosteric model for autoinhibition rationalizes WASP signal integration and targeting.
    J Mol Biol. 2004 Apr 23;338(2):271-85 PMID: 15066431
  23. Calculation of hydrodynamic properties of globular proteins from their atomic-level structure.
    Biophys J. 2000 Feb;78(2):719-30 PMID: 10653785
  24. Sedimentation equilibrium analysis of protein interactions with global implicit mass conservation constraints and systematic noise decomposition.
    Anal Biochem. 2004 Mar 15;326(2):234-56 PMID: 15003564
  25. Cytoplasmic ubiquitin ligase KPC regulates proteolysis of p27(Kip1) at G1 phase.
    Nat Cell Biol. 2004 Dec;6(12):1229-35 PMID: 15531880
  26. Cdk-inhibitory activity and stability of p27Kip1 are directly regulated by oncogenic tyrosine kinases.
    Cell. 2007 Jan 26;128(2):269-80 PMID: 17254966
  27. Deregulated degradation of the cdk inhibitor p27 and malignant transformation.
    Semin Cancer Biol. 2003 Feb;13(1):41-7 PMID: 12507555
  28. p27 phosphorylation by Src regulates inhibition of cyclin E-Cdk2.
    Cell. 2007 Jan 26;128(2):281-94 PMID: 17254967
  29. Molecular-weight determination by light scattering.
    J Phys Colloid Chem. 1947 Jan;51(1):18-32 PMID: 20286386
  30. Influence of multiple well defined conformations on small-angle scattering of proteins in solution.
    Acta Crystallogr D Biol Crystallogr. 2005 Jan;61(Pt 1):33-44 PMID: 15608373
  31. Linear motifs: evolutionary interaction switches.
    FEBS Lett. 2005 Jun 13;579(15):3342-5 PMID: 15943979
  32. p27 binds cyclin-CDK complexes through a sequential mechanism involving binding-induced protein folding.
    Nat Struct Mol Biol. 2004 Apr;11(4):358-64 PMID: 15024385
  33. Sequence-dependent correction of random coil NMR chemical shifts.
    J Am Chem Soc. 2001 Apr 4;123(13):2970-8 PMID: 11457007
  34. Structural studies of p21Waf1/Cip1/Sdi1 in the free and Cdk2-bound state: conformational disorder mediates binding diversity.
    Proc Natl Acad Sci U S A. 1996 Oct 15;93(21):11504-9 PMID: 8876165
  35. Principles of CDK regulation.
    Nature. 1995 Mar 9;374(6518):131-4 PMID: 7877684
  36. A cell cycle-regulated inhibitor of cyclin-dependent kinases.
    Proc Natl Acad Sci U S A. 1994 Jun 7;91(12):5291-5 PMID: 8202483
  37. Culture medium for enterobacteria.
    J Bacteriol. 1974 Sep;119(3):736-47 PMID: 4604283
Article Info
Journal
Journal of molecular biology
Abbr.
J Mol Biol
ISSN
1089-8638
Published
2008-02-22
Epub
2007-00-14
Pages
827-38
Language
English
Region
England
NLM ID
2985088R
PMCID
PMC2350195
Subset
IM
Grants
NCI NIH HHS · 5P30CA021765 · United States
NCI NIH HHS · R01 CA082491-02 · United States
NCI NIH HHS · R01 CA082491-05 · United States
NCI NIH HHS · 2R01CA082491 · United States
NCI NIH HHS · R01 CA082491-01A2 · United States
NCI NIH HHS · R01 CA082491-04 · United States
NCI NIH HHS · R01 CA082491-06A2 · United States
NCI NIH HHS · R01 CA082491-03 · United States
NCI NIH HHS · P30 CA021765 · United States
NCI NIH HHS · R01 CA082491 · United States
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