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PMID: 18093953 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Defects in XRCC4 and KU80 differentially affect the joining of distal nonhomologous ends.

Guirouilh-Barbat J, Rass E, Plo I, Bertrand P, Lopez BS

Abstract

XRCC4-null mice have a more severe phenotype than KU80-null mice. Here, we address whether this difference in phenotype is connected to nonhomologous end-joining (NHEJ). We used intrachromosomal substrates to monitor NHEJ of two distal double-strand breaks (DSBs) targeted by I-SceI, in living cells. In xrcc4-defective XR-1 cells, a residual but significant end-joining process exists, which primarily uses microhomologies distal from the DSB. However, NHEJ efficiency was strongly reduced in xrcc4-defective XR-1 cells versus complemented cells, contrasting with KU-deficient xrs6 cells, which showed levels of end-joining similar to those of complemented cells. Nevertheless, sequence analysis of the repair junctions indicated that the accuracy of end-joining was strongly affected in both xrcc4-deficient and KU-deficient cells. More specifically, these data showed that the KU80/XRCC4 pathway is conservative and not intrinsically error-prone but can accommodate non-fully complementary ends at the cost of limited mutagenesis.

MeSH Terms
Animals Antigens, Nuclear/genetics,physiology CD4-Positive T-Lymphocytes/metabolism CHO Cells Cricetinae Cricetulus DNA Damage DNA Repair DNA-Binding Proteins/genetics,physiology Flow Cytometry Gene Expression Regulation Genetic Complementation Test Ku Autoantigen Mice Mice, Transgenic Models, Genetic Phenotype
Chemicals
Antigens, Nuclear DNA-Binding Proteins XRCC4 protein, mouse Xrcc6 protein, mouse Ku Autoantigen
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Guirouilh-Barbat Josée
Commissariat à l'Energie Atomique, Unité Mixte de Recherche 217, Centre National de la Recherche Scientifique/Commissariat à l'Energie Atomique, Institut de Radiobiologie Cellulaire et Moléculaire, Fontenay aux Roses, France.
Rass Emilie
Plo Isabelle
Bertrand Pascale
Lopez Bernard S
References (44)
44 references, click to expand
  1. The double life of the Ku protein: facing the DNA breaks and the extracellular environment.
    Cell Cycle. 2005 Mar;4(3):438-41 PMID: 15738653
  2. Cell cycle and genetic requirements of two pathways of nonhomologous end-joining repair of double-strand breaks in Saccharomyces cerevisiae.
    Mol Cell Biol. 1996 May;16(5):2164-73 PMID: 8628283
  3. Yeast Mre11 and Rad1 proteins define a Ku-independent mechanism to repair double-strand breaks lacking overlapping end sequences.
    Mol Cell Biol. 2003 Dec;23(23):8820-8 PMID: 14612421
  4. XRCC4 in G1 suppresses homologous recombination in S/G2, in G1 checkpoint-defective cells.
    Oncogene. 2007 Apr 26;26(19):2769-80 PMID: 17057732
  5. DNA-dependent protein kinase and XRCC4-DNA ligase IV mobilization in the cell in response to DNA double strand breaks.
    J Biol Chem. 2005 Feb 25;280(8):7060-9 PMID: 15520013
  6. Involvement of poly(ADP-ribose) polymerase-1 and XRCC1/DNA ligase III in an alternative route for DNA double-strand breaks rejoining.
    J Biol Chem. 2004 Dec 31;279(53):55117-26 PMID: 15498778
  7. A model of oncogenic rearrangements: differences between chromosomal translocation mechanisms and simple double-strand break repair.
    Blood. 2006 Jan 15;107(2):777-80 PMID: 16195334
  8. Repair of DNA double strand breaks by non-homologous end joining.
    Biochimie. 2003 Nov;85(11):1161-73 PMID: 14726021
  9. Different types of V(D)J recombination and end-joining defects in DNA double-strand break repair mutant mammalian cells.
    Eur J Immunol. 2002 Mar;32(3):701-9 PMID: 11870614
  10. Ku80 is required for immunoglobulin isotype switching.
    EMBO J. 1998 Apr 15;17(8):2404-11 PMID: 9545251
  11. Rag mutations reveal robust alternative end joining.
    Nature. 2007 Sep 27;449(7161):483-6 PMID: 17898768
  12. Two different types of double-strand breaks in Saccharomyces cerevisiae are repaired by similar RAD52-independent, nonhomologous recombination events.
    Mol Cell Biol. 1994 Feb;14(2):1293-301 PMID: 8289808
  13. The membrane form of the DNA repair protein Ku interacts at the cell surface with metalloproteinase 9.
    EMBO J. 2004 Oct 1;23(19):3758-68 PMID: 15385961
  14. A means to a DNA end: the many roles of Ku.
    Nat Rev Mol Cell Biol. 2004 May;5(5):367-78 PMID: 15122350
  15. Late embryonic lethality and impaired V(D)J recombination in mice lacking DNA ligase IV.
    Nature. 1998 Nov 12;396(6707):173-7 PMID: 9823897
  16. Involvement of polynucleotide kinase in a poly(ADP-ribose) polymerase-1-dependent DNA double-strand breaks rejoining pathway.
    J Mol Biol. 2006 Feb 17;356(2):257-65 PMID: 16364363
  17. Formation of NHEJ-derived reciprocal chromosomal translocations does not require Ku70.
    Nat Cell Biol. 2007 Aug;9(8):978-81 PMID: 17643113
  18. Chromosome translocation based on illegitimate recombination in human tumors.
    Proc Natl Acad Sci U S A. 1998 Sep 29;95(20):11786-91 PMID: 9751743
  19. Involvement of DNA polymerase mu in the repair of a specific subset of DNA double-strand breaks in mammalian cells.
    Nucleic Acids Res. 2007;35(11):3551-60 PMID: 17483519
  20. Role for DNA repair factor XRCC4 in immunoglobulin class switch recombination.
    J Exp Med. 2007 Jul 9;204(7):1717-27 PMID: 17606631
  21. Cernunnos-XLF, a recently identified non-homologous end-joining factor required for the development of the immune system.
    Curr Opin Allergy Clin Immunol. 2006 Dec;6(6):416-20 PMID: 17088645
  22. Saccharomyces Ku70, mre11/rad50 and RPA proteins regulate adaptation to G2/M arrest after DNA damage.
    Cell. 1998 Aug 7;94(3):399-409 PMID: 9708741
  23. Positional stability of single double-strand breaks in mammalian cells.
    Nat Cell Biol. 2007 Jun;9(6):675-82 PMID: 17486118
  24. The DNA polymerase lambda is required for the repair of non-compatible DNA double strand breaks by NHEJ in mammalian cells.
    Nucleic Acids Res. 2006 May 31;34(10):2998-3007 PMID: 16738138
  25. A Ku80 fragment with dominant negative activity imparts a radiosensitive phenotype to CHO-K1 cells.
    Nucleic Acids Res. 2000 Dec 1;28(23):4778-82 PMID: 11095690
  26. DNA double-strand break repair in cell-free extracts from Ku80-deficient cells: implications for Ku serving as an alignment factor in non-homologous DNA end joining.
    Nucleic Acids Res. 2000 Jul 1;28(13):2585-96 PMID: 10871410
  27. Impact of the KU80 pathway on NHEJ-induced genome rearrangements in mammalian cells.
    Mol Cell. 2004 Jun 4;14(5):611-23 PMID: 15175156
  28. DNA ligase III as a candidate component of backup pathways of nonhomologous end joining.
    Cancer Res. 2005 May 15;65(10):4020-30 PMID: 15899791
  29. Double-strand break repair in Ku86- and XRCC4-deficient cells.
    Nucleic Acids Res. 1998 Dec 1;26(23):5333-42 PMID: 9826756
  30. Ku DNA end-binding protein modulates homologous repair of double-strand breaks in mammalian cells.
    Genes Dev. 2001 Dec 15;15(24):3237-42 PMID: 11751629
  31. IgH class switching and translocations use a robust non-classical end-joining pathway.
    Nature. 2007 Sep 27;449(7161):478-82 PMID: 17713479
  32. A biochemically defined system for mammalian nonhomologous DNA end joining.
    Mol Cell. 2004 Dec 3;16(5):701-13 PMID: 15574326
  33. An xrcc4 defect or Wortmannin stimulates homologous recombination specifically induced by double-strand breaks in mammalian cells.
    Nucleic Acids Res. 2002 Aug 1;30(15):3454-63 PMID: 12140331
  34. DNA strand break rejoining defect in xrs-6 is complemented by transfection with the human Ku80 gene.
    Cancer Res. 1995 Mar 15;55(6):1235-8 PMID: 7882315
  35. Unrepaired DNA breaks in p53-deficient cells lead to oncogenic gene amplification subsequent to translocations.
    Cell. 2002 Jun 28;109(7):811-21 PMID: 12110179
  36. Transient stability of DNA ends allows nonhomologous end joining to precede homologous recombination.
    Mol Cell. 2002 Nov;10(5):1189-99 PMID: 12453425
  37. PARP-1 and Ku compete for repair of DNA double strand breaks by distinct NHEJ pathways.
    Nucleic Acids Res. 2006;34(21):6170-82 PMID: 17088286
  38. Homology-directed repair is a major double-strand break repair pathway in mammalian cells.
    Proc Natl Acad Sci U S A. 1998 Apr 28;95(9):5172-7 PMID: 9560248
  39. Impact of DNA ligase IV on the fidelity of end joining in human cells.
    Nucleic Acids Res. 2003 Apr 15;31(8):2157-67 PMID: 12682366
  40. The embryonic lethality in DNA ligase IV-deficient mice is rescued by deletion of Ku: implications for unifying the heterogeneous phenotypes of NHEJ mutants.
    DNA Repair (Amst). 2002 Dec 5;1(12):1017-26 PMID: 12531011
  41. Ku70 is required for late B cell development and immunoglobulin heavy chain class switching.
    J Exp Med. 1998 Jun 15;187(12):2081-9 PMID: 9625768
  42. The nonhomologous end-joining pathway of DNA repair is required for genomic stability and the suppression of translocations.
    Proc Natl Acad Sci U S A. 2000 Jun 6;97(12):6630-3 PMID: 10823907
  43. Evidence for replicative repair of DNA double-strand breaks leading to oncogenic translocation and gene amplification.
    J Exp Med. 2002 Aug 19;196(4):469-80 PMID: 12186839
  44. Distinct mechanisms of nonhomologous end joining in the repair of site-directed chromosomal breaks with noncomplementary and complementary ends.
    Radiat Res. 2006 Oct;166(4):567-74 PMID: 17007549
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
1091-6490
Published
2007-12-26
Epub
2007-00-18
Pages
20902-7
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC2409239
Subset
IM
Corrections
CommentIn
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