Abstract
The plastid ribisomal RNA (rRNA) operon of the achlorophyllous root parasite Conopholis americana was completely sequenced. Full-length rRNA genes are retained in the gene cluster, but significant divergence has occurred in the 16S, 23S and 5S genes. Both the 16S-23S intergenic spacer and the 4.5S-5S intergenic spacer have suffered substantial deletions, including the two tRNA genes typically found in prokaryotic and plastid 16S-23S spacers.
MeSH Terms
Base Composition
Base Sequence
Biological Evolution
Chloroplasts
Molecular Sequence Data
Multigene Family/genetics
Mutation/genetics
Nucleic Acid Conformation
Operon/genetics
Phylogeny
Plants/genetics
RNA, Ribosomal/genetics
RNA, Transfer, Ala/genetics
RNA, Transfer, Ile/genetics
Sequence Alignment
Chemicals
RNA, Ribosomal
RNA, Transfer, Ala
RNA, Transfer, Ile
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Wimpee C F
Department of Biological Sciences, University of Wisconsin-Milwaukee 53201.
Morgan R
Wrobel R
References (20)
20 references, click to expand
-
Structure and transcription of the 5S rRNA gene from spinach chloroplasts.
Curr Genet. 1987;12(4):263-9
PMID: 2835181
-
The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals.
Mol Gen Genet. 1989 Jun;217(2-3):185-94
PMID: 2770692
-
A divergent plastid genome in Conopholis americana, an achlorophyllous parasitic plant.
Plant Mol Biol. 1991 Jul;17(1):161-6
PMID: 1651128
-
Sequencing of the 16S-23S spacer in a ribosomal RNA operon of Zea mays chloroplast DNA reveals two split tRNA genes.
Cell. 1981 Jul;25(1):203-13
PMID: 7023695
-
Processing of procaryotic ribonucleic acid.
Microbiol Rev. 1981 Dec;45(4):502-41
PMID: 6173734
-
Cotranscription and processing of 23S, 4.5S and 5S rRNA in chloroplasts from Zea mays.
Nucleic Acids Res. 1984 Oct 25;12(20):7633-47
PMID: 6093045
-
The complete nucleotide sequence of a 23-S rRNA gene from tobacco chloroplasts.
Eur J Biochem. 1982 May;124(1):13-9
PMID: 6177532
-
Evolutionary diversity of eukaryotic small-subunit rRNA genes.
Proc Natl Acad Sci U S A. 1986 Mar;83(5):1383-7
PMID: 2419907
-
Loss of photosynthetic and chlororespiratory genes from the plastid genome of a parasitic flowering plant.
Nature. 1990 Nov 22;348(6299):337-9
PMID: 2250706
-
DNA sequencing with chain-terminating inhibitors.
Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7
PMID: 271968
-
The rRNA operon from Zea mays chloroplasts: nucleotide sequence of 23S rDNA and its homology with E.coli 23S rDNA.
Nucleic Acids Res. 1981 Jun 25;9(12):2853-69
PMID: 7024906
-
The soybean chloroplast genome: nucleotide sequence of a region containing tRNA-Val (GAC) and 16S rRNA gene.
Nucleic Acids Res. 1988 Feb 11;16(3):1200
PMID: 3344207
-
The gain of two chloroplast tRNA introns marks the green algal ancestors of land plants.
Nature. 1990 May 17;345(6272):268-70
PMID: 2333097
-
A general secondary-structure model for procaryotic and eucaryotic RNAs from the small ribosomal subunits.
Eur J Biochem. 1981 Dec;120(3):487-95
PMID: 6174326
-
The complete nucleotide sequence of 16S ribosomal RNA gene from tobacco chloroplasts.
Gene. 1982 Feb;17(2):213-8
PMID: 7044901
-
Primary and secondary structures of Escherichia coli MRE 600 23S ribosomal RNA. Comparison with models of secondary structure for maize chloroplast 23S rRNA and for large portions of mouse and human 16S mitochondrial rRNAs.
Nucleic Acids Res. 1981 Sep 11;9(17):4303-24
PMID: 6170936
-
Sequence organization of the chloroplast ribosomal spacer ofSpinacia oleracea including the 3' end of the 16S rRNA and the 5' end of the 23S rRNA.
Plant Mol Biol. 1987 Jan;10(1):53-63
PMID: 24277463
-
Nucleotide sequence of the spinach chloroplast 4.5S ribosomal RNA gene and of its 5' flanking region including the 3' end of the 23S rRNA gene.
Nucleic Acids Res. 1986 Dec 9;14(23):9533
PMID: 3797251
-
A gene coding for tRNA is located near 5' terminus of 16S rRNA gene in Zea mays chloroplast genome.
Proc Natl Acad Sci U S A. 1981 Aug;78(8):4748-52
PMID: 16593071
-
Nucleotide sequence of the 16S - 23S spacer region in an rRNA gene cluster from tobacco chloroplast DNA.
Nucleic Acids Res. 1982 Apr 24;10(8):2665-76
PMID: 6281739