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PMID: 1712067 Published · ppublish English Journal Article

The cps gene cluster of Salmonella strain LT2 includes a second mannose pathway: sequence of two genes and relationship to genes in the rfb gene cluster.

Molecular & general genetics : MGG ·Vol. 227 ·No. 2 ·1991-06-00 ·Pages 173-80

Stevenson G, Lee SJ, Romana LK, Reeves PR

Abstract

We report the presence in Salmonella enterica strain LT2 (serovar thyphimurium) of duplicate genes for two steps in the synthesis of GDP-mannose. The previously known genes, rfbK (phosphomannomutase) and rfbM (mannose-1-phosphate guanyltransferase), are part of the gene cluster for the O antigen. The two new genes, cpsB and cpsG, respectively, are thought to be part of the gene cluster for the M antigen capsular polysaccharide, present in many Enterobacteriaceae. The two genes have been sequenced and have a GC content of 0.61, suggesting an origin outside of Salmonella. Comparison of the inferred protein sequences for cpsB and rfbM shows 57% identity of amino acids whereas for cpsG and rfbK there is only 19% identity. It is suggested that the greater divergence between cpsG and rfbK may be due to a period of accelerated evolution, perhaps precipitated by transfer of the genes from another species.

Related Genes
MeSH Terms
Amino Acid Sequence Base Composition Base Sequence Cloning, Molecular Gene Frequency Guanosine Diphosphate Mannose/metabolism Isoenzymes/genetics Isomerases/genetics Molecular Sequence Data Multigene Family Nucleotidyltransferases/genetics Phosphotransferases (Phosphomutases) Polysaccharides, Bacterial Salmonella/enzymology,genetics,immunology Sequence Homology, Nucleic Acid
Chemicals
Isoenzymes Polysaccharides, Bacterial Guanosine Diphosphate Mannose Nucleotidyltransferases mannose-1-phosphate guanylyltransferase (GDP) Isomerases Phosphotransferases (Phosphomutases) phosphomannomutase
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Stevenson G
Department of Microbiology, University of Sydney, N.S.W., Australia.
Lee S J
Romana L K
Reeves P R
References (20)
20 references, click to expand
  1. Linkage map of Salmonella typhimurium, Edition VI.
    Microbiol Rev. 1983 Sep;47(3):410-53 PMID: 6314110
  2. The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications.
    Nucleic Acids Res. 1987 Feb 11;15(3):1281-95 PMID: 3547335
  3. Rapid and efficient cosmid cloning.
    Nucleic Acids Res. 1981 Jul 10;9(13):2989-98 PMID: 6269067
  4. Extended deletions in the histidine-rough-B region of the Salmonella chromosome.
    Proc Natl Acad Sci U S A. 1967 Jun;57(6):1825-32 PMID: 5231414
  5. lon transcriptional regulation of genes necessary for capsular polysaccharide synthesis in Escherichia coli K-12.
    J Bacteriol. 1984 Oct;160(1):184-91 PMID: 6090411
  6. Genetic determination of enzymes synthesizing O-specific sugars of Salmonella lipopolysaccharides.
    J Bacteriol. 1966 Mar;91(3):1126-35 PMID: 5326096
  7. The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.
    Gene. 1982 Oct;19(3):259-68 PMID: 6295879
  8. Directional mutation pressure and neutral molecular evolution.
    Proc Natl Acad Sci U S A. 1988 Apr;85(8):2653-7 PMID: 3357886
  9. A system to study promoter and terminator signals recognized by Escherichia coli RNA polymerase.
    Gene Amplif Anal. 1981;2:383-415 PMID: 6101056
  10. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  11. MBIS--an integrated system for the retrieval and analyses of sequence data from nucleic acids and proteins.
    Nucleic Acids Res. 1986 Jan 10;14(1):265-72 PMID: 3753768
  12. Chromosomal location and evolutionary rate variation in enterobacterial genes.
    Science. 1989 Nov 10;246(4931):808-10 PMID: 2683084
  13. Chloramphenicol resistance cloning vector based on pUC9.
    Plasmid. 1987 Jan;17(1):54-7 PMID: 3107003
  14. The physical map of the whole E. coli chromosome: application of a new strategy for rapid analysis and sorting of a large genomic library.
    Cell. 1987 Jul 31;50(3):495-508 PMID: 3038334
  15. A comprehensive set of sequence analysis programs for the VAX.
    Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):387-95 PMID: 6546423
  16. The rate of synonymous substitution in enterobacterial genes is inversely related to codon usage bias.
    Mol Biol Evol. 1987 May;4(3):222-30 PMID: 3328816
  17. Genetic and biochemical studies on mannose-negative mutants that are deficient in phosphomannose isomerase in Escherichia coli K-12.
    J Bacteriol. 1967 Nov;94(5):1492-6 PMID: 4862193
  18. Evolution in bacteria: evidence for a universal substitution rate in cellular genomes.
    J Mol Evol. 1987;26(1-2):74-86 PMID: 3125340
  19. Altered deoxyribonucleotide pools in P2 eductants of Escherichia coli K-12 due to deletion of the dcd gene.
    J Bacteriol. 1976 May;126(2):999-1001 PMID: 177407
  20. Structure and sequence of the rfb (O antigen) gene cluster of Salmonella serovar typhimurium (strain LT2).
    Mol Microbiol. 1991 Mar;5(3):695-713 PMID: 1710759
Article Info
Journal
Molecular & general genetics : MGG
Abbr.
Mol Gen Genet
ISSN
0026-8925
Published
1991-06-00
Pages
173-80
Language
English
Region
Germany
NLM ID
0125036
Subset
IM
Databases
GENBANK
X54103, X59886, X63980, X63981, X63982, X63983, X63984, X63985, X63986, X63987
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