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PMID: 17024177 Published · ppublish English Journal Article Research Support, N.I.H., Intramural

The phosphorylation status of PAS-B distinguishes HIF-1alpha from HIF-2alpha in NBS1 repression.

The EMBO journal ·Vol. 25 ·No. 20 ·2006-10-18 ·Pages 4784-94

To KK, Sedelnikova OA, Samons M, Bonner WM, Huang LE

Abstract

Hypoxia promotes genetic instability for tumor progression. Recent evidence indicates that the transcription factor HIF-1alpha impairs DNA mismatch repair, yet the role of HIF-1alpha isoform, HIF-2alpha, in tumor progression remains obscure. In pursuit of the involvement of HIF-alpha in chromosomal instability, we report here that HIF-1alpha, specifically its PAS-B, induces DNA double-strand breaks at least in part by repressing the expression of NBS1, a crucial DNA repair gene constituting the MRE11A-RAD50-NBS1 complex. Despite strong similarities between the two isoforms, HIF-2alpha fails to do so. We demonstrate that this functional distinction stems from phosphorylation of HIF-2alpha Thr-324 by protein kinase D1, which discriminates between subtle differences of the two PAS-B in amino-acid sequence, thereby precluding NBS1 repression. Hence, our findings delineate a molecular pathway that functionally distinguishes HIF-1alpha from HIF-2alpha, and arguing a unique role for HIF-1alpha in tumor progression by promoting genomic instability.

MeSH Terms
Animals Basic Helix-Loop-Helix Transcription Factors/genetics,metabolism Cell Cycle Proteins/genetics,metabolism Cell Line Chromosomal Instability/genetics DNA Repair/genetics Down-Regulation/genetics Gene Expression Regulation, Neoplastic/genetics Humans Hypoxia-Inducible Factor 1, alpha Subunit/genetics,metabolism Multiprotein Complexes/genetics,metabolism Neoplasm Proteins/genetics,metabolism Neoplasms/genetics,metabolism Nuclear Proteins/genetics,metabolism Phosphorylation Protein Processing, Post-Translational Protein Structure, Tertiary/genetics Rabbits
Chemicals
Basic Helix-Loop-Helix Transcription Factors Cell Cycle Proteins HIF1A protein, human Hypoxia-Inducible Factor 1, alpha Subunit Multiprotein Complexes NBN protein, human Neoplasm Proteins Nuclear Proteins endothelial PAS domain-containing protein 1
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
To Kenneth K-W
Laboratory of Human Carcinogenesis, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Sedelnikova Olga A
Samons Melissa
Bonner William M
Huang L Eric
References (63)
63 references, click to expand
  1. Hypoxia-inducible factor 1alpha is essential for cell cycle arrest during hypoxia.
    Mol Cell Biol. 2003 Jan;23(1):359-69 PMID: 12482987
  2. Hypoxia links ATR and p53 through replication arrest.
    Mol Cell Biol. 2002 Mar;22(6):1834-43 PMID: 11865061
  3. ATR/ATM targets are phosphorylated by ATR in response to hypoxia and ATM in response to reoxygenation.
    J Biol Chem. 2003 Apr 4;278(14):12207-13 PMID: 12519769
  4. Decreased expression of the DNA mismatch repair gene Mlh1 under hypoxic stress in mammalian cells.
    Mol Cell Biol. 2003 May;23(9):3265-73 PMID: 12697826
  5. Tyrosine phosphorylation of protein kinase D in the pleckstrin homology domain leads to activation.
    J Biol Chem. 2003 May 16;278(20):17969-76 PMID: 12637538
  6. c-Myc directly regulates the transcription of the NBS1 gene involved in DNA double-strand break repair.
    J Biol Chem. 2003 May 23;278(21):19286-91 PMID: 12637527
  7. Hypoxia-inducible factor and its biomedical relevance.
    J Biol Chem. 2003 May 30;278(22):19575-8 PMID: 12639949
  8. Regulation of angiogenesis by hypoxia: role of the HIF system.
    Nat Med. 2003 Jun;9(6):677-84 PMID: 12778166
  9. Protein kinase D: a family affair.
    FEBS Lett. 2003 Jul 3;546(1):81-6 PMID: 12829240
  10. Targeting HIF-1 for cancer therapy.
    Nat Rev Cancer. 2003 Oct;3(10):721-32 PMID: 13130303
  11. HIF-1 as a target for drug development.
    Nat Rev Drug Discov. 2003 Oct;2(10):803-11 PMID: 14526383
  12. Differential roles of hypoxia-inducible factor 1alpha (HIF-1alpha) and HIF-2alpha in hypoxic gene regulation.
    Mol Cell Biol. 2003 Dec;23(24):9361-74 PMID: 14645546
  13. Multiple organ pathology, metabolic abnormalities and impaired homeostasis of reactive oxygen species in Epas1-/- mice.
    Nat Genet. 2003 Dec;35(4):331-40 PMID: 14608355
  14. Structural basis for PAS domain heterodimerization in the basic helix--loop--helix-PAS transcription factor hypoxia-inducible factor.
    Proc Natl Acad Sci U S A. 2003 Dec 23;100(26):15504-9 PMID: 14668441
  15. HIF-1 and hypoxic response: the plot thickens.
    Curr Opin Genet Dev. 2004 Feb;14(1):81-5 PMID: 15108809
  16. HIF-1alpha induces cell cycle arrest by functionally counteracting Myc.
    EMBO J. 2004 May 5;23(9):1949-56 PMID: 15071503
  17. Cancer genes and the pathways they control.
    Nat Med. 2004 Aug;10(8):789-99 PMID: 15286780
  18. Hypoxia and defective apoptosis drive genomic instability and tumorigenesis.
    Genes Dev. 2004 Sep 1;18(17):2095-107 PMID: 15314031
  19. Down-regulation of Rad51 and decreased homologous recombination in hypoxic cancer cells.
    Mol Cell Biol. 2004 Oct;24(19):8504-18 PMID: 15367671
  20. Inhibition of ATR leads to increased sensitivity to hypoxia/reoxygenation.
    Cancer Res. 2004 Sep 15;64(18):6556-62 PMID: 15374968
  21. Targeting HIF-alpha: when a magic arrow hits the bull's eye.
    Drug Discov Today. 2004 Oct 15;9(20):869 PMID: 15493075
  22. The Mre11 complex: at the crossroads of dna repair and checkpoint signalling.
    Nat Rev Mol Cell Biol. 2002 May;3(5):317-27 PMID: 11988766
  23. Inhibition of HIF is necessary for tumor suppression by the von Hippel-Lindau protein.
    Cancer Cell. 2002 Apr;1(3):237-46 PMID: 12086860
  24. The contribution of VHL substrate binding and HIF1-alpha to the phenotype of VHL loss in renal cell carcinoma.
    Cancer Cell. 2002 Apr;1(3):247-55 PMID: 12086861
  25. Loss of HIF-2alpha and inhibition of VEGF impair fetal lung maturation, whereas treatment with VEGF prevents fatal respiratory distress in premature mice.
    Nat Med. 2002 Jul;8(7):702-10 PMID: 12053176
  26. Adenovirus oncoproteins inactivate the Mre11-Rad50-NBS1 DNA repair complex.
    Nature. 2002 Jul 18;418(6895):348-52 PMID: 12124628
  27. Cellular adaptation to hypoxia: O2-sensing protein hydroxylases, hypoxia-inducible transcription factors, and O2-regulated gene expression.
    FASEB J. 2002 Aug;16(10):1151-62 PMID: 12153983
  28. Leu-574 of HIF-1alpha is essential for the von Hippel-Lindau (VHL)-mediated degradation pathway.
    J Biol Chem. 2002 Nov 1;277(44):41750-5 PMID: 12205091
  29. NBS1 localizes to gamma-H2AX foci through interaction with the FHA/BRCT domain.
    Curr Biol. 2002 Oct 29;12(21):1846-51 PMID: 12419185
  30. Nbs1 is essential for DNA repair by homologous recombination in higher vertebrate cells.
    Nature. 2002 Nov 7;420(6911):93-8 PMID: 12422221
  31. DNA double-stranded breaks induce histone H2AX phosphorylation on serine 139.
    J Biol Chem. 1998 Mar 6;273(10):5858-68 PMID: 9488723
  32. Nibrin, a novel DNA double-strand break repair protein, is mutated in Nijmegen breakage syndrome.
    Cell. 1998 May 1;93(3):467-76 PMID: 9590180
  33. The hMre11/hRad50 protein complex and Nijmegen breakage syndrome: linkage of double-strand break repair to the cellular DNA damage response.
    Cell. 1998 May 1;93(3):477-86 PMID: 9590181
  34. Positional cloning of the gene for Nijmegen breakage syndrome.
    Nat Genet. 1998 Jun;19(2):179-81 PMID: 9620777
  35. Regulation of hypoxia-inducible factor 1alpha is mediated by an O2-dependent degradation domain via the ubiquitin-proteasome pathway.
    Proc Natl Acad Sci U S A. 1998 Jul 7;95(14):7987-92 PMID: 9653127
  36. Role of HIF-1alpha in hypoxia-mediated apoptosis, cell proliferation and tumour angiogenesis.
    Nature. 1998 Jul 30;394(6692):485-90 PMID: 9697772
  37. A new role for hypoxia in tumor progression: induction of fragile site triggering genomic rearrangements and formation of complex DMs and HSRs.
    Mol Cell. 1998 Aug;2(2):259-65 PMID: 9734364
  38. Induction of endothelial PAS domain protein-1 by hypoxia: characterization and comparison with hypoxia-inducible factor-1alpha.
    Blood. 1998 Oct 1;92(7):2260-8 PMID: 9746763
  39. The hypoxia-responsive transcription factor EPAS1 is essential for catecholamine homeostasis and protection against heart failure during embryonic development.
    Genes Dev. 1998 Nov 1;12(21):3320-4 PMID: 9808618
  40. Genetic instabilities in human cancers.
    Nature. 1998 Dec 17;396(6712):643-9 PMID: 9872311
  41. Megabase chromatin domains involved in DNA double-strand breaks in vivo.
    J Cell Biol. 1999 Sep 6;146(5):905-16 PMID: 10477747
  42. Genetic instability and the tumor microenvironment: towards the concept of microenvironment-induced mutagenesis.
    Mutat Res. 2005 Jan 6;569(1-2):75-85 PMID: 15603753
  43. Targeted replacement of hypoxia-inducible factor-1alpha by a hypoxia-inducible factor-2alpha knock-in allele promotes tumor growth.
    Cancer Res. 2005 Mar 15;65(6):2277-86 PMID: 15781641
  44. HIF-1alpha induces genetic instability by transcriptionally downregulating MutSalpha expression.
    Mol Cell. 2005 Mar 18;17(6):793-803 PMID: 15780936
  45. An essential function for NBS1 in the prevention of ataxia and cerebellar defects.
    Nat Med. 2005 May;11(5):538-44 PMID: 15821748
  46. Decreased growth of Vhl-/- fibrosarcomas is associated with elevated levels of cyclin kinase inhibitors p21 and p27.
    Mol Cell Biol. 2005 Jun;25(11):4565-78 PMID: 15899860
  47. Proline hydroxylation and gene expression.
    Annu Rev Biochem. 2005;74:115-28 PMID: 15952883
  48. Contrasting properties of hypoxia-inducible factor 1 (HIF-1) and HIF-2 in von Hippel-Lindau-associated renal cell carcinoma.
    Mol Cell Biol. 2005 Jul;25(13):5675-86 PMID: 15964822
  49. Genetic evidence for a tumor suppressor role of HIF-2alpha.
    Cancer Cell. 2005 Aug;8(2):131-41 PMID: 16098466
  50. Genetic instability: the dark side of the hypoxic response.
    Cell Cycle. 2005 Jul;4(7):881-2 PMID: 15970707
  51. Hypoxia-induced down-regulation of BRCA1 expression by E2Fs.
    Cancer Res. 2005 Dec 15;65(24):11597-604 PMID: 16357170
  52. HIF-2alpha regulates Oct-4: effects of hypoxia on stem cell function, embryonic development, and tumor growth.
    Genes Dev. 2006 Mar 1;20(5):557-70 PMID: 16510872
  53. HIF-1-mediated expression of pyruvate dehydrogenase kinase: a metabolic switch required for cellular adaptation to hypoxia.
    Cell Metab. 2006 Mar;3(3):177-85 PMID: 16517405
  54. HIF-1 mediates adaptation to hypoxia by actively downregulating mitochondrial oxygen consumption.
    Cell Metab. 2006 Mar;3(3):187-97 PMID: 16517406
  55. Initiation of DNA fragmentation during apoptosis induces phosphorylation of H2AX histone at serine 139.
    J Biol Chem. 2000 Mar 31;275(13):9390-5 PMID: 10734083
  56. The expression and distribution of the hypoxia-inducible factors HIF-1alpha and HIF-2alpha in normal human tissues, cancers, and tumor-associated macrophages.
    Am J Pathol. 2000 Aug;157(2):411-21 PMID: 10934146
  57. A critical role for histone H2AX in recruitment of repair factors to nuclear foci after DNA damage.
    Curr Biol. 2000 Jul 27-Aug 10;10(15):886-95 PMID: 10959836
  58. The DNA damage response: putting checkpoints in perspective.
    Nature. 2000 Nov 23;408(6811):433-9 PMID: 11100718
  59. p53 binding protein 1 (53BP1) is an early participant in the cellular response to DNA double-strand breaks.
    J Cell Biol. 2000 Dec 25;151(7):1381-90 PMID: 11134068
  60. Relationship of hypoxia-inducible factor (HIF)-1alpha and HIF-2alpha expression to vascular endothelial growth factor induction and hypoxia survival in human breast cancer cell lines.
    Cancer Res. 2000 Dec 15;60(24):7106-13 PMID: 11156418
  61. A motif-based profile scanning approach for genome-wide prediction of signaling pathways.
    Nat Biotechnol. 2001 Apr;19(4):348-53 PMID: 11283593
  62. Molecular mechanism of hypoxia-inducible factor 1alpha -p300 interaction. A leucine-rich interface regulated by a single cysteine.
    J Biol Chem. 2001 Feb 2;276(5):3550-4 PMID: 11063749
  63. DNA damage and repair.
    Nature. 2003 Jan 23;421(6921):436-40 PMID: 12540918
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
2006-10-18
Epub
2006-00-05
Pages
4784-94
Language
English
Region
England
NLM ID
8208664
PMCID
PMC1618093
Subset
IM
Grants
Intramural NIH HHS · United States
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