Home LiteratureArticle Details
PMID: 17018296 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Cdc7-Dbf4 phosphorylates MCM proteins via a docking site-mediated mechanism to promote S phase progression.

Molecular cell ·Vol. 24 ·No. 1 ·2006-10-06 ·Pages 101-13

Sheu YJ, Stillman B

Abstract

Origins of DNA replication are licensed in G1 by recruiting the minichromosome maintenance (MCM) proteins to form a prereplicative complex (pre-RC). Prior to initiation of DNA synthesis from each origin, a preinitiation complex (pre-IC) containing Cdc45 and other proteins is formed. We report that Cdc7-Dbf4 protein kinase (DDK) promotes assembly of a stable Cdc45-MCM complex exclusively on chromatin in S phase. In this complex, Mcm4 is hyperphosphorylated. Studies in vitro using purified DDK and Mcm4 demonstrate that hyperphosphorylation occurs at the Mcm4 N terminus. However, the DDK substrate specificity is conferred by an adjacent DDK-docking domain (DDD), sufficient for facilitating efficient phosphorylation of artificial phosphoacceptors in cis. Genetic evidence suggests that phosphorylation of Mcm4 by DDK is important for timely S phase progression and for cell viability upon overproduction of Cdc45. We suggest that DDK docks on and phosphorylates MCM proteins at licensed origins to promote proper assembly of pre-IC.

MeSH Terms
Amino Acid Motifs Apoenzymes/metabolism Binding Sites Cell Cycle Proteins/chemistry,metabolism,physiology Chromatin/metabolism Conserved Sequence DNA Replication DNA-Binding Proteins/chemistry,metabolism,physiology Minichromosome Maintenance Complex Component 4 Models, Biological Molecular Sequence Data Nuclear Proteins/chemistry,metabolism,physiology Phosphorylation Protein Serine-Threonine Kinases/chemistry,metabolism,physiology Protein Structure, Tertiary S Phase/physiology Saccharomyces cerevisiae/cytology,genetics,metabolism Saccharomyces cerevisiae Proteins/chemistry,metabolism,physiology Sequence Alignment
Chemicals
Apoenzymes CDC45 protein, S cerevisiae Cell Cycle Proteins Chromatin DNA-Binding Proteins Dbf4 protein, S cerevisiae Nuclear Proteins Saccharomyces cerevisiae Proteins CDC7 protein, S cerevisiae Protein Serine-Threonine Kinases MCM4 protein, S cerevisiae Minichromosome Maintenance Complex Component 4
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Sheu Yi-Jun
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Stillman Bruce
References (46)
46 references, click to expand
  1. Cdc7 is required throughout the yeast S phase to activate replication origins.
    Genes Dev. 1998 Feb 15;12(4):491-501 PMID: 9472018
  2. Identification of a substrate-targeting domain in cyclin E necessary for phosphorylation of the retinoblastoma protein.
    Proc Natl Acad Sci U S A. 1998 Mar 3;95(5):2535-40 PMID: 9482921
  3. Formation of a preinitiation complex by S-phase cyclin CDK-dependent loading of Cdc45p onto chromatin.
    Science. 1998 Apr 24;280(5363):593-6 PMID: 9554851
  4. Substrate recruitment to cyclin-dependent kinase 2 by a multipurpose docking site on cyclin A.
    Proc Natl Acad Sci U S A. 1998 Sep 1;95(18):10453-8 PMID: 9724724
  5. CLB5-dependent activation of late replication origins in S. cerevisiae.
    Mol Cell. 1998 Aug;2(2):173-82 PMID: 9734354
  6. Differential assembly of Cdc45p and DNA polymerases at early and late origins of DNA replication.
    Proc Natl Acad Sci U S A. 1999 Aug 3;96(16):9130-5 PMID: 10430907
  7. A role for the Cdc7 kinase regulatory subunit Dbf4p in the formation of initiation-competent origins of replication.
    Genes Dev. 1999 Aug 15;13(16):2159-76 PMID: 10465792
  8. Cdc7p-Dbf4p kinase binds to chromatin during S phase and is regulated by both the APC and the RAD53 checkpoint pathway.
    EMBO J. 1999 Oct 1;18(19):5334-46 PMID: 10508166
  9. Structure and function of Polo-like kinases.
    Oncogene. 2005 Jan 10;24(2):248-59 PMID: 15640840
  10. Origin recognition and the chromosome cycle.
    FEBS Lett. 2005 Feb 7;579(4):877-84 PMID: 15680967
  11. GINS maintains association of Cdc45 with MCM in replisome progression complexes at eukaryotic DNA replication forks.
    Nat Cell Biol. 2006 Apr;8(4):358-66 PMID: 16531994
  12. Distinct roles for Sld3 and GINS during establishment and progression of eukaryotic DNA replication forks.
    EMBO J. 2006 Apr 19;25(8):1753-63 PMID: 16601689
  13. Assembly of a complex containing Cdc45p, replication protein A, and Mcm2p at replication origins controlled by S-phase cyclin-dependent kinases and Cdc7p-Dbf4p kinase.
    Mol Cell Biol. 2000 May;20(9):3086-96 PMID: 10757793
  14. DNA synthesis at individual replication forks requires the essential initiation factor Cdc45p.
    EMBO J. 2000 May 2;19(9):2082-93 PMID: 10790374
  15. Hierarchy of S-phase-promoting factors: yeast Dbf4-Cdc7 kinase requires prior S-phase cyclin-dependent kinase activation.
    Mol Cell Biol. 2000 Jun;20(11):3795-806 PMID: 10805723
  16. Cdc7p-Dbf4p becomes famous in the cell cycle.
    J Cell Sci. 2000 Jun;113 ( Pt 12):2111-7 PMID: 10825284
  17. Uninterrupted MCM2-7 function required for DNA replication fork progression.
    Science. 2000 Jun 2;288(5471):1643-7 PMID: 10834843
  18. The hexameric eukaryotic MCM helicase: building symmetry from nonidentical parts.
    J Biol Chem. 2000 Nov 10;275(45):34833-6 PMID: 10980206
  19. Is the MCM2-7 complex the eukaryotic DNA replication fork helicase?
    Curr Opin Genet Dev. 2001 Feb;11(1):64-70 PMID: 11163153
  20. The Cdc7/Dbf4 protein kinase: target of the S phase checkpoint?
    EMBO Rep. 2000 Oct;1(4):319-22 PMID: 11269496
  21. Sld3, which interacts with Cdc45 (Sld4), functions for chromosomal DNA replication in Saccharomyces cerevisiae.
    EMBO J. 2001 Apr 17;20(8):2097-107 PMID: 11296242
  22. Cyclin-dependent kinases prevent DNA re-replication through multiple mechanisms.
    Nature. 2001 Jun 28;411(6841):1068-73 PMID: 11429609
  23. S-Cdk-dependent phosphorylation of Sld2 essential for chromosomal DNA replication in budding yeast.
    Nature. 2002 Feb 7;415(6872):651-5 PMID: 11807498
  24. Cdc7 kinase complex: a key regulator in the initiation of DNA replication.
    J Cell Physiol. 2002 Mar;190(3):287-96 PMID: 11857444
  25. The chromosome replication cycle.
    J Cell Sci. 2002 Mar 1;115(Pt 5):869-72 PMID: 11870205
  26. The mcm5-bob1 bypass of Cdc7p/Dbf4p in DNA replication depends on both Cdk1-independent and Cdk1-dependent steps in Saccharomyces cerevisiae.
    Genetics. 2002 May;161(1):47-57 PMID: 12019222
  27. DNA replication in eukaryotic cells.
    Annu Rev Biochem. 2002;71:333-74 PMID: 12045100
  28. Improved flow cytometric analysis of the budding yeast cell cycle.
    Cell Cycle. 2002 Mar-Apr;1(2):132-6 PMID: 12429922
  29. CDK- and Cdc45-dependent priming of the MCM complex on chromatin during S-phase in Xenopus egg extracts: possible activation of MCM helicase by association with Cdc45.
    Genes Cells. 2003 Feb;8(2):145-61 PMID: 12581157
  30. GINS, a novel multiprotein complex required for chromosomal DNA replication in budding yeast.
    Genes Dev. 2003 May 1;17(9):1153-65 PMID: 12730134
  31. Functional proteomic identification of DNA replication proteins by induced proteolysis in vivo.
    Nature. 2003 Jun 12;423(6941):720-4 PMID: 12768207
  32. Eukaryotic MCM proteins: beyond replication initiation.
    Microbiol Mol Biol Rev. 2004 Mar;68(1):109-31 PMID: 15007098
  33. A requirement for MCM7 and Cdc45 in chromosome unwinding during eukaryotic DNA replication.
    EMBO J. 2004 Sep 15;23(18):3667-76 PMID: 15329670
  34. Cold-sensitive cell-division-cycle mutants of yeast: isolation, properties, and pseudoreversion studies.
    Genetics. 1982 Apr;100(4):547-63 PMID: 6749598
  35. Interaction of Dbf4, the Cdc7 protein kinase regulatory subunit, with yeast replication origins in vivo.
    Science. 1994 Aug 26;265(5176):1243-6 PMID: 8066465
  36. Src homology 2 domain as a specificity determinant in the c-Abl-mediated tyrosine phosphorylation of the RNA polymerase II carboxyl-terminal repeated domain.
    Proc Natl Acad Sci U S A. 1995 Feb 28;92(5):1555-9 PMID: 7533294
  37. Cdc45p assembles into a complex with Cdc46p/Mcm5p, is required for minichromosome maintenance, and is essential for chromosomal DNA replication.
    Proc Natl Acad Sci U S A. 1996 Oct 29;93(22):12309-14 PMID: 8901577
  38. Identification of a cyclin-cdk2 recognition motif present in substrates and p21-like cyclin-dependent kinase inhibitors.
    Mol Cell Biol. 1996 Dec;16(12):6623-33 PMID: 8943316
  39. Viewpoint: putting the cell cycle in order.
    Science. 1996 Dec 6;274(5293):1643-5 PMID: 8984634
  40. mcm5/cdc46-bob1 bypasses the requirement for the S phase activator Cdc7p.
    Proc Natl Acad Sci U S A. 1997 Apr 1;94(7):3151-5 PMID: 9096361
  41. The activating dual phosphorylation of MAPK by MEK is nonprocessive.
    Biochemistry. 1997 May 20;36(20):5929-33 PMID: 9166761
  42. Characterization of Cdc47p-minichromosome maintenance complexes in Saccharomyces cerevisiae: identification of Cdc45p as a subunit.
    Mol Cell Biol. 1997 Oct;17(10):5867-75 PMID: 9315644
  43. Components and dynamics of DNA replication complexes in S. cerevisiae: redistribution of MCM proteins and Cdc45p during S phase.
    Cell. 1997 Oct 3;91(1):59-69 PMID: 9335335
  44. Mcm2 is a target of regulation by Cdc7-Dbf4 during the initiation of DNA synthesis.
    Genes Dev. 1997 Dec 15;11(24):3365-74 PMID: 9407029
  45. Persistent initiation of DNA replication and chromatin-bound MCM proteins during the cell cycle in cdc6 mutants.
    Genes Dev. 1997 Dec 15;11(24):3375-86 PMID: 9407030
  46. The Cdc7 protein kinase is required for origin firing during S phase.
    Genes Dev. 1998 Feb 15;12(4):480-90 PMID: 9472017
Article Info
Journal
Molecular cell
Abbr.
Mol Cell
ISSN
1097-2765
Published
2006-10-06
Pages
101-13
Language
English
Region
United States
NLM ID
9802571
PMCID
PMC2923825
Subset
IM
Grants
NIGMS NIH HHS · R01 GM045436 · United States
NIGMS NIH HHS · R01 GM045436-18 · United States
NIGMS NIH HHS · GM 45436 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com