Home LiteratureArticle Details
PMID: 16593101 Published · ppublish English Journal Article

Evolution of DNA sequence organization in mitochondrial genomes of Zea.

Sederoff RR, Levings CS, Timothy DH, Hu WW

Abstract

Molecular mechanisms underlying the evolution of mtDNA in maize and three species of teosinte have been investigated. By using DNA transfer techniques and cloned fragments of maize mtDNA, changes in the position of homologous sequences in restriction digests were analyzed in related taxa. The resulting patterns indicate general conservation of sequence homology in all four species. One-third of the cloned fragments showed sequences conserved in homology and position of BamHI restriction fragments. Other fragments produced patterns indicating that extensive rearrangement of DNA sequences has taken place. In two cases, hybridization patterns revealed major changes in relative abundance of specific sequences that we believe are related to the molecular heterogeneity phenomenon of maize mtDNA. The evolution of mtDNA in these plants appears dramatically different from that in animal mtDNA, where base substitutions may account for most of the observed changes in restriction patterns.

Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Sederoff R R
Department of Genetics, North Carolina State University, Raleigh, North Carolina 27650.
Levings C S
Timothy D H
Hu W W
References (29)
29 references, click to expand
  1. Mitochondrial DNA polymorphism: evidence that variants detected by restriction enzymes differ in nucleotide sequence rather than in methylation.
    Proc Natl Acad Sci U S A. 1980 Nov;77(11):6415-9 PMID: 6256736
  2. Polymorphism in mitochondrial DNA of humans as revealed by restriction endonuclease analysis.
    Proc Natl Acad Sci U S A. 1980 Jun;77(6):3605-9 PMID: 6251473
  3. A highly polymorphic locus in human DNA.
    Proc Natl Acad Sci U S A. 1980 Nov;77(11):6754-8 PMID: 6935681
  4. Heterogeneity of Maize Cytoplasmic Genomes among Male-Sterile Cytoplasms.
    Genetics. 1978 May;89(1):121-36 PMID: 17248823
  5. Physicochemical characterization of mitochondrial DNA from soybean.
    Plant Physiol. 1978 Mar;61(3):460-4 PMID: 16660314
  6. Organelle DNA variation and systematic relationships in the genus Zea: Teosinte.
    Proc Natl Acad Sci U S A. 1979 Sep;76(9):4220-4 PMID: 16592708
  7. Cytoplasmic Reversion of cms-S in Maize: Association with a Transpositional Event.
    Science. 1980 Aug 29;209(4460):1021-3 PMID: 17747231
  8. Restriction endonuclease analysis of mitochondrial DNA from normal and Texas cytoplasmic male-sterile maize.
    Science. 1976 Jul 9;193(4248):158-60 PMID: 17759255
  9. The mitochondrial genome of yeast.
    Cell. 1978 Nov;15(3):705-23 PMID: 153200
  10. Mitochondrial DNA from various organisms does not contain internally methylated cytosine in -CCGG- sequences.
    Biochim Biophys Acta. 1979 Sep 27;564(2):355-7 PMID: 158389
  11. Inter- and intraspecific variation in restriction maps of Drosophila mitochondrial DNAs.
    Nature. 1979 Oct 25;281(5733):696-9 PMID: 233134
  12. Efficient transfer of large DNA fragments from agarose gels to diazobenzyloxymethyl-paper and rapid hybridization by using dextran sulfate.
    Proc Natl Acad Sci U S A. 1979 Aug;76(8):3683-7 PMID: 291033
  13. Mathematical model for studying genetic variation in terms of restriction endonucleases.
    Proc Natl Acad Sci U S A. 1979 Oct;76(10):5269-73 PMID: 291943
  14. Mitochondrial DNA clones and matriarchal phylogeny within and among geographic populations of the pocket gopher, Geomys pinetis.
    Proc Natl Acad Sci U S A. 1979 Dec;76(12):6694-8 PMID: 293756
  15. Restriction endonuclease cleavage maps of rat and mouse mitochondrial DNAs.
    Nucleic Acids Res. 1977;4(5):1291-9 PMID: 331254
  16. Split genes and RNA splicing.
    Science. 1979 Apr 20;204(4390):264-71 PMID: 373120
  17. Mitochondrial DNA analyses and the origin and relative age of parthenogenetic lizards (genus Cnemidophorus).
    Science. 1979 Mar 23;203(4386):1247-9 PMID: 424751
  18. The use of restriction endonucleases to measure mitochondrial DNA sequence relatedness in natural populations. I. Population structure and evolution in the genus Peromyscus.
    Genetics. 1979 May;92(1):279-95 PMID: 499767
  19. Mapping of mitochondrial DNA of individual sheep and goats: rapid evolution in the D loop region.
    Cell. 1977 Jul;11(3):571-83 PMID: 884736
  20. Estimation of DNA sequence divergence from comparison of restriction endonuclease digests.
    Nucleic Acids Res. 1977;4(5):1257-65 PMID: 896461
  21. Characterization of families of repeated DNA sequences from four vascular plants.
    Biochemistry. 1977 Oct 18;16(21):4655-63 PMID: 911782
  22. Specific cleavage analysis of mammalian mitochondrial DNA.
    Proc Natl Acad Sci U S A. 1975 Nov;72(11):4496-500 PMID: 1060130
  23. So much "junk" DNA in our genome.
    Brookhaven Symp Biol. 1972;23:366-70 PMID: 5065367
  24. Gene regulation for higher cells: a theory.
    Science. 1969 Jul 25;165(3891):349-57 PMID: 5789433
  25. Molecular cloning and characterization of the human beta-like globin gene cluster.
    Cell. 1980 Apr;19(4):959-72 PMID: 6155216
  26. Can partial methylation explain the complex fragment patterns observed when plant mitochondrial DNA is cleaved with restriction endonucleases?
    FEBS Lett. 1980 Mar 10;111(2):340-6 PMID: 6244190
  27. Selfish genes, the phenotype paradigm and genome evolution.
    Nature. 1980 Apr 17;284(5757):601-3 PMID: 6245369
  28. Further analysis of the type differences of rat-liver mitochondrial DNA.
    Biochim Biophys Acta. 1980 Mar 28;607(1):1-9 PMID: 6245696
  29. Evolutionary tree for apes and humans based on cleavage maps of mitochondrial DNA.
    Proc Natl Acad Sci U S A. 1981 Apr;78(4):2432-6 PMID: 6264476
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1981-10-00
Pages
5953-7
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC348955
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com