Home LiteratureArticle Details
PMID: 16453503 Published · ppublish English Journal Article

UAG readthrough during TMV RNA translation: isolation and sequence of two tRNAs with suppressor activity from tobacco plants.

The EMBO journal ·Vol. 3 ·No. 2 ·1984-02-00 ·Pages 351-6

Beier H, Barciszewska M, Krupp G, Mitnacht R, Gross HJ

Abstract

The hypothetical replicase or replicase subunit cistron in the 5'-proximal part of tobacco mosaic virus (TMV) RNA yields a major 126-K protein and a minor 183-K ;readthrough' protein in vivo and in vitro. Two natural suppressor tRNAs were purified from uninfected tobacco plants on the basis of their ability to promote readthrough over the corresponding UAG termination codon in vitro. In a reticulocyte lysate the yield of 183-K readthrough protein increases from 10% in the absence of added tobacco plant tRNA up to 35% in the case of pure tRNA added. Their amino acid acceptance and anticodon sequence (GpsiA) identifies the two natural suppressor tRNAs as the two normal major cytoplasmic tyrosine-specific tRNAs. tRNA(1) has an A:U pair at the base of the TpsiC stem and an unmodified G(10), whereas tRNA(2) contains a G:C pair in the corresponding location and mG in position 10. This is the first case that, in a higher eukaryote, the complete structure is known of both the natural suppressor tRNAs and the corresponding viral RNA on which they exert their function. The corresponding codon-anticodon interaction, which is not in accordance with the wobble hypothesis, and the possible biological significance of the readthrough phenomenon is discussed.

Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Beier H
Institut für Biochemie, Universität Würzburg, Röntgenring 11, D-8700 Würzburg, FRG.
Barciszewska M
Krupp G
Mitnacht R
Gross H J
References (36)
36 references, click to expand
  1. Sequence analysis of 5'[32P] labeled mRNA and tRNA using polyacrylamide gel electrophoresis.
    Nucleic Acids Res. 1978 Jan;5(1):37-56 PMID: 25417
  2. The nucleotide sequence of formylmethionine tRNA from Mycoplasma mycoides sp. capri.
    Nucleic Acids Res. 1978 Jan;5(1):57-70 PMID: 347398
  3. Mapping adenines, guanines, and pyrimidines in RNA.
    Nucleic Acids Res. 1977 Aug;4(8):2527-38 PMID: 409999
  4. The effect of tobacco mosaic virus infection on host and virus-specific protein synthesis in protoplasts.
    Virology. 1978 Apr;85(2):494-503 PMID: 664212
  5. Characterization and in vitro translation of the RNAs from less-than-full-length, virus-related, nucleoprotein rods present in tobacco mosaic virus preparations.
    Virology. 1977 Aug;81(1):160-9 PMID: 888358
  6. Use of specific endonuclease cleavage in RNA sequencing-an enzymic method for distinguishing between cytidine and uridine residues.
    Nucleic Acids Res. 1977 Oct;4(10):3441-54 PMID: 928065
  7. Nucleotide sequence of salmon testes and salmon liver cytoplasmic initiator tRNA.
    Cell. 1975 Nov;6(3):395-405 PMID: 1053250
  8. Quantitative film detection of 3H and 14C in polyacrylamide gels by fluorography.
    Eur J Biochem. 1975 Aug 15;56(2):335-41 PMID: 1175627
  9. Replication of tobacco mosaic virus. V. Properties of the bound and solubilized replicase.
    Virology. 1973 Jun;53(2):300-11 PMID: 4712385
  10. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  11. Context effects: translation of UAG codon by suppressor tRNA is affected by the sequence following UAG in the message.
    J Mol Biol. 1983 Feb 15;164(1):73-87 PMID: 6188841
  12. Opal suppressor serine tRNAs from bovine liver form phosphoseryl-tRNA.
    Proc Natl Acad Sci U S A. 1982 Oct;79(20):6215-9 PMID: 6815648
  13. Nucleotide sequence and secondary structure of citrus exocortis and chrysanthemum stunt viroid.
    Eur J Biochem. 1982 Jan;121(2):249-57 PMID: 7060550
  14. A UGA termination suppression tRNATrp active in rabbit reticulocytes.
    Nature. 1980 Jan 3;283(5742):41-6 PMID: 7350525
  15. Ligation of endogenous tRNA 3' half molecules to their corresponding 5' halves via 2'-phosphomonoester,3',5'-phosphodiester bonds in extracts of Chlamydomonas.
    EMBO J. 1983;2(4):605-10 PMID: 16453445
  16. Translation of MuLV and MSV RNAs in nuclease-treated reticulocyte extracts: enhancement of the gag-pol polypeptide with yeast suppressor tRNA.
    Cell. 1978 Jan;13(1):189-99 PMID: 202399
  17. "Two out of three": an alternative method for codon reading.
    Proc Natl Acad Sci U S A. 1978 Apr;75(4):1759-62 PMID: 273907
  18. Yeast tRNALeu (anticodon U--A--G) translates all six leucine codons in extracts from interferon treated cells.
    FEBS Lett. 1977 Oct 1;82(1):71-6 PMID: 334566
  19. Direct chemical method for sequencing RNA.
    Proc Natl Acad Sci U S A. 1979 Apr;76(4):1760-4 PMID: 377283
  20. Leaky UAG termination codon in tobacco mosaic virus RNA.
    Nature. 1978 Mar 30;272(5652):469-71 PMID: 634374
  21. A different approach to RNA sequencing.
    Nature. 1978 Jul 6;274(5666):87-9 PMID: 662002
  22. An efficient mRNA-dependent translation system from reticulocyte lysates.
    Eur J Biochem. 1976 AUG 1;67(1):247-56 PMID: 823012
  23. Rabbit liver tRNA1Val:I. Primary structure and unusual codon recognition.
    Nucleic Acids Res. 1977 Jun;4(6):1999-2008 PMID: 896481
  24. In vitro and in vivo translation of the ribonucleic acids of a cowpea strain of tobacco mosaic virus.
    Virology. 1976 Jun;71(2):498-517 PMID: 936472
  25. Separation of transfer ribonucleic acid by sepharose chromatography using reverse salt gradients.
    Proc Natl Acad Sci U S A. 1975 Mar;72(3):1068-71 PMID: 1093164
  26. Protein synthesis in tobacco protoplasts infected with tobacco mosaic virus.
    Virology. 1975 Mar;64(1):10-22 PMID: 1114703
  27. Protein synthesis in tobacco mesophyll protoplasts induced by tobacco mosaic virus infection.
    Virology. 1974 Dec;62(2):426-33 PMID: 4432373
  28. Tryptophan transfer RNA as the UGA suppressor.
    J Mol Biol. 1971 Jun 14;58(2):439-58 PMID: 4933412
  29. A gel electrophoretic analysis of proteins from plants infected with tobacco mosaic and potato spindle tuber viruses.
    Virology. 1972 Feb;47(2):296-305 PMID: 5058832
  30. Codon--anticodon pairing: the wobble hypothesis.
    J Mol Biol. 1966 Aug;19(2):548-55 PMID: 5969078
  31. Does translational ambiguity increase during cell differentiation?
    FEBS Lett. 1982 Nov 29;149(2):167-70 PMID: 6759177
  32. Structure and properties of a bovine liver UGA suppressor serine tRNA with a tryptophan anticodon.
    Cell. 1981 Aug;25(2):497-506 PMID: 6912798
  33. Nucleotide sequence of tobacco mosaic virus RNA.
    Proc Natl Acad Sci U S A. 1982 Oct;79(19):5818-22 PMID: 6964389
  34. In vivo and in vitro translation of the RNAs of four tobamoviruses.
    Intervirology. 1980;14(5-6):292-9 PMID: 7251334
  35. Suppression of murine retrovirus polypeptide termination: effect of amber suppressor tRNA on the cell-free translation of Rauscher murine leukemia virus, Moloney murine leukemia virus, and Moloney murine sarcoma virus 124 RNA.
    J Virol. 1980 May;34(2):464-73 PMID: 7373716
  36. DNA sequence analysis: a general, simple and rapid method for sequencing large oligodeoxyribonucleotide fragments by mapping.
    Nucleic Acids Res. 1974 Mar;1(3):331-53 PMID: 10793670
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
1984-02-00
Pages
351-6
Language
English
Region
England
NLM ID
8208664
PMCID
PMC557348
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com